Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 RNU2-41P-201ENST00000410991 178 ntBASIC1.08□□□□□ -2.24
H3F3AP84243 SRIP3-201ENST00000413200 219 ntBASIC1.08□□□□□ -2.24
H3F3AP84243 AL022400.1-201ENST00000423946 935 ntBASIC1.08□□□□□ -2.24
H3F3AP84243 RPS6P15-201ENST00000431996 751 ntBASIC1.08□□□□□ -2.24
H3F3AP84243 AC017099.1-201ENST00000448261 1028 ntBASIC1.08□□□□□ -2.24
H3F3AP84243 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.08□□□□□ -2.24
H3F3AP84243 RPL36AP21-201ENST00000490372 323 ntBASIC1.08□□□□□ -2.24
H3F3AP84243 RNVU1-2-201ENST00000516326 135 ntBASIC1.08□□□□□ -2.24
H3F3AP84243 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC1.08□□□□□ -2.24
H3F3AP84243 AP003034.1-201ENST00000534621 422 ntBASIC1.08□□□□□ -2.24
H3F3AP84243 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.08□□□□□ -2.24
H3F3AP84243 RRN3P3-201ENST00000549207 578 ntBASIC1.08□□□□□ -2.24
H3F3AP84243 AL731537.2-201ENST00000561565 951 ntBASIC1.08□□□□□ -2.24
H3F3AP84243 MIR4498-201ENST00000577599 66 ntBASIC1.08□□□□□ -2.24
H3F3AP84243 AC060771.1-201ENST00000582031 164 ntBASIC1.08□□□□□ -2.24
H3F3AP84243 AC012065.4-201ENST00000602445 679 ntBASIC1.08□□□□□ -2.24
H3F3AP84243 AC098614.4-201ENST00000607601 462 ntBASIC1.08□□□□□ -2.24
H3F3AP84243 AL133445.2-201ENST00000611191 527 ntBASIC1.08□□□□□ -2.24
H3F3AP84243 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.08□□□□□ -2.24
H3F3AP84243 AC009269.6-201ENST00000621778 588 ntBASIC1.08□□□□□ -2.24
H3F3AP84243 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.08□□□□□ -2.24
H3F3AP84243 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
H3F3AP84243 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
H3F3AP84243 RNU6-858P-201ENST00000362436 107 ntBASIC1.07□□□□□ -2.24
H3F3AP84243 RNU6-743P-201ENST00000364151 106 ntBASIC1.07□□□□□ -2.24
H3F3AP84243 FTH1P15-201ENST00000406984 280 ntBASIC1.07□□□□□ -2.24
H3F3AP84243 Y_RNA.595-201ENST00000410403 105 ntBASIC1.07□□□□□ -2.24
H3F3AP84243 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.07□□□□□ -2.24
H3F3AP84243 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.07□□□□□ -2.24
H3F3AP84243 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.07□□□□□ -2.24
H3F3AP84243 NCOR1P3-201ENST00000420479 303 ntBASIC1.07□□□□□ -2.24
H3F3AP84243 MRPS36P1-201ENST00000421291 307 ntBASIC1.07□□□□□ -2.24
H3F3AP84243 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.07□□□□□ -2.24
H3F3AP84243 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.07□□□□□ -2.24
H3F3AP84243 AC025465.3-201ENST00000510570 311 ntBASIC1.07□□□□□ -2.24
H3F3AP84243 RNY4P37-201ENST00000516225 96 ntBASIC1.07□□□□□ -2.24
H3F3AP84243 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.07□□□□□ -2.24
H3F3AP84243 AC022616.8-201ENST00000533569 253 ntBASIC1.07□□□□□ -2.24
H3F3AP84243 AC019288.1-201ENST00000557918 224 ntBASIC1.07□□□□□ -2.24
H3F3AP84243 AP001542.1-201ENST00000591314 200 ntBASIC1.07□□□□□ -2.24
H3F3AP84243 VN1R87P-201ENST00000596706 487 ntBASIC1.07□□□□□ -2.24
H3F3AP84243 AC069545.1-201ENST00000605671 358 ntBASIC1.07□□□□□ -2.24
H3F3AP84243 AC090970.3-201ENST00000612566 866 ntBASIC1.07□□□□□ -2.24
H3F3AP84243 AL157834.3-201ENST00000615543 103 ntBASIC1.07□□□□□ -2.24
H3F3AP84243 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.07□□□□□ -2.24
H3F3AP84243 HAUS6P2-201ENST00000433254 2404 ntBASIC1.07□□□□□ -2.24
H3F3AP84243 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.06□□□□□ -2.24
H3F3AP84243 AL391987.6-201ENST00000305671 199 ntBASIC1.06□□□□□ -2.24
H3F3AP84243 RNU6-271P-201ENST00000363858 105 ntBASIC1.06□□□□□ -2.24
H3F3AP84243 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.06□□□□□ -2.24
H3F3AP84243 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC1.06□□□□□ -2.24
H3F3AP84243 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC1.06□□□□□ -2.24
H3F3AP84243 RSL24D1P8-201ENST00000434442 492 ntBASIC1.06□□□□□ -2.24
H3F3AP84243 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.06□□□□□ -2.24
H3F3AP84243 DUXAP8-207ENST00000456786 622 ntBASIC1.06□□□□□ -2.24
H3F3AP84243 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.06□□□□□ -2.24
H3F3AP84243 RNA5SP445-201ENST00000515889 115 ntBASIC1.06□□□□□ -2.24
H3F3AP84243 RNU6-965P-201ENST00000516721 96 ntBASIC1.06□□□□□ -2.24
H3F3AP84243 RNU6-143P-201ENST00000516942 93 ntBASIC1.06□□□□□ -2.24
H3F3AP84243 SNORA31.17-201ENST00000516953 127 ntBASIC1.06□□□□□ -2.24
H3F3AP84243 AC109329.1-201ENST00000518744 317 ntBASIC1.06□□□□□ -2.24
H3F3AP84243 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC1.06□□□□□ -2.24
H3F3AP84243 AC090821.2-201ENST00000523552 176 ntBASIC1.06□□□□□ -2.24
H3F3AP84243 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.06□□□□□ -2.24
H3F3AP84243 RPL21P5-201ENST00000554662 472 ntBASIC1.06□□□□□ -2.24
H3F3AP84243 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.06□□□□□ -2.24
H3F3AP84243 WISP1-OT1-201ENST00000602893 642 ntBASIC1.06□□□□□ -2.24
H3F3AP84243 AC012360.2-201ENST00000609349 391 ntBASIC1.06□□□□□ -2.24
H3F3AP84243 AC092125.1-201ENST00000562568 1995 ntBASIC1.05□□□□□ -2.24
H3F3AP84243 RNU6-939P-201ENST00000384634 107 ntBASIC1.05□□□□□ -2.24
H3F3AP84243 FGF7P8-201ENST00000402994 292 ntBASIC1.05□□□□□ -2.24
H3F3AP84243 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.05□□□□□ -2.24
H3F3AP84243 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.05□□□□□ -2.24
H3F3AP84243 MTND5P25-201ENST00000430499 799 ntBASIC1.05□□□□□ -2.24
H3F3AP84243 TOMM22P2-201ENST00000430735 237 ntBASIC1.05□□□□□ -2.24
H3F3AP84243 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC1.05□□□□□ -2.24
H3F3AP84243 AL135790.2-201ENST00000437701 267 ntBASIC1.05□□□□□ -2.24
H3F3AP84243 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.05□□□□□ -2.24
H3F3AP84243 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.05□□□□□ -2.24
H3F3AP84243 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.05□□□□□ -2.24
H3F3AP84243 AC012308.1-201ENST00000451232 178 ntBASIC1.05□□□□□ -2.24
H3F3AP84243 AC024589.1-201ENST00000512207 263 ntBASIC1.05□□□□□ -2.24
H3F3AP84243 SNORA31.19-201ENST00000517079 126 ntBASIC1.05□□□□□ -2.24
H3F3AP84243 RNU6-902P-201ENST00000517212 91 ntBASIC1.05□□□□□ -2.24
H3F3AP84243 AC009902.1-201ENST00000519351 183 ntBASIC1.05□□□□□ -2.24
H3F3AP84243 AC104417.1-201ENST00000523974 751 ntBASIC1.05□□□□□ -2.24
H3F3AP84243 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.05□□□□□ -2.24
H3F3AP84243 AC104072.1-201ENST00000568817 668 ntBASIC1.05□□□□□ -2.24
H3F3AP84243 VN1R83P-201ENST00000595685 445 ntBASIC1.05□□□□□ -2.24
H3F3AP84243 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.05□□□□□ -2.24
H3F3AP84243 AC004987.4-201ENST00000603383 338 ntBASIC1.05□□□□□ -2.24
H3F3AP84243 AC097468.3-201ENST00000607956 456 ntBASIC1.05□□□□□ -2.24
H3F3AP84243 uc_338.15-201ENST00000615470 191 ntBASIC1.05□□□□□ -2.24
H3F3AP84243 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
H3F3AP84243 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.05□□□□□ -2.24
H3F3AP84243 AC112204.3-201ENST00000623822 332 ntBASIC1.05□□□□□ -2.24
H3F3AP84243 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
H3F3AP84243 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
H3F3AP84243 RNU6-289P-201ENST00000364093 107 ntBASIC1.04□□□□□ -2.24
H3F3AP84243 RNU4-51P-201ENST00000364206 140 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 171.4 ms