Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AL031274.1-201ENST00000450334 232 ntBASIC3.13□□□□□ -1.91
RAE1P78406 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RAE1P78406 AC008155.2-201ENST00000464337 397 ntBASIC3.13□□□□□ -1.91
RAE1P78406 AC113155.1-201ENST00000511141 769 ntBASIC3.13□□□□□ -1.91
RAE1P78406 Y_RNA.708-201ENST00000516950 96 ntBASIC3.13□□□□□ -1.91
RAE1P78406 TRAV32-201ENST00000553993 340 ntBASIC3.13□□□□□ -1.91
RAE1P78406 LINC00933-203ENST00000559812 219 ntBASIC3.13□□□□□ -1.91
RAE1P78406 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.13□□□□□ -1.91
RAE1P78406 AC018462.2-201ENST00000605375 395 ntBASIC3.13□□□□□ -1.91
RAE1P78406 AL121917.1-203ENST00000605534 577 ntBASIC3.13□□□□□ -1.91
RAE1P78406 AL133215.3-201ENST00000609801 448 ntBASIC3.13□□□□□ -1.91
RAE1P78406 AC133104.2-201ENST00000615272 193 ntBASIC3.13□□□□□ -1.91
RAE1P78406 AC068831.7-201ENST00000616954 363 ntBASIC3.13□□□□□ -1.91
RAE1P78406 MIR6134-201ENST00000617606 109 ntBASIC3.13□□□□□ -1.91
RAE1P78406 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.13□□□□□ -1.91
RAE1P78406 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
RAE1P78406 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.13□□□□□ -1.91
RAE1P78406 AL669831.3-213ENST00000636676 183 ntBASIC3.13□□□□□ -1.91
RAE1P78406 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RAE1P78406 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RAE1P78406 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
RAE1P78406 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RAE1P78406 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RAE1P78406 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RAE1P78406 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.12□□□□□ -1.91
RAE1P78406 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RAE1P78406 SNORD56.3-201ENST00000363507 71 ntBASIC3.12□□□□□ -1.91
RAE1P78406 RNU5E-7P-201ENST00000365290 117 ntBASIC3.12□□□□□ -1.91
RAE1P78406 MIR517A-201ENST00000385001 87 ntBASIC3.12□□□□□ -1.91
RAE1P78406 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
RAE1P78406 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
RAE1P78406 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.12□□□□□ -1.91
RAE1P78406 AL159169.1-201ENST00000421119 127 ntBASIC3.12□□□□□ -1.91
RAE1P78406 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.12□□□□□ -1.91
RAE1P78406 AC092017.2-201ENST00000427600 362 ntBASIC3.12□□□□□ -1.91
RAE1P78406 RPS15AP10-201ENST00000432472 382 ntBASIC3.12□□□□□ -1.91
RAE1P78406 HMGN2P20-201ENST00000437531 273 ntBASIC3.12□□□□□ -1.91
RAE1P78406 AC098831.1-201ENST00000440661 216 ntBASIC3.12□□□□□ -1.91
RAE1P78406 DAP3P1-201ENST00000441522 278 ntBASIC3.12□□□□□ -1.91
RAE1P78406 AC013470.1-201ENST00000453438 462 ntBASIC3.12□□□□□ -1.91
RAE1P78406 BTF3P15-201ENST00000455606 336 ntBASIC3.12□□□□□ -1.91
RAE1P78406 ELOCP24-201ENST00000456370 334 ntBASIC3.12□□□□□ -1.91
RAE1P78406 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.12□□□□□ -1.91
RAE1P78406 SNORD5.1-201ENST00000458800 75 ntBASIC3.12□□□□□ -1.91
RAE1P78406 Y_RNA.639-201ENST00000458981 102 ntBASIC3.12□□□□□ -1.91
RAE1P78406 RPL23AP14-201ENST00000468281 468 ntBASIC3.12□□□□□ -1.91
RAE1P78406 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
RAE1P78406 AC005741.1-201ENST00000511094 432 ntBASIC3.12□□□□□ -1.91
RAE1P78406 SNORA64.4-201ENST00000516632 81 ntBASIC3.12□□□□□ -1.91
RAE1P78406 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.12□□□□□ -1.91
RAE1P78406 AP004607.1-201ENST00000524456 203 ntBASIC3.12□□□□□ -1.91
RAE1P78406 NACAP3-201ENST00000552100 481 ntBASIC3.12□□□□□ -1.91
RAE1P78406 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.12□□□□□ -1.91
RAE1P78406 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.12□□□□□ -1.91
RAE1P78406 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.12□□□□□ -1.91
RAE1P78406 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.12□□□□□ -1.91
RAE1P78406 MIR4276-201ENST00000584832 70 ntBASIC3.12□□□□□ -1.91
RAE1P78406 AP000654.2-201ENST00000605633 586 ntBASIC3.12□□□□□ -1.91
RAE1P78406 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC3.12□□□□□ -1.91
RAE1P78406 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.12□□□□□ -1.91
RAE1P78406 AL591516.1-201ENST00000611326 274 ntBASIC3.12□□□□□ -1.91
RAE1P78406 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.12□□□□□ -1.91
RAE1P78406 AC090971.5-201ENST00000621102 293 ntBASIC3.12□□□□□ -1.91
RAE1P78406 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.12□□□□□ -1.91
RAE1P78406 AC007256.1-201ENST00000392253 2765 ntBASIC3.12□□□□□ -1.91
RAE1P78406 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
RAE1P78406 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
RAE1P78406 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RAE1P78406 MTND4P23-201ENST00000447723 1363 ntBASIC3.12□□□□□ -1.91
RAE1P78406 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.11□□□□□ -1.91
RAE1P78406 AC010680.1-201ENST00000590024 3590 ntBASIC3.11□□□□□ -1.91
RAE1P78406 RNU6-78P-201ENST00000362897 107 ntBASIC3.11□□□□□ -1.91
RAE1P78406 SNORD42.2-201ENST00000365570 69 ntBASIC3.11□□□□□ -1.91
RAE1P78406 RNU6-898P-201ENST00000365627 104 ntBASIC3.11□□□□□ -1.91
RAE1P78406 MIR591-201ENST00000385290 95 ntBASIC3.11□□□□□ -1.91
RAE1P78406 SNORA75.4-201ENST00000391278 119 ntBASIC3.11□□□□□ -1.91
RAE1P78406 PTMAP2-201ENST00000397627 327 ntBASIC3.11□□□□□ -1.91
RAE1P78406 Y_RNA.594-201ENST00000410373 140 ntBASIC3.11□□□□□ -1.91
RAE1P78406 RNU6-1050P-201ENST00000410388 107 ntBASIC3.11□□□□□ -1.91
RAE1P78406 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.11□□□□□ -1.91
RAE1P78406 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.11□□□□□ -1.91
RAE1P78406 AC005534.2-201ENST00000431047 433 ntBASIC3.11□□□□□ -1.91
RAE1P78406 MTCYBP6-201ENST00000441810 138 ntBASIC3.11□□□□□ -1.91
RAE1P78406 HIGD1AP2-201ENST00000446367 280 ntBASIC3.11□□□□□ -1.91
RAE1P78406 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.11□□□□□ -1.91
RAE1P78406 AC115115.1-201ENST00000449927 248 ntBASIC3.11□□□□□ -1.91
RAE1P78406 AC006026.2-201ENST00000457376 180 ntBASIC3.11□□□□□ -1.91
RAE1P78406 snoU109.2-201ENST00000459316 135 ntBASIC3.11□□□□□ -1.91
RAE1P78406 RNU6-1037P-201ENST00000459571 107 ntBASIC3.11□□□□□ -1.91
RAE1P78406 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.11□□□□□ -1.91
RAE1P78406 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.11□□□□□ -1.91
RAE1P78406 RPS29P20-201ENST00000489592 171 ntBASIC3.11□□□□□ -1.91
RAE1P78406 AC018437.1-201ENST00000492214 406 ntBASIC3.11□□□□□ -1.91
RAE1P78406 MTCYBP40-201ENST00000509390 1135 ntBASIC3.11□□□□□ -1.91
RAE1P78406 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.11□□□□□ -1.91
RAE1P78406 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.11□□□□□ -1.91
RAE1P78406 AP000867.2-201ENST00000532468 320 ntBASIC3.11□□□□□ -1.91
RAE1P78406 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.11□□□□□ -1.91
RAE1P78406 MIR4474-201ENST00000579189 78 ntBASIC3.11□□□□□ -1.91
RAE1P78406 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms