Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC178Q5BJE1 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.85□□□□□ -1.79
CCDC178Q5BJE1 RNU6-50P-201ENST00000362356 103 ntBASIC3.85□□□□□ -1.79
CCDC178Q5BJE1 SNORD62.1-201ENST00000362541 86 ntBASIC3.85□□□□□ -1.79
CCDC178Q5BJE1 Y_RNA.31-201ENST00000362574 102 ntBASIC3.85□□□□□ -1.79
CCDC178Q5BJE1 SNORA31-201ENST00000362607 130 ntBASIC3.85□□□□□ -1.79
CCDC178Q5BJE1 Y_RNA.197-201ENST00000364004 102 ntBASIC3.85□□□□□ -1.79
CCDC178Q5BJE1 RNU6-741P-201ENST00000383889 107 ntBASIC3.85□□□□□ -1.79
CCDC178Q5BJE1 SNORA75B-201ENST00000384053 137 ntBASIC3.85□□□□□ -1.79
CCDC178Q5BJE1 MIR606-201ENST00000384851 96 ntBASIC3.85□□□□□ -1.79
CCDC178Q5BJE1 AL445529.1-201ENST00000398713 389 ntBASIC3.85□□□□□ -1.79
CCDC178Q5BJE1 RNA5SP129-201ENST00000410276 118 ntBASIC3.85□□□□□ -1.79
CCDC178Q5BJE1 Y_RNA.594-201ENST00000410373 140 ntBASIC3.85□□□□□ -1.79
CCDC178Q5BJE1 RNU6-1050P-201ENST00000410388 107 ntBASIC3.85□□□□□ -1.79
CCDC178Q5BJE1 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.85□□□□□ -1.79
CCDC178Q5BJE1 CYCSP33-201ENST00000414485 327 ntBASIC3.85□□□□□ -1.79
CCDC178Q5BJE1 AL353621.1-201ENST00000418219 243 ntBASIC3.85□□□□□ -1.79
CCDC178Q5BJE1 PGBD4P6-201ENST00000421501 610 ntBASIC3.85□□□□□ -1.79
CCDC178Q5BJE1 AC236972.1-201ENST00000433225 199 ntBASIC3.85□□□□□ -1.79
CCDC178Q5BJE1 AC092573.2-201ENST00000434546 243 ntBASIC3.85□□□□□ -1.79
CCDC178Q5BJE1 HIGD1AP11-201ENST00000438361 280 ntBASIC3.85□□□□□ -1.79
CCDC178Q5BJE1 RNU7-187P-201ENST00000458985 68 ntBASIC3.85□□□□□ -1.79
CCDC178Q5BJE1 AL163540.1-201ENST00000485382 386 ntBASIC3.85□□□□□ -1.79
CCDC178Q5BJE1 AC139453.3-201ENST00000493276 369 ntBASIC3.85□□□□□ -1.79
CCDC178Q5BJE1 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.85□□□□□ -1.79
CCDC178Q5BJE1 Y_RNA.670-201ENST00000516255 105 ntBASIC3.85□□□□□ -1.79
CCDC178Q5BJE1 MIR892C-201ENST00000516410 77 ntBASIC3.85□□□□□ -1.79
CCDC178Q5BJE1 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.85□□□□□ -1.79
CCDC178Q5BJE1 Y_RNA.708-201ENST00000516950 96 ntBASIC3.85□□□□□ -1.79
CCDC178Q5BJE1 RNA5SP165-201ENST00000517142 115 ntBASIC3.85□□□□□ -1.79
CCDC178Q5BJE1 NDUFB9P3-201ENST00000521269 501 ntBASIC3.85□□□□□ -1.79
CCDC178Q5BJE1 AC006504.6-201ENST00000590142 199 ntBASIC3.85□□□□□ -1.79
CCDC178Q5BJE1 AL162713.1-201ENST00000604480 262 ntBASIC3.85□□□□□ -1.79
CCDC178Q5BJE1 AC016925.2-201ENST00000605108 242 ntBASIC3.85□□□□□ -1.79
CCDC178Q5BJE1 AC019193.3-201ENST00000609144 554 ntBASIC3.85□□□□□ -1.79
CCDC178Q5BJE1 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.85□□□□□ -1.79
CCDC178Q5BJE1 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC178Q5BJE1 AC007496.3-201ENST00000624987 3443 ntBASIC3.85□□□□□ -1.79
CCDC178Q5BJE1 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC178Q5BJE1 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.85□□□□□ -1.79
CCDC178Q5BJE1 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
CCDC178Q5BJE1 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.85□□□□□ -1.79
CCDC178Q5BJE1 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CCDC178Q5BJE1 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CCDC178Q5BJE1 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.84□□□□□ -1.79
CCDC178Q5BJE1 AL049641.1-201ENST00000441055 1948 ntBASIC3.84□□□□□ -1.79
CCDC178Q5BJE1 MIR30E-201ENST00000362104 92 ntBASIC3.84□□□□□ -1.79
CCDC178Q5BJE1 RNA5SP295-201ENST00000362655 121 ntBASIC3.84□□□□□ -1.79
CCDC178Q5BJE1 Y_RNA.151-201ENST00000363566 112 ntBASIC3.84□□□□□ -1.79
