Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 AC104629.1-201ENST00000494226 508 ntBASIC1.11□□□□□ -2.23
LSM6P62312 RPF2P2-201ENST00000504693 896 ntBASIC1.11□□□□□ -2.23
LSM6P62312 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.11□□□□□ -2.23
LSM6P62312 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.11□□□□□ -2.23
LSM6P62312 AC018630.3-201ENST00000542637 96 ntBASIC1.11□□□□□ -2.23
LSM6P62312 MIR3912-201ENST00000577566 105 ntBASIC1.11□□□□□ -2.23
LSM6P62312 VN1R83P-201ENST00000595685 445 ntBASIC1.11□□□□□ -2.23
LSM6P62312 CLIC4P2-201ENST00000601934 717 ntBASIC1.11□□□□□ -2.23
LSM6P62312 AC012065.4-201ENST00000602445 679 ntBASIC1.11□□□□□ -2.23
LSM6P62312 AL050343.2-201ENST00000607338 280 ntBASIC1.11□□□□□ -2.23
LSM6P62312 AC093788.1-201ENST00000609356 927 ntBASIC1.11□□□□□ -2.23
LSM6P62312 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.11□□□□□ -2.23
LSM6P62312 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.11□□□□□ -2.23
LSM6P62312 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.11□□□□□ -2.23
LSM6P62312 MIR3529-201ENST00000637713 78 ntBASIC1.11□□□□□ -2.23
LSM6P62312 AC091812.1-201ENST00000432235 1948 ntBASIC1.11□□□□□ -2.23
LSM6P62312 RNU6-414P-201ENST00000363705 104 ntBASIC1.1□□□□□ -2.23
LSM6P62312 RNU6-1274P-201ENST00000384557 107 ntBASIC1.1□□□□□ -2.23
LSM6P62312 RNU4-62P-201ENST00000410125 130 ntBASIC1.1□□□□□ -2.23
LSM6P62312 CST2P1-201ENST00000425770 87 ntBASIC1.1□□□□□ -2.23
LSM6P62312 HMGB1P31-201ENST00000437242 427 ntBASIC1.1□□□□□ -2.23
LSM6P62312 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.1□□□□□ -2.23
LSM6P62312 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC1.1□□□□□ -2.23
LSM6P62312 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.1□□□□□ -2.23
LSM6P62312 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
LSM6P62312 AP004247.1-201ENST00000531556 1289 ntBASIC1.1□□□□□ -2.23
LSM6P62312 RPL21P5-201ENST00000554662 472 ntBASIC1.1□□□□□ -2.23
LSM6P62312 RPS3AP4-201ENST00000555161 764 ntBASIC1.1□□□□□ -2.23
LSM6P62312 AC005668.1-201ENST00000571142 476 ntBASIC1.1□□□□□ -2.23
LSM6P62312 AC060771.1-201ENST00000582031 164 ntBASIC1.1□□□□□ -2.23
LSM6P62312 BNIP3P27-201ENST00000599991 412 ntBASIC1.1□□□□□ -2.23
LSM6P62312 BNIP3P9-201ENST00000603714 553 ntBASIC1.1□□□□□ -2.23
LSM6P62312 AC025754.2-201ENST00000606491 432 ntBASIC1.1□□□□□ -2.23
LSM6P62312 AC093648.1-201ENST00000623546 606 ntBASIC1.1□□□□□ -2.23
LSM6P62312 AC008993.2-201ENST00000631744 806 ntBASIC1.1□□□□□ -2.23
LSM6P62312 AP000560.1-201ENST00000624150 1937 ntBASIC1.1□□□□□ -2.23
LSM6P62312 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.09□□□□□ -2.23
LSM6P62312 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
LSM6P62312 MIR1267-201ENST00000408723 78 ntBASIC1.09□□□□□ -2.23
LSM6P62312 AC068533.2-201ENST00000411872 306 ntBASIC1.09□□□□□ -2.23
LSM6P62312 RPL37P10-201ENST00000412884 288 ntBASIC1.09□□□□□ -2.23
LSM6P62312 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.09□□□□□ -2.23
LSM6P62312 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.09□□□□□ -2.23
LSM6P62312 MTCO3P5-201ENST00000433620 714 ntBASIC1.09□□□□□ -2.23
LSM6P62312 AL078601.1-201ENST00000444542 271 ntBASIC1.09□□□□□ -2.23
LSM6P62312 USP9YP17-201ENST00000444617 696 ntBASIC1.09□□□□□ -2.23
LSM6P62312 AC009474.2-201ENST00000451383 136 ntBASIC1.09□□□□□ -2.23
LSM6P62312 RNU7-95P-201ENST00000459222 64 ntBASIC1.09□□□□□ -2.23
LSM6P62312 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.09□□□□□ -2.23
LSM6P62312 AC021451.1-201ENST00000523498 1129 ntBASIC1.09□□□□□ -2.23
LSM6P62312 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.09□□□□□ -2.23
LSM6P62312 DNAJC19P9-201ENST00000555084 351 ntBASIC1.09□□□□□ -2.23
LSM6P62312 AC073413.2-201ENST00000604332 360 ntBASIC1.09□□□□□ -2.23
LSM6P62312 AC012467.1-201ENST00000607740 256 ntBASIC1.09□□□□□ -2.23
LSM6P62312 AC004908.3-201ENST00000610248 625 ntBASIC1.09□□□□□ -2.23
LSM6P62312 AC023158.2-201ENST00000614876 543 ntBASIC1.09□□□□□ -2.23
LSM6P62312 uc_338.12-201ENST00000616344 181 ntBASIC1.09□□□□□ -2.23
LSM6P62312 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.09□□□□□ -2.23
LSM6P62312 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.09□□□□□ -2.23
LSM6P62312 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.09□□□□□ -2.23
LSM6P62312 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
LSM6P62312 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
LSM6P62312 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.08□□□□□ -2.24
LSM6P62312 SNORD33-201ENST00000362761 85 ntBASIC1.08□□□□□ -2.24
LSM6P62312 RNU6-655P-201ENST00000362858 107 ntBASIC1.08□□□□□ -2.24
LSM6P62312 RNU6-1284P-201ENST00000363701 100 ntBASIC1.08□□□□□ -2.24
LSM6P62312 SNORA7.1-201ENST00000363750 139 ntBASIC1.08□□□□□ -2.24
LSM6P62312 RNU6-271P-201ENST00000363858 105 ntBASIC1.08□□□□□ -2.24
LSM6P62312 RNU6-487P-201ENST00000365430 104 ntBASIC1.08□□□□□ -2.24
LSM6P62312 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
LSM6P62312 RNU6-439P-201ENST00000384188 106 ntBASIC1.08□□□□□ -2.24
LSM6P62312 MIR29B2-201ENST00000385055 81 ntBASIC1.08□□□□□ -2.24
LSM6P62312 MIR301A-201ENST00000385261 86 ntBASIC1.08□□□□□ -2.24
LSM6P62312 FTH1P15-201ENST00000406984 280 ntBASIC1.08□□□□□ -2.24
LSM6P62312 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC1.08□□□□□ -2.24
LSM6P62312 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.08□□□□□ -2.24
LSM6P62312 MTCYBP42-201ENST00000444653 1130 ntBASIC1.08□□□□□ -2.24
LSM6P62312 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC1.08□□□□□ -2.24
LSM6P62312 RPS29P29-201ENST00000456396 171 ntBASIC1.08□□□□□ -2.24
LSM6P62312 AC087477.1-201ENST00000465747 340 ntBASIC1.08□□□□□ -2.24
LSM6P62312 RPS26P55-201ENST00000471178 356 ntBASIC1.08□□□□□ -2.24
LSM6P62312 MED28P2-201ENST00000475771 317 ntBASIC1.08□□□□□ -2.24
LSM6P62312 RPS3AP22-201ENST00000488297 769 ntBASIC1.08□□□□□ -2.24
LSM6P62312 RPL39P36-201ENST00000490784 156 ntBASIC1.08□□□□□ -2.24
LSM6P62312 RNU6-150P-201ENST00000516237 95 ntBASIC1.08□□□□□ -2.24
LSM6P62312 COPS8P3-201ENST00000526024 482 ntBASIC1.08□□□□□ -2.24
LSM6P62312 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.08□□□□□ -2.24
LSM6P62312 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.08□□□□□ -2.24
LSM6P62312 RAB11AP2-201ENST00000545905 639 ntBASIC1.08□□□□□ -2.24
LSM6P62312 AC023043.2-201ENST00000589678 1026 ntBASIC1.08□□□□□ -2.24
LSM6P62312 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.08□□□□□ -2.24
LSM6P62312 PCMTD1P7-201ENST00000634506 357 ntBASIC1.08□□□□□ -2.24
LSM6P62312 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
LSM6P62312 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC1.07□□□□□ -2.24
LSM6P62312 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
LSM6P62312 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
LSM6P62312 RNU6-858P-201ENST00000362436 107 ntBASIC1.07□□□□□ -2.24
LSM6P62312 RNU6-23P-201ENST00000363283 107 ntBASIC1.07□□□□□ -2.24
LSM6P62312 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.07□□□□□ -2.24
LSM6P62312 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms