Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 AC068647.1-201ENST00000489539 2265 ntBASIC3.73□□□□□ -1.81
ATP13A4Q4VNC1 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
ATP13A4Q4VNC1 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.73□□□□□ -1.81
ATP13A4Q4VNC1 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
ATP13A4Q4VNC1 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.72□□□□□ -1.81
ATP13A4Q4VNC1 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.72□□□□□ -1.81
ATP13A4Q4VNC1 CEP170P1-201ENST00000502249 4587 ntBASIC3.72□□□□□ -1.81
ATP13A4Q4VNC1 Y_RNA.2-201ENST00000362330 96 ntBASIC3.72□□□□□ -1.81
ATP13A4Q4VNC1 Y_RNA.128-201ENST00000363391 112 ntBASIC3.72□□□□□ -1.81
ATP13A4Q4VNC1 RNU1-100P-201ENST00000365255 165 ntBASIC3.72□□□□□ -1.81
ATP13A4Q4VNC1 RNU6-842P-201ENST00000384269 107 ntBASIC3.72□□□□□ -1.81
ATP13A4Q4VNC1 AL513475.1-201ENST00000406602 315 ntBASIC3.72□□□□□ -1.81
ATP13A4Q4VNC1 SNORA57.3-201ENST00000411095 141 ntBASIC3.72□□□□□ -1.81
ATP13A4Q4VNC1 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.72□□□□□ -1.81
ATP13A4Q4VNC1 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.72□□□□□ -1.81
ATP13A4Q4VNC1 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.72□□□□□ -1.81
ATP13A4Q4VNC1 USMG5P1-201ENST00000425964 177 ntBASIC3.72□□□□□ -1.81
ATP13A4Q4VNC1 AC005300.1-201ENST00000428401 373 ntBASIC3.72□□□□□ -1.81
ATP13A4Q4VNC1 AC006946.1-201ENST00000429106 328 ntBASIC3.72□□□□□ -1.81
ATP13A4Q4VNC1 AC008571.1-201ENST00000467232 300 ntBASIC3.72□□□□□ -1.81
ATP13A4Q4VNC1 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
ATP13A4Q4VNC1 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.72□□□□□ -1.81
ATP13A4Q4VNC1 SRGNP1-201ENST00000603392 451 ntBASIC3.72□□□□□ -1.81
ATP13A4Q4VNC1 AC018889.1-201ENST00000605372 397 ntBASIC3.72□□□□□ -1.81
ATP13A4Q4VNC1 AC005046.1-201ENST00000608515 625 ntBASIC3.72□□□□□ -1.81
ATP13A4Q4VNC1 AC011890.2-201ENST00000613393 294 ntBASIC3.72□□□□□ -1.81
ATP13A4Q4VNC1 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
ATP13A4Q4VNC1 HSPA8P1-201ENST00000425843 1833 ntBASIC3.72□□□□□ -1.81
ATP13A4Q4VNC1 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
ATP13A4Q4VNC1 AC010680.1-201ENST00000590024 3590 ntBASIC3.71□□□□□ -1.82
ATP13A4Q4VNC1 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
ATP13A4Q4VNC1 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
ATP13A4Q4VNC1 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
ATP13A4Q4VNC1 SNORD9-201ENST00000362566 104 ntBASIC3.71□□□□□ -1.82
ATP13A4Q4VNC1 Y_RNA.197-201ENST00000364004 102 ntBASIC3.71□□□□□ -1.82
ATP13A4Q4VNC1 RNU6-596P-201ENST00000365395 98 ntBASIC3.71□□□□□ -1.82
ATP13A4Q4VNC1 RNU6-890P-201ENST00000384121 107 ntBASIC3.71□□□□□ -1.82
ATP13A4Q4VNC1 RNA5SP252-201ENST00000391131 119 ntBASIC3.71□□□□□ -1.82
ATP13A4Q4VNC1 RPS29P13-201ENST00000402041 169 ntBASIC3.71□□□□□ -1.82
ATP13A4Q4VNC1 U3.39-201ENST00000408569 239 ntBASIC3.71□□□□□ -1.82
ATP13A4Q4VNC1 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.71□□□□□ -1.82
ATP13A4Q4VNC1 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.71□□□□□ -1.82
ATP13A4Q4VNC1 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.71□□□□□ -1.82
ATP13A4Q4VNC1 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.71□□□□□ -1.82
ATP13A4Q4VNC1 RNU7-23P-201ENST00000459465 62 ntBASIC3.71□□□□□ -1.82
ATP13A4Q4VNC1 RN7SL542P-201ENST00000467147 294 ntBASIC3.71□□□□□ -1.82
ATP13A4Q4VNC1 AC034236.1-201ENST00000469891 373 ntBASIC3.71□□□□□ -1.82
ATP13A4Q4VNC1 AL049830.2-201ENST00000480072 201 ntBASIC3.71□□□□□ -1.82
ATP13A4Q4VNC1 ACA59.1-201ENST00000515966 143 ntBASIC3.71□□□□□ -1.82
ATP13A4Q4VNC1 RNU6-579P-201ENST00000516879 102 ntBASIC3.71□□□□□ -1.82
ATP13A4Q4VNC1 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.71□□□□□ -1.82
ATP13A4Q4VNC1 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.71□□□□□ -1.82
ATP13A4Q4VNC1 AC010186.2-204ENST00000537668 439 ntBASIC3.71□□□□□ -1.82
ATP13A4Q4VNC1 AC026333.2-201ENST00000542164 106 ntBASIC3.71□□□□□ -1.82
ATP13A4Q4VNC1 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.71□□□□□ -1.82
ATP13A4Q4VNC1 AC109446.1-201ENST00000566172 220 ntBASIC3.71□□□□□ -1.82
ATP13A4Q4VNC1 MIR1254-2-201ENST00000579553 63 ntBASIC3.71□□□□□ -1.82
ATP13A4Q4VNC1 MIR3976-201ENST00000606807 139 ntBASIC3.71□□□□□ -1.82
ATP13A4Q4VNC1 AL121772.2-201ENST00000614331 297 ntBASIC3.71□□□□□ -1.82
ATP13A4Q4VNC1 U4.6-201ENST00000621618 127 ntBASIC3.71□□□□□ -1.82
ATP13A4Q4VNC1 AC092608.2-201ENST00000624427 218 ntBASIC3.71□□□□□ -1.82
ATP13A4Q4VNC1 MIR3199-2-201ENST00000636243 86 ntBASIC3.71□□□□□ -1.82
ATP13A4Q4VNC1 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
ATP13A4Q4VNC1 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
ATP13A4Q4VNC1 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
ATP13A4Q4VNC1 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.7□□□□□ -1.82
ATP13A4Q4VNC1 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.7□□□□□ -1.82
ATP13A4Q4VNC1 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.7□□□□□ -1.82
ATP13A4Q4VNC1 SNORA14A-201ENST00000364773 135 ntBASIC3.7□□□□□ -1.82
ATP13A4Q4VNC1 RNU6-336P-201ENST00000364891 107 ntBASIC3.7□□□□□ -1.82
ATP13A4Q4VNC1 RNU6-1280P-201ENST00000365211 107 ntBASIC3.7□□□□□ -1.82
ATP13A4Q4VNC1 Y_RNA.395-201ENST00000383945 109 ntBASIC3.7□□□□□ -1.82
ATP13A4Q4VNC1 RNU6-474P-201ENST00000384243 107 ntBASIC3.7□□□□□ -1.82
ATP13A4Q4VNC1 MIR554-201ENST00000384874 96 ntBASIC3.7□□□□□ -1.82
ATP13A4Q4VNC1 SNORA75.6-201ENST00000391318 127 ntBASIC3.7□□□□□ -1.82
ATP13A4Q4VNC1 MIR548P-201ENST00000408336 84 ntBASIC3.7□□□□□ -1.82
ATP13A4Q4VNC1 AL035423.1-201ENST00000420331 213 ntBASIC3.7□□□□□ -1.82
ATP13A4Q4VNC1 Z82205.1-201ENST00000428456 297 ntBASIC3.7□□□□□ -1.82
ATP13A4Q4VNC1 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.7□□□□□ -1.82
ATP13A4Q4VNC1 AL445584.1-201ENST00000431451 330 ntBASIC3.7□□□□□ -1.82
ATP13A4Q4VNC1 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.7□□□□□ -1.82
ATP13A4Q4VNC1 Y_RNA.631-201ENST00000459607 101 ntBASIC3.7□□□□□ -1.82
ATP13A4Q4VNC1 AP002884.2-201ENST00000471647 395 ntBASIC3.7□□□□□ -1.82
ATP13A4Q4VNC1 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.7□□□□□ -1.82
ATP13A4Q4VNC1 RPL21P129-201ENST00000491732 478 ntBASIC3.7□□□□□ -1.82
ATP13A4Q4VNC1 AC114801.2-201ENST00000503825 781 ntBASIC3.7□□□□□ -1.82
ATP13A4Q4VNC1 AP003072.1-201ENST00000531740 145 ntBASIC3.7□□□□□ -1.82
ATP13A4Q4VNC1 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.7□□□□□ -1.82
ATP13A4Q4VNC1 AC006199.1-201ENST00000548728 219 ntBASIC3.7□□□□□ -1.82
ATP13A4Q4VNC1 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.7□□□□□ -1.82
ATP13A4Q4VNC1 AC020661.2-201ENST00000560114 134 ntBASIC3.7□□□□□ -1.82
ATP13A4Q4VNC1 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.7□□□□□ -1.82
ATP13A4Q4VNC1 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.7□□□□□ -1.82
ATP13A4Q4VNC1 AC022149.2-201ENST00000621061 203 ntBASIC3.7□□□□□ -1.82
ATP13A4Q4VNC1 AC090617.7-201ENST00000623952 126 ntBASIC3.7□□□□□ -1.82
ATP13A4Q4VNC1 AC103988.1-201ENST00000566382 2177 ntBASIC3.7□□□□□ -1.82
ATP13A4Q4VNC1 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
ATP13A4Q4VNC1 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
ATP13A4Q4VNC1 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
ATP13A4Q4VNC1 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 136.8 ms