CCDC178Q5BJE1 Y_RNA.202-201ENST00000364083 110 ntBASIC3.84□□□□□ -1.79
CCDC178Q5BJE1 RNU6-593P-201ENST00000364716 112 ntBASIC3.84□□□□□ -1.79
CCDC178Q5BJE1 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CCDC178Q5BJE1 RNU2-3P-201ENST00000410144 191 ntBASIC3.84□□□□□ -1.79
CCDC178Q5BJE1 RNU2-33P-201ENST00000410344 192 ntBASIC3.84□□□□□ -1.79
CCDC178Q5BJE1 AC007560.1-201ENST00000426912 237 ntBASIC3.84□□□□□ -1.79
CCDC178Q5BJE1 CST9LP2-201ENST00000437612 320 ntBASIC3.84□□□□□ -1.79
CCDC178Q5BJE1 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC178Q5BJE1 AC009237.8-201ENST00000445492 379 ntBASIC3.84□□□□□ -1.79
CCDC178Q5BJE1 FABP5P15-201ENST00000453566 214 ntBASIC3.84□□□□□ -1.79
CCDC178Q5BJE1 AL583843.1-201ENST00000456070 346 ntBASIC3.84□□□□□ -1.79
CCDC178Q5BJE1 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC178Q5BJE1 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.84□□□□□ -1.79
CCDC178Q5BJE1 AC025755.1-201ENST00000521306 278 ntBASIC3.84□□□□□ -1.79
CCDC178Q5BJE1 AC123912.5-201ENST00000605470 343 ntBASIC3.84□□□□□ -1.79
CCDC178Q5BJE1 AP000654.2-201ENST00000605633 586 ntBASIC3.84□□□□□ -1.79
CCDC178Q5BJE1 RMST_8.1-201ENST00000610287 165 ntBASIC3.84□□□□□ -1.79
CCDC178Q5BJE1 AL161423.1-201ENST00000613700 262 ntBASIC3.84□□□□□ -1.79
CCDC178Q5BJE1 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CCDC178Q5BJE1 AC073346.2-201ENST00000624724 2058 ntBASIC3.83□□□□□ -1.8
CCDC178Q5BJE1 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.83□□□□□ -1.8
CCDC178Q5BJE1 Y_RNA.2-201ENST00000362330 96 ntBASIC3.83□□□□□ -1.8
CCDC178Q5BJE1 RNU6-1059P-201ENST00000363752 98 ntBASIC3.83□□□□□ -1.8
CCDC178Q5BJE1 RNU6-1329P-201ENST00000365664 107 ntBASIC3.83□□□□□ -1.8
CCDC178Q5BJE1 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC178Q5BJE1 Y_RNA.404-201ENST00000383978 102 ntBASIC3.83□□□□□ -1.8
CCDC178Q5BJE1 RNU6-890P-201ENST00000384121 107 ntBASIC3.83□□□□□ -1.8
CCDC178Q5BJE1 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
CCDC178Q5BJE1 RNU6-293P-201ENST00000411259 106 ntBASIC3.83□□□□□ -1.8
CCDC178Q5BJE1 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC178Q5BJE1 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.83□□□□□ -1.8
CCDC178Q5BJE1 USP9YP30-201ENST00000430729 455 ntBASIC3.83□□□□□ -1.8
CCDC178Q5BJE1 RPL23AP50-201ENST00000434149 455 ntBASIC3.83□□□□□ -1.8
CCDC178Q5BJE1 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC178Q5BJE1 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC178Q5BJE1 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC178Q5BJE1 AL031274.1-201ENST00000450334 232 ntBASIC3.83□□□□□ -1.8
CCDC178Q5BJE1 ELOCP24-201ENST00000456370 334 ntBASIC3.83□□□□□ -1.8
CCDC178Q5BJE1 AC109925.1-201ENST00000478069 331 ntBASIC3.83□□□□□ -1.8
CCDC178Q5BJE1 AC026782.1-201ENST00000512952 449 ntBASIC3.83□□□□□ -1.8
CCDC178Q5BJE1 Y_RNA.711-201ENST00000516993 102 ntBASIC3.83□□□□□ -1.8
CCDC178Q5BJE1 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.83□□□□□ -1.8
CCDC178Q5BJE1 SNRPGP18-201ENST00000553000 214 ntBASIC3.83□□□□□ -1.8
CCDC178Q5BJE1 MIR5680-201ENST00000577577 84 ntBASIC3.83□□□□□ -1.8
CCDC178Q5BJE1 AC018462.2-201ENST00000605375 395 ntBASIC3.83□□□□□ -1.8
CCDC178Q5BJE1 AC096577.2-201ENST00000611455 153 ntBASIC3.83□□□□□ -1.8
CCDC178Q5BJE1 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC178Q5BJE1 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC178Q5BJE1 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC178Q5BJE1 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC178Q5BJE1 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms