Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC144BQ3MJ40 RNU6-858P-201ENST00000362436 107 ntBASIC4.09□□□□□ -1.75
CCDC144BQ3MJ40 RNU6-827P-201ENST00000365553 106 ntBASIC4.09□□□□□ -1.75
CCDC144BQ3MJ40 RNU6-1027P-201ENST00000383998 107 ntBASIC4.09□□□□□ -1.75
CCDC144BQ3MJ40 RNU6-95P-201ENST00000384697 107 ntBASIC4.09□□□□□ -1.75
CCDC144BQ3MJ40 RNU6-19P-201ENST00000384718 107 ntBASIC4.09□□□□□ -1.75
CCDC144BQ3MJ40 MIR548F5-201ENST00000408421 86 ntBASIC4.09□□□□□ -1.75
CCDC144BQ3MJ40 RN7SKP158-201ENST00000410453 326 ntBASIC4.09□□□□□ -1.75
CCDC144BQ3MJ40 RNU2-49P-201ENST00000410666 184 ntBASIC4.09□□□□□ -1.75
CCDC144BQ3MJ40 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC144BQ3MJ40 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.09□□□□□ -1.75
CCDC144BQ3MJ40 RPL21P40-201ENST00000428586 483 ntBASIC4.09□□□□□ -1.75
CCDC144BQ3MJ40 MTND3P23-201ENST00000431980 347 ntBASIC4.09□□□□□ -1.75
CCDC144BQ3MJ40 AL591043.1-201ENST00000432461 424 ntBASIC4.09□□□□□ -1.75
CCDC144BQ3MJ40 MRPL42P6-201ENST00000486397 371 ntBASIC4.09□□□□□ -1.75
CCDC144BQ3MJ40 AK3P2-201ENST00000507976 429 ntBASIC4.09□□□□□ -1.75
CCDC144BQ3MJ40 MTCYBP40-201ENST00000509390 1135 ntBASIC4.09□□□□□ -1.75
CCDC144BQ3MJ40 SMURF2P1-201ENST00000514992 481 ntBASIC4.09□□□□□ -1.75
CCDC144BQ3MJ40 RN7SKP24-201ENST00000515888 284 ntBASIC4.09□□□□□ -1.75
CCDC144BQ3MJ40 RNU1-54P-201ENST00000517181 120 ntBASIC4.09□□□□□ -1.75
CCDC144BQ3MJ40 AP006245.1-201ENST00000522549 120 ntBASIC4.09□□□□□ -1.75
CCDC144BQ3MJ40 AP000889.1-201ENST00000530968 660 ntBASIC4.09□□□□□ -1.75
CCDC144BQ3MJ40 AC009163.5-201ENST00000575421 637 ntBASIC4.09□□□□□ -1.75
CCDC144BQ3MJ40 C8orf59P2-201ENST00000603441 271 ntBASIC4.09□□□□□ -1.75
CCDC144BQ3MJ40 AC005000.2-201ENST00000605468 310 ntBASIC4.09□□□□□ -1.75
CCDC144BQ3MJ40 AC064836.2-201ENST00000609491 462 ntBASIC4.09□□□□□ -1.75
CCDC144BQ3MJ40 5S_rRNA.12-201ENST00000617631 107 ntBASIC4.09□□□□□ -1.75
CCDC144BQ3MJ40 AC244517.12-201ENST00000623581 663 ntBASIC4.09□□□□□ -1.75
CCDC144BQ3MJ40 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC144BQ3MJ40 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC144BQ3MJ40 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC144BQ3MJ40 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC144BQ3MJ40 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
CCDC144BQ3MJ40 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CCDC144BQ3MJ40 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CCDC144BQ3MJ40 HAUS6P2-201ENST00000433254 2404 ntBASIC4.09□□□□□ -1.76
CCDC144BQ3MJ40 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CCDC144BQ3MJ40 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC144BQ3MJ40 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC144BQ3MJ40 SNORD62.1-201ENST00000362541 86 ntBASIC4.08□□□□□ -1.76
CCDC144BQ3MJ40 RNU6-527P-201ENST00000363425 104 ntBASIC4.08□□□□□ -1.76
CCDC144BQ3MJ40 NDUFB4P4-201ENST00000404822 243 ntBASIC4.08□□□□□ -1.76
CCDC144BQ3MJ40 FTH1P15-201ENST00000406984 280 ntBASIC4.08□□□□□ -1.76
CCDC144BQ3MJ40 RNA5SP120-201ENST00000410900 112 ntBASIC4.08□□□□□ -1.76
CCDC144BQ3MJ40 DBIP2-201ENST00000419076 262 ntBASIC4.08□□□□□ -1.76
CCDC144BQ3MJ40 PTGES3P4-201ENST00000426243 356 ntBASIC4.08□□□□□ -1.76
CCDC144BQ3MJ40 FABP5P14-201ENST00000437273 393 ntBASIC4.08□□□□□ -1.76
CCDC144BQ3MJ40 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC144BQ3MJ40 RNU5F-8P-201ENST00000515941 111 ntBASIC4.08□□□□□ -1.76
CCDC144BQ3MJ40 ACA59.2-201ENST00000517061 156 ntBASIC4.08□□□□□ -1.76
CCDC144BQ3MJ40 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC144BQ3MJ40 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC144BQ3MJ40 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.08□□□□□ -1.76
CCDC144BQ3MJ40 AC010653.1-201ENST00000571108 881 ntBASIC4.08□□□□□ -1.76
CCDC144BQ3MJ40 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC144BQ3MJ40 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC144BQ3MJ40 MIR7851-201ENST00000610611 160 ntBASIC4.08□□□□□ -1.76
CCDC144BQ3MJ40 AL591516.1-201ENST00000611326 274 ntBASIC4.08□□□□□ -1.76
CCDC144BQ3MJ40 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC144BQ3MJ40 MIR1302-1-201ENST00000637932 143 ntBASIC4.08□□□□□ -1.76
CCDC144BQ3MJ40 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC144BQ3MJ40 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC144BQ3MJ40 AC110774.1-201ENST00000623567 2018 ntBASIC4.07□□□□□ -1.76
CCDC144BQ3MJ40 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC144BQ3MJ40 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC144BQ3MJ40 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
CCDC144BQ3MJ40 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC144BQ3MJ40 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.07□□□□□ -1.76
CCDC144BQ3MJ40 ZBTB8OSP1-201ENST00000342688 498 ntBASIC4.07□□□□□ -1.76
CCDC144BQ3MJ40 MIR30E-201ENST00000362104 92 ntBASIC4.07□□□□□ -1.76
CCDC144BQ3MJ40 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC144BQ3MJ40 Y_RNA.387-201ENST00000383918 102 ntBASIC4.07□□□□□ -1.76
CCDC144BQ3MJ40 RNU6-933P-201ENST00000384424 107 ntBASIC4.07□□□□□ -1.76
CCDC144BQ3MJ40 RNU6-748P-201ENST00000384648 107 ntBASIC4.07□□□□□ -1.76
CCDC144BQ3MJ40 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC144BQ3MJ40 ATG3P1-201ENST00000419507 911 ntBASIC4.07□□□□□ -1.76
CCDC144BQ3MJ40 RPS3AP52-201ENST00000435639 297 ntBASIC4.07□□□□□ -1.76
CCDC144BQ3MJ40 U8.21-201ENST00000459536 136 ntBASIC4.07□□□□□ -1.76
CCDC144BQ3MJ40 AC107626.1-201ENST00000471084 183 ntBASIC4.07□□□□□ -1.76
CCDC144BQ3MJ40 AC025518.1-201ENST00000479856 347 ntBASIC4.07□□□□□ -1.76
CCDC144BQ3MJ40 AC114801.2-201ENST00000503825 781 ntBASIC4.07□□□□□ -1.76
CCDC144BQ3MJ40 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC144BQ3MJ40 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.07□□□□□ -1.76
CCDC144BQ3MJ40 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC144BQ3MJ40 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC144BQ3MJ40 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC144BQ3MJ40 AL355877.2-201ENST00000603670 358 ntBASIC4.07□□□□□ -1.76
CCDC144BQ3MJ40 AC091152.3-201ENST00000604227 325 ntBASIC4.07□□□□□ -1.76
CCDC144BQ3MJ40 AL670379.10-201ENST00000604330 253 ntBASIC4.07□□□□□ -1.76
CCDC144BQ3MJ40 AL670379.9-201ENST00000605428 253 ntBASIC4.07□□□□□ -1.76
CCDC144BQ3MJ40 AL121917.1-203ENST00000605534 577 ntBASIC4.07□□□□□ -1.76
CCDC144BQ3MJ40 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC144BQ3MJ40 AL359697.1-201ENST00000624879 587 ntBASIC4.07□□□□□ -1.76
CCDC144BQ3MJ40 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CCDC144BQ3MJ40 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC144BQ3MJ40 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
CCDC144BQ3MJ40 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
CCDC144BQ3MJ40 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
CCDC144BQ3MJ40 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
CCDC144BQ3MJ40 RNU4-35P-201ENST00000362588 141 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms