Protein–RNA interactions for Protein: Q53F19

NCBP3, Nuclear cap-binding protein subunit 3, humanhuman

Known RBP Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3Q53F19 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC7.5□□□□□ -1.21
NCBP3Q53F19 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC7.5□□□□□ -1.21
NCBP3Q53F19 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
NCBP3Q53F19 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC7.49□□□□□ -1.21
NCBP3Q53F19 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
NCBP3Q53F19 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
NCBP3Q53F19 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
NCBP3Q53F19 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC7.49□□□□□ -1.21
NCBP3Q53F19 SNURFL-201ENST00000309296 343 ntBASIC7.49□□□□□ -1.21
NCBP3Q53F19 MIR302B-201ENST00000362188 73 ntBASIC7.49□□□□□ -1.21
NCBP3Q53F19 RNU6-414P-201ENST00000363705 104 ntBASIC7.49□□□□□ -1.21
NCBP3Q53F19 SNORA1-201ENST00000384107 130 ntBASIC7.49□□□□□ -1.21
NCBP3Q53F19 MIR607-201ENST00000385241 96 ntBASIC7.49□□□□□ -1.21
NCBP3Q53F19 SNORA12-201ENST00000391162 147 ntBASIC7.49□□□□□ -1.21
NCBP3Q53F19 Z98745.1-201ENST00000402553 494 ntBASIC7.49□□□□□ -1.21
NCBP3Q53F19 AC108075.1-201ENST00000424692 529 ntBASIC7.49□□□□□ -1.21
NCBP3Q53F19 AC010598.1-201ENST00000510378 103 ntBASIC7.49□□□□□ -1.21
NCBP3Q53F19 RNU6-904P-201ENST00000516206 101 ntBASIC7.49□□□□□ -1.21
NCBP3Q53F19 RNU6-126P-201ENST00000516685 103 ntBASIC7.49□□□□□ -1.21
NCBP3Q53F19 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC7.49□□□□□ -1.21
NCBP3Q53F19 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC7.49□□□□□ -1.21
NCBP3Q53F19 MIR4662B-201ENST00000579498 81 ntBASIC7.49□□□□□ -1.21
NCBP3Q53F19 AC107294.3-201ENST00000609211 526 ntBASIC7.49□□□□□ -1.21
NCBP3Q53F19 AC069200.1-201ENST00000609511 323 ntBASIC7.49□□□□□ -1.21
NCBP3Q53F19 AC090607.5-201ENST00000615692 224 ntBASIC7.49□□□□□ -1.21
NCBP3Q53F19 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC7.49□□□□□ -1.21
NCBP3Q53F19 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
NCBP3Q53F19 AL133412.1-201ENST00000380194 2992 ntBASIC7.49□□□□□ -1.21
NCBP3Q53F19 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC7.49□□□□□ -1.21
NCBP3Q53F19 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
NCBP3Q53F19 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
NCBP3Q53F19 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC7.48□□□□□ -1.21
NCBP3Q53F19 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
NCBP3Q53F19 Y_RNA.66-201ENST00000362862 102 ntBASIC7.48□□□□□ -1.21
NCBP3Q53F19 Y_RNA.198-201ENST00000364013 98 ntBASIC7.48□□□□□ -1.21
NCBP3Q53F19 SNORD14D-201ENST00000384390 87 ntBASIC7.48□□□□□ -1.21
NCBP3Q53F19 MIR3065-201ENST00000390137 79 ntBASIC7.48□□□□□ -1.21
NCBP3Q53F19 AC009804.1-201ENST00000400949 179 ntBASIC7.48□□□□□ -1.21
NCBP3Q53F19 RN7SKP17-201ENST00000411242 351 ntBASIC7.48□□□□□ -1.21
NCBP3Q53F19 ACA64.1-201ENST00000459171 127 ntBASIC7.48□□□□□ -1.21
NCBP3Q53F19 RPS23P6-201ENST00000466136 431 ntBASIC7.48□□□□□ -1.21
NCBP3Q53F19 RN7SL629P-201ENST00000489622 285 ntBASIC7.48□□□□□ -1.21
NCBP3Q53F19 OR9P1P-201ENST00000496431 281 ntBASIC7.48□□□□□ -1.21
NCBP3Q53F19 AC136777.2-201ENST00000522979 358 ntBASIC7.48□□□□□ -1.21
NCBP3Q53F19 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC7.48□□□□□ -1.21
NCBP3Q53F19 MIR4311-201ENST00000580794 100 ntBASIC7.48□□□□□ -1.21
NCBP3Q53F19 AC008521.2-201ENST00000591021 259 ntBASIC7.48□□□□□ -1.21
NCBP3Q53F19 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC7.48□□□□□ -1.21
NCBP3Q53F19 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
NCBP3Q53F19 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
NCBP3Q53F19 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
NCBP3Q53F19 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
NCBP3Q53F19 Y_RNA.17-201ENST00000362433 111 ntBASIC7.47□□□□□ -1.21
NCBP3Q53F19 RNU6-1010P-201ENST00000362757 107 ntBASIC7.47□□□□□ -1.21
NCBP3Q53F19 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC7.47□□□□□ -1.21
NCBP3Q53F19 IGHVIII-67-2-201ENST00000519849 88 ntBASIC7.47□□□□□ -1.21
NCBP3Q53F19 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC7.47□□□□□ -1.21
NCBP3Q53F19 IL33-203ENST00000456383 2501 ntTSL 5 BASIC7.47□□□□□ -1.21
NCBP3Q53F19 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC7.47□□□□□ -1.21
NCBP3Q53F19 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
NCBP3Q53F19 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC7.47□□□□□ -1.21
NCBP3Q53F19 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC7.46□□□□□ -1.21
NCBP3Q53F19 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC7.46□□□□□ -1.21
NCBP3Q53F19 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
NCBP3Q53F19 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC7.46□□□□□ -1.22
NCBP3Q53F19 Y_RNA.93-201ENST00000363066 109 ntBASIC7.46□□□□□ -1.22
NCBP3Q53F19 AC096725.1-201ENST00000514266 313 ntBASIC7.46□□□□□ -1.22
NCBP3Q53F19 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC7.46□□□□□ -1.22
NCBP3Q53F19 AC079776.5-201ENST00000641920 211 ntBASIC7.46□□□□□ -1.22
NCBP3Q53F19 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC7.46□□□□□ -1.22
NCBP3Q53F19 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC7.46□□□□□ -1.22
NCBP3Q53F19 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC7.46□□□□□ -1.22
NCBP3Q53F19 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC7.46□□□□□ -1.22
NCBP3Q53F19 AC000123.3-201ENST00000624029 4975 ntBASIC7.46□□□□□ -1.22
NCBP3Q53F19 AP004607.3-201ENST00000530354 3915 ntBASIC7.46□□□□□ -1.22
NCBP3Q53F19 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC7.45□□□□□ -1.22
NCBP3Q53F19 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
NCBP3Q53F19 RNA5SP510-201ENST00000364697 99 ntBASIC7.45□□□□□ -1.22
NCBP3Q53F19 RNU6-1138P-201ENST00000365359 106 ntBASIC7.45□□□□□ -1.22
NCBP3Q53F19 AL117342.1-201ENST00000404861 406 ntBASIC7.45□□□□□ -1.22
NCBP3Q53F19 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC7.45□□□□□ -1.22
NCBP3Q53F19 RNU7-57P-201ENST00000459540 60 ntBASIC7.45□□□□□ -1.22
NCBP3Q53F19 AC022137.1-201ENST00000483735 151 ntBASIC7.45□□□□□ -1.22
NCBP3Q53F19 IGLV3-24-201ENST00000517477 197 ntBASIC7.45□□□□□ -1.22
NCBP3Q53F19 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC7.45□□□□□ -1.22
NCBP3Q53F19 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC7.45□□□□□ -1.22
NCBP3Q53F19 AC022404.1-201ENST00000555320 273 ntBASIC7.45□□□□□ -1.22
NCBP3Q53F19 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC7.45□□□□□ -1.22
NCBP3Q53F19 LINC00901.1-201ENST00000617252 152 ntBASIC7.45□□□□□ -1.22
NCBP3Q53F19 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC7.45□□□□□ -1.22
NCBP3Q53F19 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
NCBP3Q53F19 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
NCBP3Q53F19 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
NCBP3Q53F19 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
NCBP3Q53F19 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
NCBP3Q53F19 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC7.45□□□□□ -1.22
NCBP3Q53F19 AC104260.2-201ENST00000623551 3497 ntBASIC7.44□□□□□ -1.22
NCBP3Q53F19 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
NCBP3Q53F19 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC7.44□□□□□ -1.22
NCBP3Q53F19 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms