Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 TOMM22P6-201ENST00000465035 409 ntBASIC4.43□□□□□ -1.7
RNF43Q68DV7 AC010683.1-201ENST00000473673 378 ntBASIC4.43□□□□□ -1.7
RNF43Q68DV7 RPS26P21-201ENST00000475397 348 ntBASIC4.43□□□□□ -1.7
RNF43Q68DV7 TRAPPC2P7-201ENST00000509650 231 ntBASIC4.43□□□□□ -1.7
RNF43Q68DV7 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.43□□□□□ -1.7
RNF43Q68DV7 APOOP4-201ENST00000513530 597 ntBASIC4.43□□□□□ -1.7
RNF43Q68DV7 Y_RNA.777-201ENST00000516982 102 ntBASIC4.43□□□□□ -1.7
RNF43Q68DV7 RNU6-1315P-201ENST00000517187 99 ntBASIC4.43□□□□□ -1.7
RNF43Q68DV7 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.43□□□□□ -1.7
RNF43Q68DV7 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RNF43Q68DV7 HMGB1P14-201ENST00000557424 591 ntBASIC4.43□□□□□ -1.7
RNF43Q68DV7 FAM60BP-201ENST00000578364 658 ntBASIC4.43□□□□□ -1.7
RNF43Q68DV7 MIR4308-201ENST00000580634 81 ntBASIC4.43□□□□□ -1.7
RNF43Q68DV7 Y_RNA.771-201ENST00000598668 102 ntBASIC4.43□□□□□ -1.7
RNF43Q68DV7 AL160290.3-201ENST00000604869 165 ntBASIC4.43□□□□□ -1.7
RNF43Q68DV7 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.43□□□□□ -1.7
RNF43Q68DV7 Y_RNA.789-201ENST00000622480 102 ntBASIC4.43□□□□□ -1.7
RNF43Q68DV7 MTND1P7-201ENST00000632801 297 ntBASIC4.43□□□□□ -1.7
RNF43Q68DV7 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RNF43Q68DV7 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.43□□□□□ -1.7
RNF43Q68DV7 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.43□□□□□ -1.7
RNF43Q68DV7 AC018529.3-201ENST00000624212 2254 ntBASIC4.43□□□□□ -1.7
RNF43Q68DV7 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
RNF43Q68DV7 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
RNF43Q68DV7 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RNF43Q68DV7 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.42□□□□□ -1.7
RNF43Q68DV7 UBE2L2-201ENST00000254302 429 ntBASIC4.42□□□□□ -1.7
RNF43Q68DV7 SNORA25.1-201ENST00000362326 128 ntBASIC4.42□□□□□ -1.7
RNF43Q68DV7 Y_RNA.308-201ENST00000365043 101 ntBASIC4.42□□□□□ -1.7
RNF43Q68DV7 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RNF43Q68DV7 Y_RNA.568-201ENST00000384742 113 ntBASIC4.42□□□□□ -1.7
RNF43Q68DV7 RNU6ATAC-201ENST00000408749 126 ntBASIC4.42□□□□□ -1.7
RNF43Q68DV7 RNU5E-9P-201ENST00000411164 104 ntBASIC4.42□□□□□ -1.7
RNF43Q68DV7 AL117339.3-201ENST00000418733 162 ntBASIC4.42□□□□□ -1.7
RNF43Q68DV7 AL162725.1-201ENST00000435405 301 ntBASIC4.42□□□□□ -1.7
RNF43Q68DV7 HSPD1P21-201ENST00000436541 245 ntBASIC4.42□□□□□ -1.7
RNF43Q68DV7 RPS29P27-201ENST00000463711 170 ntBASIC4.42□□□□□ -1.7
RNF43Q68DV7 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.42□□□□□ -1.7
RNF43Q68DV7 RPL23AP45-201ENST00000476406 468 ntBASIC4.42□□□□□ -1.7
RNF43Q68DV7 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.42□□□□□ -1.7
RNF43Q68DV7 SNORA31.22-201ENST00000517204 135 ntBASIC4.42□□□□□ -1.7
RNF43Q68DV7 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC4.42□□□□□ -1.7
RNF43Q68DV7 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC4.42□□□□□ -1.7
RNF43Q68DV7 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
RNF43Q68DV7 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.42□□□□□ -1.7
RNF43Q68DV7 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
RNF43Q68DV7 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
RNF43Q68DV7 NCAPGP1-201ENST00000505112 1814 ntBASIC4.42□□□□□ -1.7
RNF43Q68DV7 AC090971.4-201ENST00000560291 1800 ntBASIC4.42□□□□□ -1.7
RNF43Q68DV7 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
RNF43Q68DV7 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
RNF43Q68DV7 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RNF43Q68DV7 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC4.41□□□□□ -1.7
RNF43Q68DV7 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RNF43Q68DV7 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RNF43Q68DV7 RNA5SP175-201ENST00000364275 119 ntBASIC4.41□□□□□ -1.7
RNF43Q68DV7 RNU6-215P-201ENST00000365169 102 ntBASIC4.41□□□□□ -1.7
RNF43Q68DV7 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
RNF43Q68DV7 RNU6-44P-201ENST00000384045 107 ntBASIC4.41□□□□□ -1.7
RNF43Q68DV7 Y_RNA.435-201ENST00000384095 112 ntBASIC4.41□□□□□ -1.7
RNF43Q68DV7 RNU6-658P-201ENST00000384606 106 ntBASIC4.41□□□□□ -1.7
RNF43Q68DV7 Y_RNA.580-201ENST00000391004 95 ntBASIC4.41□□□□□ -1.7
RNF43Q68DV7 RPS20P14-201ENST00000412545 360 ntBASIC4.41□□□□□ -1.7
RNF43Q68DV7 CRYBB2P1-203ENST00000415709 538 ntBASIC4.41□□□□□ -1.7
RNF43Q68DV7 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.41□□□□□ -1.7
RNF43Q68DV7 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.41□□□□□ -1.7
RNF43Q68DV7 AL162151.2-201ENST00000448875 158 ntBASIC4.41□□□□□ -1.7
RNF43Q68DV7 RNA5SP246-201ENST00000458909 119 ntBASIC4.41□□□□□ -1.7
RNF43Q68DV7 RPL35AP15-201ENST00000468042 339 ntBASIC4.41□□□□□ -1.7
RNF43Q68DV7 RN7SL585P-201ENST00000470538 280 ntBASIC4.41□□□□□ -1.7
RNF43Q68DV7 RPL30P1-201ENST00000488676 339 ntBASIC4.41□□□□□ -1.7
RNF43Q68DV7 AC104164.2-201ENST00000496953 495 ntBASIC4.41□□□□□ -1.7
RNF43Q68DV7 AC146944.2-203ENST00000502493 354 ntBASIC4.41□□□□□ -1.7
RNF43Q68DV7 AK3P2-201ENST00000507976 429 ntBASIC4.41□□□□□ -1.7
RNF43Q68DV7 AC139495.1-202ENST00000513164 354 ntBASIC4.41□□□□□ -1.7
RNF43Q68DV7 AC099522.1-202ENST00000514718 367 ntBASIC4.41□□□□□ -1.7
RNF43Q68DV7 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.41□□□□□ -1.7
RNF43Q68DV7 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.41□□□□□ -1.7
RNF43Q68DV7 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.41□□□□□ -1.7
RNF43Q68DV7 AC107918.3-201ENST00000533272 382 ntBASIC4.41□□□□□ -1.7
RNF43Q68DV7 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.41□□□□□ -1.7
RNF43Q68DV7 AC107016.1-201ENST00000550463 337 ntBASIC4.41□□□□□ -1.7
RNF43Q68DV7 AL157871.3-201ENST00000557231 293 ntBASIC4.41□□□□□ -1.7
RNF43Q68DV7 AL360157.1-201ENST00000565962 87 ntBASIC4.41□□□□□ -1.7
RNF43Q68DV7 RN7SL600P-201ENST00000581811 299 ntBASIC4.41□□□□□ -1.7
RNF43Q68DV7 SRGNP1-201ENST00000603392 451 ntBASIC4.41□□□□□ -1.7
RNF43Q68DV7 AC084757.4-201ENST00000616350 526 ntBASIC4.41□□□□□ -1.7
RNF43Q68DV7 MIR6875-201ENST00000617506 72 ntBASIC4.41□□□□□ -1.7
RNF43Q68DV7 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RNF43Q68DV7 MIR4275-201ENST00000636486 87 ntBASIC4.41□□□□□ -1.7
RNF43Q68DV7 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.41□□□□□ -1.7
RNF43Q68DV7 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
RNF43Q68DV7 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
RNF43Q68DV7 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RNF43Q68DV7 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RNF43Q68DV7 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RNF43Q68DV7 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RNF43Q68DV7 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
RNF43Q68DV7 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
RNF43Q68DV7 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.4□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms