Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 RNU6-600P-201ENST00000362524 99 ntBASIC3.97□□□□□ -1.77
HERVK_113P62684 RNU6-196P-201ENST00000384315 107 ntBASIC3.97□□□□□ -1.77
HERVK_113P62684 RNU6-985P-201ENST00000410182 104 ntBASIC3.97□□□□□ -1.77
HERVK_113P62684 AL030996.1-201ENST00000411430 235 ntBASIC3.97□□□□□ -1.77
HERVK_113P62684 NDUFB4P7-201ENST00000423198 363 ntBASIC3.97□□□□□ -1.77
HERVK_113P62684 AC008267.5-201ENST00000424928 265 ntBASIC3.97□□□□□ -1.77
HERVK_113P62684 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HERVK_113P62684 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.97□□□□□ -1.77
HERVK_113P62684 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.97□□□□□ -1.77
HERVK_113P62684 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HERVK_113P62684 MTATP8P1-201ENST00000467115 207 ntBASIC3.97□□□□□ -1.77
HERVK_113P62684 RN7SL594P-201ENST00000470590 287 ntBASIC3.97□□□□□ -1.77
HERVK_113P62684 RPS23P3-201ENST00000470993 430 ntBASIC3.97□□□□□ -1.77
HERVK_113P62684 KC877373.1-201ENST00000479066 408 ntBASIC3.97□□□□□ -1.77
HERVK_113P62684 RNU6-764P-201ENST00000516396 105 ntBASIC3.97□□□□□ -1.77
HERVK_113P62684 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
HERVK_113P62684 AC023442.1-201ENST00000531247 422 ntBASIC3.97□□□□□ -1.77
HERVK_113P62684 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.97□□□□□ -1.77
HERVK_113P62684 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.97□□□□□ -1.77
HERVK_113P62684 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HERVK_113P62684 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.97□□□□□ -1.77
HERVK_113P62684 MIR5004-201ENST00000579078 107 ntBASIC3.97□□□□□ -1.77
HERVK_113P62684 MIR4276-201ENST00000584832 70 ntBASIC3.97□□□□□ -1.77
HERVK_113P62684 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.97□□□□□ -1.77
HERVK_113P62684 RMST_8.1-201ENST00000610287 165 ntBASIC3.97□□□□□ -1.77
HERVK_113P62684 AL162373.1-201ENST00000620433 407 ntBASIC3.97□□□□□ -1.77
HERVK_113P62684 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.97□□□□□ -1.77
HERVK_113P62684 USP8P1-201ENST00000494673 3183 ntBASIC3.97□□□□□ -1.77
HERVK_113P62684 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.97□□□□□ -1.77
HERVK_113P62684 AL353743.1-202ENST00000431724 1695 ntBASIC3.97□□□□□ -1.77
HERVK_113P62684 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.96□□□□□ -1.78
HERVK_113P62684 MFSD8-233ENST00000641482 4860 ntBASIC3.96□□□□□ -1.78
HERVK_113P62684 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.96□□□□□ -1.78
HERVK_113P62684 TNPO1P3-201ENST00000436471 2662 ntBASIC3.96□□□□□ -1.78
HERVK_113P62684 RNU6-933P-201ENST00000384424 107 ntBASIC3.96□□□□□ -1.78
HERVK_113P62684 Y_RNA.496-201ENST00000384444 101 ntBASIC3.96□□□□□ -1.78
HERVK_113P62684 MIR3074-201ENST00000384885 81 ntBASIC3.96□□□□□ -1.78
HERVK_113P62684 MIR184-201ENST00000384962 84 ntBASIC3.96□□□□□ -1.78
HERVK_113P62684 RNU6-55P-201ENST00000411092 107 ntBASIC3.96□□□□□ -1.78
HERVK_113P62684 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.96□□□□□ -1.78
HERVK_113P62684 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.96□□□□□ -1.78
HERVK_113P62684 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.96□□□□□ -1.78
HERVK_113P62684 PGBD4P6-201ENST00000421501 610 ntBASIC3.96□□□□□ -1.78
HERVK_113P62684 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.96□□□□□ -1.78
HERVK_113P62684 AL590383.1-201ENST00000428602 75 ntBASIC3.96□□□□□ -1.78
HERVK_113P62684 AL031274.1-201ENST00000450334 232 ntBASIC3.96□□□□□ -1.78
HERVK_113P62684 CECR9-201ENST00000453421 199 ntBASIC3.96□□□□□ -1.78
HERVK_113P62684 FABP5P15-201ENST00000453566 214 ntBASIC3.96□□□□□ -1.78
HERVK_113P62684 ANP32BP2-201ENST00000454525 545 ntBASIC3.96□□□□□ -1.78
HERVK_113P62684 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.96□□□□□ -1.78
HERVK_113P62684 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.96□□□□□ -1.78
HERVK_113P62684 SNORA70.16-201ENST00000516390 95 ntBASIC3.96□□□□□ -1.78
HERVK_113P62684 RNA5SP291-201ENST00000517222 105 ntBASIC3.96□□□□□ -1.78
HERVK_113P62684 AP006245.1-201ENST00000522549 120 ntBASIC3.96□□□□□ -1.78
HERVK_113P62684 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.96□□□□□ -1.78
HERVK_113P62684 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.96□□□□□ -1.78
HERVK_113P62684 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.96□□□□□ -1.78
HERVK_113P62684 AC106900.2-201ENST00000604994 317 ntBASIC3.96□□□□□ -1.78
HERVK_113P62684 AL121917.1-203ENST00000605534 577 ntBASIC3.96□□□□□ -1.78
HERVK_113P62684 AC090132.2-201ENST00000615881 347 ntBASIC3.96□□□□□ -1.78
HERVK_113P62684 RMST_4.1-201ENST00000616886 107 ntBASIC3.96□□□□□ -1.78
HERVK_113P62684 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
HERVK_113P62684 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.96□□□□□ -1.78
HERVK_113P62684 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.96□□□□□ -1.78
HERVK_113P62684 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.96□□□□□ -1.78
HERVK_113P62684 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HERVK_113P62684 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HERVK_113P62684 MIR412-201ENST00000362142 91 ntBASIC3.95□□□□□ -1.78
HERVK_113P62684 RNU6-37P-201ENST00000362692 107 ntBASIC3.95□□□□□ -1.78
HERVK_113P62684 RNU6-11P-201ENST00000364234 107 ntBASIC3.95□□□□□ -1.78
HERVK_113P62684 RNU6-7-201ENST00000364784 107 ntBASIC3.95□□□□□ -1.78
HERVK_113P62684 RNU6-8-201ENST00000365467 107 ntBASIC3.95□□□□□ -1.78
HERVK_113P62684 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
HERVK_113P62684 RNU6-25P-201ENST00000383873 107 ntBASIC3.95□□□□□ -1.78
HERVK_113P62684 RNU6-1-201ENST00000383898 107 ntBASIC3.95□□□□□ -1.78
HERVK_113P62684 RNU6-48P-201ENST00000384161 107 ntBASIC3.95□□□□□ -1.78
HERVK_113P62684 RNU6-36P-201ENST00000384172 107 ntBASIC3.95□□□□□ -1.78
HERVK_113P62684 RNU6-4P-201ENST00000384205 107 ntBASIC3.95□□□□□ -1.78
HERVK_113P62684 RNU6-5P-201ENST00000384238 107 ntBASIC3.95□□□□□ -1.78
HERVK_113P62684 RNU6-3P-201ENST00000384314 107 ntBASIC3.95□□□□□ -1.78
HERVK_113P62684 RNU6-16P-201ENST00000384385 107 ntBASIC3.95□□□□□ -1.78
HERVK_113P62684 RNU6-15P-201ENST00000384534 107 ntBASIC3.95□□□□□ -1.78
HERVK_113P62684 RNU6-2-201ENST00000384627 107 ntBASIC3.95□□□□□ -1.78
HERVK_113P62684 RNU6-29P-201ENST00000384637 107 ntBASIC3.95□□□□□ -1.78
HERVK_113P62684 RNU6-9-201ENST00000384776 107 ntBASIC3.95□□□□□ -1.78
HERVK_113P62684 RNU6-33P-201ENST00000384793 107 ntBASIC3.95□□□□□ -1.78
HERVK_113P62684 RNU6-325P-201ENST00000411132 105 ntBASIC3.95□□□□□ -1.78
HERVK_113P62684 AC243428.1-201ENST00000421099 264 ntBASIC3.95□□□□□ -1.78
HERVK_113P62684 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.95□□□□□ -1.78
HERVK_113P62684 AC093151.1-201ENST00000427711 313 ntBASIC3.95□□□□□ -1.78
HERVK_113P62684 TOMM20P4-201ENST00000427861 435 ntBASIC3.95□□□□□ -1.78
HERVK_113P62684 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.95□□□□□ -1.78
HERVK_113P62684 AC006028.1-201ENST00000438379 402 ntBASIC3.95□□□□□ -1.78
HERVK_113P62684 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.95□□□□□ -1.78
HERVK_113P62684 AL583843.1-201ENST00000456070 346 ntBASIC3.95□□□□□ -1.78
HERVK_113P62684 AC084357.1-201ENST00000473404 255 ntBASIC3.95□□□□□ -1.78
HERVK_113P62684 AC011005.2-201ENST00000487324 359 ntBASIC3.95□□□□□ -1.78
HERVK_113P62684 AC068781.1-201ENST00000488231 618 ntBASIC3.95□□□□□ -1.78
HERVK_113P62684 AC015911.1-201ENST00000495111 156 ntBASIC3.95□□□□□ -1.78
HERVK_113P62684 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms