Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
GABREP78334 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.86□□□□□ -1.79
GABREP78334 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.86□□□□□ -1.79
GABREP78334 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
GABREP78334 CDC27P3-201ENST00000635418 1910 ntBASIC3.85□□□□□ -1.79
GABREP78334 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.85□□□□□ -1.79
GABREP78334 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
GABREP78334 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.85□□□□□ -1.79
GABREP78334 AC005592.1-201ENST00000566527 1640 ntBASIC3.85□□□□□ -1.79
GABREP78334 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.85□□□□□ -1.79
GABREP78334 Y_RNA.39-201ENST00000362620 98 ntBASIC3.85□□□□□ -1.79
GABREP78334 RNU6-1280P-201ENST00000365211 107 ntBASIC3.85□□□□□ -1.79
GABREP78334 SNORA9-201ENST00000384215 133 ntBASIC3.85□□□□□ -1.79
GABREP78334 SNORD116-20-201ENST00000384529 92 ntBASIC3.85□□□□□ -1.79
GABREP78334 MIR491-201ENST00000384877 84 ntBASIC3.85□□□□□ -1.79
GABREP78334 RNU6-985P-201ENST00000410182 104 ntBASIC3.85□□□□□ -1.79
GABREP78334 RNU6-1156P-201ENST00000410365 100 ntBASIC3.85□□□□□ -1.79
GABREP78334 RNU2-23P-201ENST00000410545 195 ntBASIC3.85□□□□□ -1.79
GABREP78334 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.85□□□□□ -1.79
GABREP78334 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.85□□□□□ -1.79
GABREP78334 RBMY1KP-201ENST00000423480 476 ntBASIC3.85□□□□□ -1.79
GABREP78334 AL353748.1-201ENST00000440753 474 ntBASIC3.85□□□□□ -1.79
GABREP78334 SSXP4-201ENST00000451349 245 ntBASIC3.85□□□□□ -1.79
GABREP78334 RPS29P27-201ENST00000463711 170 ntBASIC3.85□□□□□ -1.79
GABREP78334 AC116655.1-201ENST00000508324 901 ntBASIC3.85□□□□□ -1.79
GABREP78334 PPBPP1-201ENST00000510807 373 ntBASIC3.85□□□□□ -1.79
GABREP78334 RNU1-95P-201ENST00000516357 160 ntBASIC3.85□□□□□ -1.79
GABREP78334 RNU6-764P-201ENST00000516396 105 ntBASIC3.85□□□□□ -1.79
GABREP78334 RNU1-128P-201ENST00000516704 160 ntBASIC3.85□□□□□ -1.79
GABREP78334 GNAI2P1-201ENST00000541815 315 ntBASIC3.85□□□□□ -1.79
GABREP78334 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.85□□□□□ -1.79
GABREP78334 MTND6P33-201ENST00000571794 183 ntBASIC3.85□□□□□ -1.79
GABREP78334 AC096577.2-201ENST00000611455 153 ntBASIC3.85□□□□□ -1.79
GABREP78334 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.85□□□□□ -1.79
GABREP78334 MIR7154-201ENST00000620673 73 ntBASIC3.85□□□□□ -1.79
GABREP78334 MIR4727-201ENST00000622232 55 ntBASIC3.85□□□□□ -1.79
GABREP78334 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.85□□□□□ -1.79
GABREP78334 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.85□□□□□ -1.79
GABREP78334 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
GABREP78334 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.79
GABREP78334 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.84□□□□□ -1.79
GABREP78334 AC110491.1-201ENST00000562191 2010 ntBASIC3.84□□□□□ -1.79
GABREP78334 Y_RNA.123-201ENST00000363338 102 ntBASIC3.84□□□□□ -1.79
GABREP78334 SNORA5A-201ENST00000384111 134 ntBASIC3.84□□□□□ -1.79
GABREP78334 BTF3L4P2-201ENST00000392798 346 ntBASIC3.84□□□□□ -1.79
GABREP78334 RNU6-1245P-201ENST00000411130 106 ntBASIC3.84□□□□□ -1.79
GABREP78334 BPY2DP-201ENST00000422208 265 ntBASIC3.84□□□□□ -1.79
GABREP78334 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.84□□□□□ -1.79
GABREP78334 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.84□□□□□ -1.79
GABREP78334 AC005300.1-201ENST00000428401 373 ntBASIC3.84□□□□□ -1.79
GABREP78334 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.84□□□□□ -1.79
GABREP78334 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.84□□□□□ -1.79
GABREP78334 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.84□□□□□ -1.79
GABREP78334 RPS3AP46-201ENST00000448352 682 ntBASIC3.84□□□□□ -1.79
GABREP78334 AC021146.2-201ENST00000504736 556 ntBASIC3.84□□□□□ -1.79
GABREP78334 RNU6-581P-201ENST00000516214 105 ntBASIC3.84□□□□□ -1.79
GABREP78334 SCARNA13-201ENST00000516672 275 ntBASIC3.84□□□□□ -1.79
GABREP78334 SNORA70.24-201ENST00000517233 118 ntBASIC3.84□□□□□ -1.79
GABREP78334 IGLV3-26-201ENST00000520756 302 ntBASIC3.84□□□□□ -1.79
GABREP78334 AP000889.1-201ENST00000530968 660 ntBASIC3.84□□□□□ -1.79
GABREP78334 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.84□□□□□ -1.79
GABREP78334 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.84□□□□□ -1.79
GABREP78334 HMGN2P15-201ENST00000585707 270 ntBASIC3.84□□□□□ -1.79
GABREP78334 AP000942.4-201ENST00000604811 241 ntBASIC3.84□□□□□ -1.79
GABREP78334 AC068831.7-201ENST00000616954 363 ntBASIC3.84□□□□□ -1.79
GABREP78334 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.84□□□□□ -1.79
GABREP78334 AL078596.1-201ENST00000624856 447 ntBASIC3.84□□□□□ -1.79
GABREP78334 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
GABREP78334 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
GABREP78334 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.8
GABREP78334 HSPA8P1-201ENST00000425843 1833 ntBASIC3.84□□□□□ -1.8
GABREP78334 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
GABREP78334 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
GABREP78334 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
GABREP78334 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.83□□□□□ -1.8
GABREP78334 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.83□□□□□ -1.8
GABREP78334 SNORD50.1-201ENST00000362987 71 ntBASIC3.83□□□□□ -1.8
GABREP78334 Y_RNA.80-201ENST00000362996 102 ntBASIC3.83□□□□□ -1.8
GABREP78334 SNORD35B-201ENST00000363660 87 ntBASIC3.83□□□□□ -1.8
GABREP78334 Y_RNA.485-201ENST00000384395 102 ntBASIC3.83□□□□□ -1.8
GABREP78334 MIR93-201ENST00000385024 80 ntBASIC3.83□□□□□ -1.8
GABREP78334 MIR34B-201ENST00000385076 84 ntBASIC3.83□□□□□ -1.8
GABREP78334 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
GABREP78334 AL138885.1-201ENST00000405921 675 ntBASIC3.83□□□□□ -1.8
GABREP78334 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.83□□□□□ -1.8
GABREP78334 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
GABREP78334 HMGN2P10-201ENST00000448085 265 ntBASIC3.83□□□□□ -1.8
GABREP78334 ABCF2P2-201ENST00000450549 296 ntBASIC3.83□□□□□ -1.8
GABREP78334 MRPL42P6-201ENST00000486397 371 ntBASIC3.83□□□□□ -1.8
GABREP78334 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.83□□□□□ -1.8
GABREP78334 SNORA74D-201ENST00000516404 141 ntBASIC3.83□□□□□ -1.8
GABREP78334 RNU4-77P-201ENST00000516692 156 ntBASIC3.83□□□□□ -1.8
GABREP78334 AP000867.2-201ENST00000532468 320 ntBASIC3.83□□□□□ -1.8
GABREP78334 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.83□□□□□ -1.8
GABREP78334 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.83□□□□□ -1.8
GABREP78334 HSBP1P1-201ENST00000555205 166 ntBASIC3.83□□□□□ -1.8
GABREP78334 AC021739.1-201ENST00000559631 174 ntBASIC3.83□□□□□ -1.8
GABREP78334 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.83□□□□□ -1.8
GABREP78334 AC004584.2-201ENST00000570407 410 ntBASIC3.83□□□□□ -1.8
GABREP78334 MIR5696-201ENST00000578474 85 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms