Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 AC091826.1-201ENST00000514065 313 ntBASIC3.26□□□□□ -1.89
SYNE3Q6ZMZ3 Y_RNA.665-201ENST00000516177 98 ntBASIC3.26□□□□□ -1.89
SYNE3Q6ZMZ3 SNORA31.19-201ENST00000517079 126 ntBASIC3.26□□□□□ -1.89
SYNE3Q6ZMZ3 AF235103.2-201ENST00000525753 346 ntBASIC3.26□□□□□ -1.89
SYNE3Q6ZMZ3 HSPE1P20-201ENST00000538133 289 ntBASIC3.26□□□□□ -1.89
SYNE3Q6ZMZ3 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.26□□□□□ -1.89
SYNE3Q6ZMZ3 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.26□□□□□ -1.89
SYNE3Q6ZMZ3 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.26□□□□□ -1.89
SYNE3Q6ZMZ3 MTND4P35-201ENST00000604257 1375 ntBASIC3.25□□□□□ -1.89
SYNE3Q6ZMZ3 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SYNE3Q6ZMZ3 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SYNE3Q6ZMZ3 SNORD3E-201ENST00000362899 217 ntBASIC3.25□□□□□ -1.89
SYNE3Q6ZMZ3 RNU6-525P-201ENST00000363685 104 ntBASIC3.25□□□□□ -1.89
SYNE3Q6ZMZ3 RNU4-66P-201ENST00000365199 138 ntBASIC3.25□□□□□ -1.89
SYNE3Q6ZMZ3 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.25□□□□□ -1.89
SYNE3Q6ZMZ3 Z98749.2-208ENST00000381646 500 ntBASIC3.25□□□□□ -1.89
SYNE3Q6ZMZ3 RNU6-1027P-201ENST00000383998 107 ntBASIC3.25□□□□□ -1.89
SYNE3Q6ZMZ3 SNORA18.3-201ENST00000384122 132 ntBASIC3.25□□□□□ -1.89
SYNE3Q6ZMZ3 RNU6-198P-201ENST00000384258 104 ntBASIC3.25□□□□□ -1.89
SYNE3Q6ZMZ3 SNORD37.1-201ENST00000390968 65 ntBASIC3.25□□□□□ -1.89
SYNE3Q6ZMZ3 Z92545.1-201ENST00000411782 234 ntBASIC3.25□□□□□ -1.89
SYNE3Q6ZMZ3 AL592148.1-201ENST00000413568 445 ntBASIC3.25□□□□□ -1.89
SYNE3Q6ZMZ3 CYCSP33-201ENST00000414485 327 ntBASIC3.25□□□□□ -1.89
SYNE3Q6ZMZ3 RPL21P90-201ENST00000415692 466 ntBASIC3.25□□□□□ -1.89
SYNE3Q6ZMZ3 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.25□□□□□ -1.89
SYNE3Q6ZMZ3 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.25□□□□□ -1.89
SYNE3Q6ZMZ3 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.25□□□□□ -1.89
SYNE3Q6ZMZ3 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.25□□□□□ -1.89
SYNE3Q6ZMZ3 DYNLL1P5-201ENST00000467158 270 ntBASIC3.25□□□□□ -1.89
SYNE3Q6ZMZ3 RPL21P99-201ENST00000480369 423 ntBASIC3.25□□□□□ -1.89
SYNE3Q6ZMZ3 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.25□□□□□ -1.89
SYNE3Q6ZMZ3 PRDX4P1-201ENST00000507189 574 ntBASIC3.25□□□□□ -1.89
SYNE3Q6ZMZ3 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.25□□□□□ -1.89
SYNE3Q6ZMZ3 RNU1-103P-201ENST00000516502 125 ntBASIC3.25□□□□□ -1.89
SYNE3Q6ZMZ3 RNA5SP367-201ENST00000516557 118 ntBASIC3.25□□□□□ -1.89
SYNE3Q6ZMZ3 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.25□□□□□ -1.89
SYNE3Q6ZMZ3 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.25□□□□□ -1.89
SYNE3Q6ZMZ3 CYCSP39-201ENST00000565821 309 ntBASIC3.25□□□□□ -1.89
SYNE3Q6ZMZ3 BNIP3P25-201ENST00000596023 559 ntBASIC3.25□□□□□ -1.89
SYNE3Q6ZMZ3 RPL23AP88-201ENST00000605759 454 ntBASIC3.25□□□□□ -1.89
SYNE3Q6ZMZ3 AC099654.14-201ENST00000638599 341 ntBASIC3.25□□□□□ -1.89
SYNE3Q6ZMZ3 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.25□□□□□ -1.89
SYNE3Q6ZMZ3 AP003122.5-201ENST00000527668 3766 ntBASIC3.25□□□□□ -1.89
SYNE3Q6ZMZ3 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
SYNE3Q6ZMZ3 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SYNE3Q6ZMZ3 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
SYNE3Q6ZMZ3 RNU6-384P-201ENST00000364900 104 ntBASIC3.24□□□□□ -1.89
SYNE3Q6ZMZ3 CD24P4-201ENST00000382840 243 ntBASIC3.24□□□□□ -1.89
SYNE3Q6ZMZ3 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
SYNE3Q6ZMZ3 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
SYNE3Q6ZMZ3 MIR1289-1-201ENST00000408836 144 ntBASIC3.24□□□□□ -1.89
SYNE3Q6ZMZ3 Y_RNA.623-201ENST00000411128 95 ntBASIC3.24□□□□□ -1.89
SYNE3Q6ZMZ3 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.24□□□□□ -1.89
SYNE3Q6ZMZ3 BPY2DP-201ENST00000422208 265 ntBASIC3.24□□□□□ -1.89
SYNE3Q6ZMZ3 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.24□□□□□ -1.89
SYNE3Q6ZMZ3 AL365496.1-201ENST00000426885 215 ntBASIC3.24□□□□□ -1.89
SYNE3Q6ZMZ3 AL627311.1-201ENST00000431514 115 ntBASIC3.24□□□□□ -1.89
SYNE3Q6ZMZ3 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.24□□□□□ -1.89
SYNE3Q6ZMZ3 AC098831.1-201ENST00000440661 216 ntBASIC3.24□□□□□ -1.89
SYNE3Q6ZMZ3 AL135938.1-201ENST00000443141 297 ntBASIC3.24□□□□□ -1.89
SYNE3Q6ZMZ3 AL078601.1-201ENST00000444542 271 ntBASIC3.24□□□□□ -1.89
SYNE3Q6ZMZ3 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.24□□□□□ -1.89
SYNE3Q6ZMZ3 AC092798.1-201ENST00000458542 409 ntBASIC3.24□□□□□ -1.89
SYNE3Q6ZMZ3 snoU13.28-201ENST00000459235 104 ntBASIC3.24□□□□□ -1.89
SYNE3Q6ZMZ3 AC003982.1-202ENST00000469928 248 ntBASIC3.24□□□□□ -1.89
SYNE3Q6ZMZ3 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.24□□□□□ -1.89
SYNE3Q6ZMZ3 HMGB1P30-201ENST00000492455 606 ntBASIC3.24□□□□□ -1.89
SYNE3Q6ZMZ3 AC079140.5-201ENST00000507882 310 ntBASIC3.24□□□□□ -1.89
SYNE3Q6ZMZ3 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SYNE3Q6ZMZ3 RNU1-86P-201ENST00000516108 154 ntBASIC3.24□□□□□ -1.89
SYNE3Q6ZMZ3 RNU1-107P-201ENST00000516617 154 ntBASIC3.24□□□□□ -1.89
SYNE3Q6ZMZ3 RNU6-572P-201ENST00000516724 80 ntBASIC3.24□□□□□ -1.89
SYNE3Q6ZMZ3 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.24□□□□□ -1.89
SYNE3Q6ZMZ3 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.24□□□□□ -1.89
SYNE3Q6ZMZ3 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.24□□□□□ -1.89
SYNE3Q6ZMZ3 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.24□□□□□ -1.89
SYNE3Q6ZMZ3 AC092807.2-201ENST00000609367 243 ntBASIC3.24□□□□□ -1.89
SYNE3Q6ZMZ3 AC107871.2-201ENST00000612894 502 ntBASIC3.24□□□□□ -1.89
SYNE3Q6ZMZ3 WT1-AS_8.1-201ENST00000615200 275 ntBASIC3.24□□□□□ -1.89
SYNE3Q6ZMZ3 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.24□□□□□ -1.89
SYNE3Q6ZMZ3 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SYNE3Q6ZMZ3 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SYNE3Q6ZMZ3 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.23□□□□□ -1.89
SYNE3Q6ZMZ3 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SYNE3Q6ZMZ3 Y_RNA.88-201ENST00000363029 99 ntBASIC3.23□□□□□ -1.89
SYNE3Q6ZMZ3 Y_RNA.378-201ENST00000365652 113 ntBASIC3.23□□□□□ -1.89
SYNE3Q6ZMZ3 Y_RNA.390-201ENST00000383932 102 ntBASIC3.23□□□□□ -1.89
SYNE3Q6ZMZ3 Y_RNA.480-201ENST00000384364 102 ntBASIC3.23□□□□□ -1.89
SYNE3Q6ZMZ3 MIR518D-201ENST00000385014 87 ntBASIC3.23□□□□□ -1.89
SYNE3Q6ZMZ3 RPL19P1-201ENST00000411635 428 ntBASIC3.23□□□□□ -1.89
SYNE3Q6ZMZ3 POLHP1-201ENST00000411806 470 ntBASIC3.23□□□□□ -1.89
SYNE3Q6ZMZ3 RPLP0P7-201ENST00000416050 667 ntBASIC3.23□□□□□ -1.89
SYNE3Q6ZMZ3 AL139413.1-201ENST00000421309 217 ntBASIC3.23□□□□□ -1.89
SYNE3Q6ZMZ3 AL353729.1-201ENST00000425044 720 ntBASIC3.23□□□□□ -1.89
SYNE3Q6ZMZ3 AC114786.4-201ENST00000508771 728 ntBASIC3.23□□□□□ -1.89
SYNE3Q6ZMZ3 MTND3P25-201ENST00000509243 135 ntBASIC3.23□□□□□ -1.89
SYNE3Q6ZMZ3 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.23□□□□□ -1.89
SYNE3Q6ZMZ3 RNA5SP76-201ENST00000516277 87 ntBASIC3.23□□□□□ -1.89
SYNE3Q6ZMZ3 RNU6-1183P-201ENST00000517054 60 ntBASIC3.23□□□□□ -1.89
SYNE3Q6ZMZ3 SNORA25.17-201ENST00000517184 124 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms