Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC005668.1-201ENST00000571142 476 ntBASIC1.01□□□□□ -2.25
RFX7Q2KHR2 BNIP3P23-201ENST00000599655 511 ntBASIC1.01□□□□□ -2.25
RFX7Q2KHR2 AL355598.1-201ENST00000604169 202 ntBASIC1.01□□□□□ -2.25
RFX7Q2KHR2 AL390208.1-201ENST00000605885 644 ntBASIC1.01□□□□□ -2.25
RFX7Q2KHR2 AL355472.4-201ENST00000610233 626 ntBASIC1.01□□□□□ -2.25
RFX7Q2KHR2 AC107075.1-201ENST00000613695 314 ntBASIC1.01□□□□□ -2.25
RFX7Q2KHR2 AL118556.2-201ENST00000614375 824 ntBASIC1.01□□□□□ -2.25
RFX7Q2KHR2 MIR8074-201ENST00000615081 81 ntBASIC1.01□□□□□ -2.25
RFX7Q2KHR2 AL109620.1-201ENST00000618738 1197 ntBASIC1.01□□□□□ -2.25
RFX7Q2KHR2 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.01□□□□□ -2.25
RFX7Q2KHR2 U2.21-201ENST00000637295 81 ntBASIC1.01□□□□□ -2.25
RFX7Q2KHR2 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.01□□□□□ -2.25
RFX7Q2KHR2 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC1□□□□□ -2.25
RFX7Q2KHR2 AL442644.1-201ENST00000454390 3105 ntBASIC1□□□□□ -2.25
RFX7Q2KHR2 U6.112-201ENST00000384129 70 ntBASIC1□□□□□ -2.25
RFX7Q2KHR2 RNU6-17P-201ENST00000384245 107 ntBASIC1□□□□□ -2.25
RFX7Q2KHR2 RNU6-18P-201ENST00000384527 107 ntBASIC1□□□□□ -2.25
RFX7Q2KHR2 RN7SKP61-201ENST00000410642 295 ntBASIC1□□□□□ -2.25
RFX7Q2KHR2 RNU4-27P-201ENST00000410889 139 ntBASIC1□□□□□ -2.25
RFX7Q2KHR2 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1□□□□□ -2.25
RFX7Q2KHR2 AL158050.1-201ENST00000416077 457 ntBASIC1□□□□□ -2.25
RFX7Q2KHR2 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC1□□□□□ -2.25
RFX7Q2KHR2 AC244505.3-201ENST00000454598 187 ntBASIC1□□□□□ -2.25
RFX7Q2KHR2 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1□□□□□ -2.25
RFX7Q2KHR2 AC010468.3-201ENST00000508225 458 ntBASIC1□□□□□ -2.25
RFX7Q2KHR2 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC1□□□□□ -2.25
RFX7Q2KHR2 RNU6-1261P-201ENST00000517194 104 ntBASIC1□□□□□ -2.25
RFX7Q2KHR2 AC006518.2-201ENST00000542513 940 ntBASIC1□□□□□ -2.25
RFX7Q2KHR2 RAB11AP2-201ENST00000545905 639 ntBASIC1□□□□□ -2.25
RFX7Q2KHR2 AC125611.1-201ENST00000549563 229 ntBASIC1□□□□□ -2.25
RFX7Q2KHR2 MRPS36P5-201ENST00000551909 298 ntBASIC1□□□□□ -2.25
RFX7Q2KHR2 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1□□□□□ -2.25
RFX7Q2KHR2 MIR4666A-201ENST00000580160 79 ntBASIC1□□□□□ -2.25
RFX7Q2KHR2 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1□□□□□ -2.25
RFX7Q2KHR2 AL139344.1-201ENST00000605228 195 ntBASIC1□□□□□ -2.25
RFX7Q2KHR2 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1□□□□□ -2.25
RFX7Q2KHR2 MIR1322-201ENST00000638013 71 ntBASIC1□□□□□ -2.25
RFX7Q2KHR2 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
RFX7Q2KHR2 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
RFX7Q2KHR2 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.99□□□□□ -2.25
RFX7Q2KHR2 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.99□□□□□ -2.25
RFX7Q2KHR2 KATNBL1P6-201ENST00000453433 915 ntBASIC0.99□□□□□ -2.25
RFX7Q2KHR2 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC0.99□□□□□ -2.25
RFX7Q2KHR2 snoU13.9-201ENST00000458927 103 ntBASIC0.99□□□□□ -2.25
RFX7Q2KHR2 RPL37P6-201ENST00000460682 294 ntBASIC0.99□□□□□ -2.25
RFX7Q2KHR2 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.99□□□□□ -2.25
RFX7Q2KHR2 CYB5AP5-201ENST00000549779 389 ntBASIC0.99□□□□□ -2.25
RFX7Q2KHR2 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC0.99□□□□□ -2.25
RFX7Q2KHR2 AC012213.3-201ENST00000577199 777 ntBASIC0.99□□□□□ -2.25
RFX7Q2KHR2 MIR4789-201ENST00000577469 82 ntBASIC0.99□□□□□ -2.25
RFX7Q2KHR2 AC092953.2-201ENST00000608000 699 ntBASIC0.99□□□□□ -2.25
RFX7Q2KHR2 AF129408.1-201ENST00000608767 431 ntBASIC0.99□□□□□ -2.25
RFX7Q2KHR2 DUSP12P1-201ENST00000612874 516 ntBASIC0.99□□□□□ -2.25
RFX7Q2KHR2 AC017037.3-201ENST00000625016 472 ntBASIC0.99□□□□□ -2.25
RFX7Q2KHR2 AC019226.1-201ENST00000625666 515 ntBASIC0.99□□□□□ -2.25
RFX7Q2KHR2 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC0.99□□□□□ -2.25
RFX7Q2KHR2 RNU6-1187P-201ENST00000364771 110 ntBASIC0.98□□□□□ -2.25
RFX7Q2KHR2 RNU6-658P-201ENST00000384606 106 ntBASIC0.98□□□□□ -2.25
RFX7Q2KHR2 AC007435.1-201ENST00000421086 415 ntBASIC0.98□□□□□ -2.25
RFX7Q2KHR2 AL353706.1-201ENST00000436728 494 ntBASIC0.98□□□□□ -2.25
RFX7Q2KHR2 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.98□□□□□ -2.25
RFX7Q2KHR2 FCF1P6-201ENST00000456841 595 ntBASIC0.98□□□□□ -2.25
RFX7Q2KHR2 AC013267.1-201ENST00000458227 267 ntBASIC0.98□□□□□ -2.25
RFX7Q2KHR2 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.98□□□□□ -2.25
RFX7Q2KHR2 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.98□□□□□ -2.25
RFX7Q2KHR2 RNU6-351P-201ENST00000516097 100 ntBASIC0.98□□□□□ -2.25
RFX7Q2KHR2 AC023632.1-201ENST00000518463 375 ntBASIC0.98□□□□□ -2.25
RFX7Q2KHR2 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.98□□□□□ -2.25
RFX7Q2KHR2 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC0.98□□□□□ -2.25
RFX7Q2KHR2 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.98□□□□□ -2.25
RFX7Q2KHR2 AC138915.2-201ENST00000569776 97 ntBASIC0.98□□□□□ -2.25
RFX7Q2KHR2 ROCK1P1-201ENST00000573767 549 ntBASIC0.98□□□□□ -2.25
RFX7Q2KHR2 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC0.98□□□□□ -2.25
RFX7Q2KHR2 OR4H6P-202ENST00000603819 340 ntBASIC0.98□□□□□ -2.25
RFX7Q2KHR2 AL359314.1-201ENST00000616913 261 ntBASIC0.98□□□□□ -2.25
RFX7Q2KHR2 AC009268.2-201ENST00000621925 457 ntBASIC0.98□□□□□ -2.25
RFX7Q2KHR2 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
RFX7Q2KHR2 SNRPEP3-201ENST00000338402 276 ntBASIC0.97□□□□□ -2.25
RFX7Q2KHR2 SNORD115-3-201ENST00000363100 82 ntBASIC0.97□□□□□ -2.25
RFX7Q2KHR2 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
RFX7Q2KHR2 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC0.97□□□□□ -2.25
RFX7Q2KHR2 RNU2-36P-201ENST00000410361 191 ntBASIC0.97□□□□□ -2.25
RFX7Q2KHR2 AC078974.1-201ENST00000411597 223 ntBASIC0.97□□□□□ -2.25
RFX7Q2KHR2 CBX3P6-201ENST00000430257 527 ntBASIC0.97□□□□□ -2.25
RFX7Q2KHR2 MTND1P28-201ENST00000435623 950 ntBASIC0.97□□□□□ -2.25
RFX7Q2KHR2 USP9YP22-201ENST00000438971 294 ntBASIC0.97□□□□□ -2.25
RFX7Q2KHR2 CR769776.1-201ENST00000441254 787 ntBASIC0.97□□□□□ -2.25
RFX7Q2KHR2 AC245102.2-201ENST00000448956 180 ntBASIC0.97□□□□□ -2.25
RFX7Q2KHR2 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.97□□□□□ -2.25
RFX7Q2KHR2 OFD1P7Y-201ENST00000454643 1155 ntBASIC0.97□□□□□ -2.25
RFX7Q2KHR2 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.97□□□□□ -2.25
RFX7Q2KHR2 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC0.97□□□□□ -2.25
RFX7Q2KHR2 AC018437.1-201ENST00000492214 406 ntBASIC0.97□□□□□ -2.25
RFX7Q2KHR2 AC114981.1-201ENST00000503897 678 ntBASIC0.97□□□□□ -2.25
RFX7Q2KHR2 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.97□□□□□ -2.25
RFX7Q2KHR2 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.97□□□□□ -2.25
RFX7Q2KHR2 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC0.97□□□□□ -2.25
RFX7Q2KHR2 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.97□□□□□ -2.25
RFX7Q2KHR2 AC005832.3-201ENST00000537929 631 ntBASIC0.97□□□□□ -2.25
RFX7Q2KHR2 ZNF971P-201ENST00000562068 1249 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms