Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
NUP54Q7Z3B4 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
NUP54Q7Z3B4 MTND4P14-201ENST00000435799 1354 ntBASIC2.64□□□□□ -1.99
NUP54Q7Z3B4 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
NUP54Q7Z3B4 SNORA67.1-201ENST00000364749 141 ntBASIC2.64□□□□□ -1.99
NUP54Q7Z3B4 Y_RNA.381-201ENST00000365666 102 ntBASIC2.64□□□□□ -1.99
NUP54Q7Z3B4 RNU6-45P-201ENST00000384471 107 ntBASIC2.64□□□□□ -1.99
NUP54Q7Z3B4 MIR181A1-201ENST00000385026 110 ntBASIC2.64□□□□□ -1.99
NUP54Q7Z3B4 AL139095.1-201ENST00000404326 391 ntBASIC2.64□□□□□ -1.99
NUP54Q7Z3B4 U6atac.2-201ENST00000408644 118 ntBASIC2.64□□□□□ -1.99
NUP54Q7Z3B4 AL592148.1-201ENST00000413568 445 ntBASIC2.64□□□□□ -1.99
NUP54Q7Z3B4 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
NUP54Q7Z3B4 BX276092.3-201ENST00000424182 230 ntBASIC2.64□□□□□ -1.99
NUP54Q7Z3B4 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.64□□□□□ -1.99
NUP54Q7Z3B4 AL669831.1-202ENST00000428504 417 ntBASIC2.64□□□□□ -1.99
NUP54Q7Z3B4 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.64□□□□□ -1.99
NUP54Q7Z3B4 AL139132.1-201ENST00000431587 344 ntBASIC2.64□□□□□ -1.99
NUP54Q7Z3B4 FABP5P14-201ENST00000437273 393 ntBASIC2.64□□□□□ -1.99
NUP54Q7Z3B4 GTF2IP13-201ENST00000438487 386 ntBASIC2.64□□□□□ -1.99
NUP54Q7Z3B4 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.64□□□□□ -1.99
NUP54Q7Z3B4 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.64□□□□□ -1.99
NUP54Q7Z3B4 AL139109.1-201ENST00000455491 297 ntBASIC2.64□□□□□ -1.99
NUP54Q7Z3B4 BTF3P15-201ENST00000455606 336 ntBASIC2.64□□□□□ -1.99
NUP54Q7Z3B4 RPL23AP11-201ENST00000475260 469 ntBASIC2.64□□□□□ -1.99
NUP54Q7Z3B4 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.64□□□□□ -1.99
NUP54Q7Z3B4 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.64□□□□□ -1.99
NUP54Q7Z3B4 SNORA31.6-201ENST00000516241 130 ntBASIC2.64□□□□□ -1.99
NUP54Q7Z3B4 RNU6-1178P-201ENST00000516674 107 ntBASIC2.64□□□□□ -1.99
NUP54Q7Z3B4 AL137161.1-201ENST00000532231 390 ntBASIC2.64□□□□□ -1.99
NUP54Q7Z3B4 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.64□□□□□ -1.99
NUP54Q7Z3B4 HIF1AP1-201ENST00000553642 175 ntBASIC2.64□□□□□ -1.99
NUP54Q7Z3B4 AL512360.1-201ENST00000555346 234 ntBASIC2.64□□□□□ -1.99
NUP54Q7Z3B4 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.64□□□□□ -1.99
NUP54Q7Z3B4 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.64□□□□□ -1.99
NUP54Q7Z3B4 HMGB1P33-201ENST00000563485 527 ntBASIC2.64□□□□□ -1.99
NUP54Q7Z3B4 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.64□□□□□ -1.99
NUP54Q7Z3B4 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.64□□□□□ -1.99
NUP54Q7Z3B4 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
NUP54Q7Z3B4 AC073539.2-201ENST00000597113 165 ntBASIC2.64□□□□□ -1.99
NUP54Q7Z3B4 AC091152.3-201ENST00000604227 325 ntBASIC2.64□□□□□ -1.99
NUP54Q7Z3B4 AL160281.1-201ENST00000605307 311 ntBASIC2.64□□□□□ -1.99
NUP54Q7Z3B4 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.64□□□□□ -1.99
NUP54Q7Z3B4 CR381653.2-201ENST00000624041 768 ntBASIC2.64□□□□□ -1.99
NUP54Q7Z3B4 AC098679.4-201ENST00000624241 654 ntBASIC2.64□□□□□ -1.99
NUP54Q7Z3B4 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.64□□□□□ -1.99
NUP54Q7Z3B4 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
NUP54Q7Z3B4 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.64□□□□□ -1.99
NUP54Q7Z3B4 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.63□□□□□ -1.99
NUP54Q7Z3B4 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.63□□□□□ -1.99
NUP54Q7Z3B4 AL354685.2-201ENST00000448218 1447 ntBASIC2.63□□□□□ -1.99
NUP54Q7Z3B4 RNU6-898P-201ENST00000365627 104 ntBASIC2.63□□□□□ -1.99
NUP54Q7Z3B4 RNU6-1215P-201ENST00000384441 102 ntBASIC2.63□□□□□ -1.99
NUP54Q7Z3B4 RNU6-1127P-201ENST00000384580 107 ntBASIC2.63□□□□□ -1.99
NUP54Q7Z3B4 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
NUP54Q7Z3B4 SNORD88.1-201ENST00000408684 91 ntBASIC2.63□□□□□ -1.99
NUP54Q7Z3B4 RNU6-607P-201ENST00000411283 108 ntBASIC2.63□□□□□ -1.99
NUP54Q7Z3B4 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.63□□□□□ -1.99
NUP54Q7Z3B4 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.63□□□□□ -1.99
NUP54Q7Z3B4 RPL39P40-201ENST00000445481 146 ntBASIC2.63□□□□□ -1.99
NUP54Q7Z3B4 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.63□□□□□ -1.99
NUP54Q7Z3B4 AL121769.1-201ENST00000469473 401 ntBASIC2.63□□□□□ -1.99
NUP54Q7Z3B4 RPS29P26-201ENST00000477483 171 ntBASIC2.63□□□□□ -1.99
NUP54Q7Z3B4 MTCO3P9-201ENST00000506989 781 ntBASIC2.63□□□□□ -1.99
NUP54Q7Z3B4 RNU6-314P-201ENST00000516574 104 ntBASIC2.63□□□□□ -1.99
NUP54Q7Z3B4 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.63□□□□□ -1.99
NUP54Q7Z3B4 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.63□□□□□ -1.99
NUP54Q7Z3B4 ZNF519P2-201ENST00000557032 169 ntBASIC2.63□□□□□ -1.99
NUP54Q7Z3B4 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.63□□□□□ -1.99
NUP54Q7Z3B4 AC092325.1-201ENST00000566449 554 ntBASIC2.63□□□□□ -1.99
NUP54Q7Z3B4 LRRC37A5P-203ENST00000580181 585 ntBASIC2.63□□□□□ -1.99
NUP54Q7Z3B4 AC005261.5-201ENST00000596280 355 ntBASIC2.63□□□□□ -1.99
NUP54Q7Z3B4 AC008121.1-201ENST00000603244 268 ntBASIC2.63□□□□□ -1.99
NUP54Q7Z3B4 AC093788.1-201ENST00000609356 927 ntBASIC2.63□□□□□ -1.99
NUP54Q7Z3B4 RMST_4.1-201ENST00000616886 107 ntBASIC2.63□□□□□ -1.99
NUP54Q7Z3B4 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.63□□□□□ -1.99
NUP54Q7Z3B4 MIR203B-201ENST00000636080 86 ntBASIC2.63□□□□□ -1.99
NUP54Q7Z3B4 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.63□□□□□ -1.99
NUP54Q7Z3B4 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
NUP54Q7Z3B4 RNU6-525P-201ENST00000363685 104 ntBASIC2.62□□□□□ -1.99
NUP54Q7Z3B4 RNU6-384P-201ENST00000364900 104 ntBASIC2.62□□□□□ -1.99
NUP54Q7Z3B4 SNORA69-201ENST00000383895 132 ntBASIC2.62□□□□□ -1.99
NUP54Q7Z3B4 RNU1-52P-201ENST00000384190 164 ntBASIC2.62□□□□□ -1.99
NUP54Q7Z3B4 RNU6-393P-201ENST00000384475 107 ntBASIC2.62□□□□□ -1.99
NUP54Q7Z3B4 Y_RNA.516-201ENST00000384541 124 ntBASIC2.62□□□□□ -1.99
NUP54Q7Z3B4 RNU6-748P-201ENST00000384648 107 ntBASIC2.62□□□□□ -1.99
NUP54Q7Z3B4 MIR512-1-201ENST00000384913 84 ntBASIC2.62□□□□□ -1.99
NUP54Q7Z3B4 MIR34A-201ENST00000385130 110 ntBASIC2.62□□□□□ -1.99
NUP54Q7Z3B4 RPL17P50-201ENST00000396131 546 ntBASIC2.62□□□□□ -1.99
NUP54Q7Z3B4 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.62□□□□□ -1.99
NUP54Q7Z3B4 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.62□□□□□ -1.99
NUP54Q7Z3B4 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.62□□□□□ -1.99
NUP54Q7Z3B4 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.62□□□□□ -1.99
NUP54Q7Z3B4 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.62□□□□□ -1.99
NUP54Q7Z3B4 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.62□□□□□ -1.99
NUP54Q7Z3B4 AC092001.1-201ENST00000453012 261 ntBASIC2.62□□□□□ -1.99
NUP54Q7Z3B4 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.62□□□□□ -1.99
NUP54Q7Z3B4 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.62□□□□□ -1.99
NUP54Q7Z3B4 SCARNA18-201ENST00000459004 134 ntBASIC2.62□□□□□ -1.99
NUP54Q7Z3B4 RNU7-180P-201ENST00000459240 63 ntBASIC2.62□□□□□ -1.99
NUP54Q7Z3B4 MRPL42P6-201ENST00000486397 371 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms