Protein–RNA interactions for Protein: Q6TFL3

CCDC171, Coiled-coil domain-containing protein 171, humanhuman

Predictions only

Length 1,326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171Q6TFL3 ELOCP14-201ENST00000428070 331 ntBASIC0.81□□□□□ -2.28
CCDC171Q6TFL3 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.81□□□□□ -2.28
CCDC171Q6TFL3 MTND5P15-201ENST00000434246 349 ntBASIC0.81□□□□□ -2.28
CCDC171Q6TFL3 ELOCP7-201ENST00000439968 331 ntBASIC0.81□□□□□ -2.28
CCDC171Q6TFL3 USP9YP17-201ENST00000444617 696 ntBASIC0.81□□□□□ -2.28
CCDC171Q6TFL3 AC112771.1-201ENST00000463581 102 ntBASIC0.81□□□□□ -2.28
CCDC171Q6TFL3 AP001025.1-201ENST00000486139 332 ntBASIC0.81□□□□□ -2.28
CCDC171Q6TFL3 RNU6-405P-201ENST00000516637 110 ntBASIC0.81□□□□□ -2.28
CCDC171Q6TFL3 RNU6-467P-201ENST00000517027 110 ntBASIC0.81□□□□□ -2.28
CCDC171Q6TFL3 RNA5SP404-201ENST00000517118 132 ntBASIC0.81□□□□□ -2.28
CCDC171Q6TFL3 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.81□□□□□ -2.28
CCDC171Q6TFL3 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.81□□□□□ -2.28
CCDC171Q6TFL3 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.81□□□□□ -2.28
CCDC171Q6TFL3 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC0.81□□□□□ -2.28
CCDC171Q6TFL3 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC0.81□□□□□ -2.28
CCDC171Q6TFL3 BNIP3P27-201ENST00000599991 412 ntBASIC0.81□□□□□ -2.28
CCDC171Q6TFL3 BBIP1P1-201ENST00000602999 279 ntBASIC0.81□□□□□ -2.28
CCDC171Q6TFL3 AL022345.1-201ENST00000607292 135 ntBASIC0.81□□□□□ -2.28
CCDC171Q6TFL3 NACAP2-201ENST00000318548 624 ntBASIC0.8□□□□□ -2.28
CCDC171Q6TFL3 RNA5SP327-201ENST00000362494 101 ntBASIC0.8□□□□□ -2.28
CCDC171Q6TFL3 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
CCDC171Q6TFL3 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
CCDC171Q6TFL3 TMSB4XP8-201ENST00000402089 135 ntBASIC0.8□□□□□ -2.28
CCDC171Q6TFL3 AL133264.1-201ENST00000407157 562 ntBASIC0.8□□□□□ -2.28
CCDC171Q6TFL3 TMSB4XP6-201ENST00000415187 135 ntBASIC0.8□□□□□ -2.28
CCDC171Q6TFL3 AC007435.1-201ENST00000421086 415 ntBASIC0.8□□□□□ -2.28
CCDC171Q6TFL3 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.8□□□□□ -2.28
CCDC171Q6TFL3 TMSB4XP1-201ENST00000424567 135 ntBASIC0.8□□□□□ -2.28
CCDC171Q6TFL3 AC234064.1-201ENST00000436312 247 ntBASIC0.8□□□□□ -2.28
CCDC171Q6TFL3 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC0.8□□□□□ -2.28
CCDC171Q6TFL3 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC0.8□□□□□ -2.28
CCDC171Q6TFL3 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.8□□□□□ -2.28
CCDC171Q6TFL3 AL355598.1-201ENST00000604169 202 ntBASIC0.8□□□□□ -2.28
CCDC171Q6TFL3 AC011451.2-201ENST00000604303 598 ntBASIC0.8□□□□□ -2.28
CCDC171Q6TFL3 AC106800.4-201ENST00000614905 153 ntBASIC0.8□□□□□ -2.28
CCDC171Q6TFL3 AL078604.3-201ENST00000615580 211 ntBASIC0.8□□□□□ -2.28
CCDC171Q6TFL3 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.8□□□□□ -2.28
CCDC171Q6TFL3 AC008163.1-202ENST00000636004 2889 ntBASIC0.8□□□□□ -2.28
CCDC171Q6TFL3 AC092125.1-201ENST00000562568 1995 ntBASIC0.8□□□□□ -2.28
CCDC171Q6TFL3 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.79□□□□□ -2.28
CCDC171Q6TFL3 HAUS6P2-201ENST00000433254 2404 ntBASIC0.79□□□□□ -2.28
CCDC171Q6TFL3 MIR302D-201ENST00000362275 68 ntBASIC0.79□□□□□ -2.28
CCDC171Q6TFL3 SNORA29-201ENST00000384183 140 ntBASIC0.79□□□□□ -2.28
CCDC171Q6TFL3 Y_RNA.548-201ENST00000384656 105 ntBASIC0.79□□□□□ -2.28
CCDC171Q6TFL3 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
CCDC171Q6TFL3 AC092634.6-201ENST00000418558 192 ntBASIC0.79□□□□□ -2.28
CCDC171Q6TFL3 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.79□□□□□ -2.28
CCDC171Q6TFL3 MTND4P24-201ENST00000424002 397 ntBASIC0.79□□□□□ -2.28
CCDC171Q6TFL3 AC139712.2-201ENST00000424302 339 ntBASIC0.79□□□□□ -2.28
CCDC171Q6TFL3 AL445305.1-201ENST00000432577 575 ntBASIC0.79□□□□□ -2.28
CCDC171Q6TFL3 UBE2V2P3-201ENST00000433562 437 ntBASIC0.79□□□□□ -2.28
CCDC171Q6TFL3 RNU6-1132P-201ENST00000459214 107 ntBASIC0.79□□□□□ -2.28
CCDC171Q6TFL3 MEMO1P3-201ENST00000459811 302 ntBASIC0.79□□□□□ -2.28
CCDC171Q6TFL3 RPL21P47-201ENST00000483696 477 ntBASIC0.79□□□□□ -2.28
CCDC171Q6TFL3 AC011005.2-201ENST00000487324 359 ntBASIC0.79□□□□□ -2.28
CCDC171Q6TFL3 AC118282.2-201ENST00000508739 374 ntBASIC0.79□□□□□ -2.28
CCDC171Q6TFL3 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC0.79□□□□□ -2.28
CCDC171Q6TFL3 RNA5SP436-201ENST00000516020 115 ntBASIC0.79□□□□□ -2.28
CCDC171Q6TFL3 RNU6-581P-201ENST00000516214 105 ntBASIC0.79□□□□□ -2.28
CCDC171Q6TFL3 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC0.79□□□□□ -2.28
CCDC171Q6TFL3 AC133794.1-201ENST00000602731 914 ntBASIC0.79□□□□□ -2.28
CCDC171Q6TFL3 AC087045.1-201ENST00000605856 382 ntBASIC0.79□□□□□ -2.28
CCDC171Q6TFL3 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.79□□□□□ -2.28
CCDC171Q6TFL3 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC0.79□□□□□ -2.28
CCDC171Q6TFL3 RNU6-1164P-201ENST00000364428 107 ntBASIC0.78□□□□□ -2.28
CCDC171Q6TFL3 Y_RNA.245-201ENST00000364493 95 ntBASIC0.78□□□□□ -2.28
CCDC171Q6TFL3 RNU6-611P-201ENST00000384276 104 ntBASIC0.78□□□□□ -2.28
CCDC171Q6TFL3 RNU6-342P-201ENST00000384521 104 ntBASIC0.78□□□□□ -2.28
CCDC171Q6TFL3 RNU6-796P-201ENST00000391086 107 ntBASIC0.78□□□□□ -2.28
CCDC171Q6TFL3 RNU2-48P-201ENST00000410694 191 ntBASIC0.78□□□□□ -2.28
CCDC171Q6TFL3 MTATP6P27-201ENST00000416987 621 ntBASIC0.78□□□□□ -2.28
CCDC171Q6TFL3 MTCO3P1-205ENST00000422088 832 ntBASIC0.78□□□□□ -2.28
CCDC171Q6TFL3 MTND2P6-201ENST00000455337 1030 ntBASIC0.78□□□□□ -2.28
CCDC171Q6TFL3 AC108729.1-201ENST00000487812 947 ntBASIC0.78□□□□□ -2.28
CCDC171Q6TFL3 AC109927.2-201ENST00000506416 303 ntBASIC0.78□□□□□ -2.28
CCDC171Q6TFL3 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC0.78□□□□□ -2.28
CCDC171Q6TFL3 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC0.78□□□□□ -2.28
CCDC171Q6TFL3 AC004812.1-201ENST00000540773 146 ntBASIC0.78□□□□□ -2.28
CCDC171Q6TFL3 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.78□□□□□ -2.28
CCDC171Q6TFL3 AC012414.2-201ENST00000559474 187 ntBASIC0.78□□□□□ -2.28
CCDC171Q6TFL3 RMST_10.1-201ENST00000616309 154 ntBASIC0.78□□□□□ -2.28
CCDC171Q6TFL3 MIR1264-201ENST00000616374 69 ntBASIC0.78□□□□□ -2.28
CCDC171Q6TFL3 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.78□□□□□ -2.28
CCDC171Q6TFL3 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.78□□□□□ -2.28
CCDC171Q6TFL3 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
CCDC171Q6TFL3 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.77□□□□□ -2.29
CCDC171Q6TFL3 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
CCDC171Q6TFL3 MTND1P28-201ENST00000435623 950 ntBASIC0.77□□□□□ -2.29
CCDC171Q6TFL3 RPS15AP9-201ENST00000439856 381 ntBASIC0.77□□□□□ -2.29
CCDC171Q6TFL3 AC002542.1-201ENST00000440683 193 ntBASIC0.77□□□□□ -2.29
CCDC171Q6TFL3 HGF-207ENST00000453018 721 ntTSL 3 BASIC0.77□□□□□ -2.29
CCDC171Q6TFL3 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC0.77□□□□□ -2.29
CCDC171Q6TFL3 RNU6-678P-201ENST00000516832 109 ntBASIC0.77□□□□□ -2.29
CCDC171Q6TFL3 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.77□□□□□ -2.29
CCDC171Q6TFL3 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC0.77□□□□□ -2.29
CCDC171Q6TFL3 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.77□□□□□ -2.29
CCDC171Q6TFL3 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC0.77□□□□□ -2.29
CCDC171Q6TFL3 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC0.77□□□□□ -2.29
CCDC171Q6TFL3 SUB1P4-201ENST00000566062 339 ntBASIC0.77□□□□□ -2.29
CCDC171Q6TFL3 SNORA77B-201ENST00000578179 125 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms