Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.68□□□□□ -2.3
LSM3P62310 RNU7-136P-201ENST00000458819 69 ntBASIC0.68□□□□□ -2.3
LSM3P62310 RPL26P26-201ENST00000480251 434 ntBASIC0.68□□□□□ -2.3
LSM3P62310 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC0.68□□□□□ -2.3
LSM3P62310 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC0.68□□□□□ -2.3
LSM3P62310 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.68□□□□□ -2.3
LSM3P62310 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.68□□□□□ -2.3
LSM3P62310 AC009902.1-201ENST00000519351 183 ntBASIC0.68□□□□□ -2.3
LSM3P62310 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.68□□□□□ -2.3
LSM3P62310 MIR4782-201ENST00000577987 79 ntBASIC0.68□□□□□ -2.3
LSM3P62310 AC008088.1-201ENST00000580993 280 ntBASIC0.68□□□□□ -2.3
LSM3P62310 NIFKP6-201ENST00000598115 845 ntBASIC0.68□□□□□ -2.3
LSM3P62310 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.68□□□□□ -2.3
LSM3P62310 AC008945.2-201ENST00000606056 604 ntBASIC0.68□□□□□ -2.3
LSM3P62310 MIR6078-201ENST00000611069 100 ntBASIC0.68□□□□□ -2.3
LSM3P62310 AC090970.3-201ENST00000612566 866 ntBASIC0.68□□□□□ -2.3
LSM3P62310 AC009033.1-201ENST00000624279 431 ntBASIC0.68□□□□□ -2.3
LSM3P62310 AC120349.3-201ENST00000624377 529 ntBASIC0.68□□□□□ -2.3
LSM3P62310 MIR1248-201ENST00000629190 106 ntBASIC0.68□□□□□ -2.3
LSM3P62310 ANKRD20A9P-201ENST00000457997 2978 ntBASIC0.68□□□□□ -2.3
LSM3P62310 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC0.67□□□□□ -2.3
LSM3P62310 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
LSM3P62310 Y_RNA.40-201ENST00000362645 93 ntBASIC0.67□□□□□ -2.3
LSM3P62310 AC083799.1-201ENST00000366451 910 ntBASIC0.67□□□□□ -2.3
LSM3P62310 RNU6-549P-201ENST00000384433 107 ntBASIC0.67□□□□□ -2.3
LSM3P62310 AC139712.2-201ENST00000424302 339 ntBASIC0.67□□□□□ -2.3
LSM3P62310 JTBP1-201ENST00000441314 247 ntBASIC0.67□□□□□ -2.3
LSM3P62310 KATNBL1P3-201ENST00000443475 909 ntBASIC0.67□□□□□ -2.3
LSM3P62310 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC0.67□□□□□ -2.3
LSM3P62310 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC0.67□□□□□ -2.3
LSM3P62310 RPL9P9-202ENST00000466501 579 ntBASIC0.67□□□□□ -2.3
LSM3P62310 LAMTOR3P2-201ENST00000504479 232 ntBASIC0.67□□□□□ -2.3
LSM3P62310 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
LSM3P62310 AC110760.3-202ENST00000515177 371 ntBASIC0.67□□□□□ -2.3
LSM3P62310 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.67□□□□□ -2.3
LSM3P62310 RNU6-548P-201ENST00000517083 115 ntBASIC0.67□□□□□ -2.3
LSM3P62310 AC023538.1-201ENST00000534576 736 ntBASIC0.67□□□□□ -2.3
LSM3P62310 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC0.67□□□□□ -2.3
LSM3P62310 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC0.67□□□□□ -2.3
LSM3P62310 AC025678.1-201ENST00000567861 338 ntBASIC0.67□□□□□ -2.3
LSM3P62310 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC0.67□□□□□ -2.3
LSM3P62310 AP002906.1-201ENST00000603405 233 ntBASIC0.67□□□□□ -2.3
LSM3P62310 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.67□□□□□ -2.3
LSM3P62310 AC018926.1-201ENST00000616335 435 ntBASIC0.67□□□□□ -2.3
LSM3P62310 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.67□□□□□ -2.3
LSM3P62310 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.67□□□□□ -2.3
LSM3P62310 MIR6866-201ENST00000638146 69 ntBASIC0.67□□□□□ -2.3
LSM3P62310 AL391516.1-201ENST00000554380 2449 ntBASIC0.66□□□□□ -2.3
LSM3P62310 HSBP1P2-201ENST00000299671 229 ntBASIC0.66□□□□□ -2.3
LSM3P62310 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
LSM3P62310 Y_RNA.99-201ENST00000363138 105 ntBASIC0.66□□□□□ -2.3
LSM3P62310 RNU6-529P-201ENST00000363383 104 ntBASIC0.66□□□□□ -2.3
LSM3P62310 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC0.66□□□□□ -2.3
LSM3P62310 U6.112-201ENST00000384129 70 ntBASIC0.66□□□□□ -2.3
LSM3P62310 MIR100-201ENST00000385259 80 ntBASIC0.66□□□□□ -2.3
LSM3P62310 AC104651.1-201ENST00000427559 735 ntBASIC0.66□□□□□ -2.3
LSM3P62310 MTCO3P5-201ENST00000433620 714 ntBASIC0.66□□□□□ -2.3
LSM3P62310 SEPT7P5-201ENST00000434048 306 ntBASIC0.66□□□□□ -2.3
LSM3P62310 RPL7P55-201ENST00000450522 746 ntBASIC0.66□□□□□ -2.3
LSM3P62310 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.66□□□□□ -2.3
LSM3P62310 RPL30P6-201ENST00000475925 342 ntBASIC0.66□□□□□ -2.3
LSM3P62310 RPS23P4-201ENST00000487908 423 ntBASIC0.66□□□□□ -2.3
LSM3P62310 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.66□□□□□ -2.3
LSM3P62310 AC114981.1-201ENST00000503897 678 ntBASIC0.66□□□□□ -2.3
LSM3P62310 UBL5P1-201ENST00000507979 193 ntBASIC0.66□□□□□ -2.3
LSM3P62310 MTCYBP40-201ENST00000509390 1135 ntBASIC0.66□□□□□ -2.3
LSM3P62310 RNU6-572P-201ENST00000516724 80 ntBASIC0.66□□□□□ -2.3
LSM3P62310 RN7SKP258-201ENST00000517151 304 ntBASIC0.66□□□□□ -2.3
LSM3P62310 AC087441.2-201ENST00000529141 262 ntBASIC0.66□□□□□ -2.3
LSM3P62310 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC0.66□□□□□ -2.3
LSM3P62310 MIR5094-201ENST00000578766 85 ntBASIC0.66□□□□□ -2.3
LSM3P62310 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC0.66□□□□□ -2.3
LSM3P62310 AP003465.2-201ENST00000602571 373 ntBASIC0.66□□□□□ -2.3
LSM3P62310 AC078795.2-201ENST00000602835 1252 ntBASIC0.66□□□□□ -2.3
LSM3P62310 AC080078.3-201ENST00000605407 463 ntBASIC0.66□□□□□ -2.3
LSM3P62310 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC0.66□□□□□ -2.3
LSM3P62310 MIR6798-201ENST00000612887 67 ntBASIC0.66□□□□□ -2.3
LSM3P62310 FARSBP1-201ENST00000435808 1778 ntBASIC0.65□□□□□ -2.3
LSM3P62310 PCF11-AS1-201ENST00000602322 1516 ntBASIC0.65□□□□□ -2.31
LSM3P62310 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
LSM3P62310 RNU1-22P-201ENST00000363334 158 ntBASIC0.65□□□□□ -2.31
LSM3P62310 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
LSM3P62310 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.65□□□□□ -2.31
LSM3P62310 RNU6-1222P-201ENST00000384615 107 ntBASIC0.65□□□□□ -2.31
LSM3P62310 MIR532-201ENST00000385025 91 ntBASIC0.65□□□□□ -2.31
LSM3P62310 RNA5SP213-201ENST00000391031 106 ntBASIC0.65□□□□□ -2.31
LSM3P62310 AC119751.3-201ENST00000399720 670 ntBASIC0.65□□□□□ -2.31
LSM3P62310 AC006461.1-201ENST00000412637 326 ntBASIC0.65□□□□□ -2.31
LSM3P62310 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.65□□□□□ -2.31
LSM3P62310 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.65□□□□□ -2.31
LSM3P62310 BRK1P2-201ENST00000442875 223 ntBASIC0.65□□□□□ -2.31
LSM3P62310 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.65□□□□□ -2.31
LSM3P62310 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC0.65□□□□□ -2.31
LSM3P62310 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.65□□□□□ -2.31
LSM3P62310 OR6C7P-201ENST00000547875 934 ntBASIC0.65□□□□□ -2.31
LSM3P62310 AC112220.2-201ENST00000605513 533 ntBASIC0.65□□□□□ -2.31
LSM3P62310 uc_338.15-201ENST00000615470 191 ntBASIC0.65□□□□□ -2.31
LSM3P62310 AL357080.1-201ENST00000617394 239 ntBASIC0.65□□□□□ -2.31
LSM3P62310 AC008993.2-201ENST00000631744 806 ntBASIC0.65□□□□□ -2.31
LSM3P62310 RNU6-858P-201ENST00000362436 107 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms