Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AP000867.2-201ENST00000532468 320 ntBASIC2.51□□□□□ -2.01
LMO4P61968 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.51□□□□□ -2.01
LMO4P61968 AL670379.6-201ENST00000603753 252 ntBASIC2.51□□□□□ -2.01
LMO4P61968 HSPE1P7-201ENST00000604681 321 ntBASIC2.51□□□□□ -2.01
LMO4P61968 AC008162.1-201ENST00000604718 254 ntBASIC2.51□□□□□ -2.01
LMO4P61968 AL670379.1-201ENST00000604752 252 ntBASIC2.51□□□□□ -2.01
LMO4P61968 AL670379.5-201ENST00000605253 252 ntBASIC2.51□□□□□ -2.01
LMO4P61968 AL670379.8-201ENST00000605353 252 ntBASIC2.51□□□□□ -2.01
LMO4P61968 AL670379.7-201ENST00000605823 252 ntBASIC2.51□□□□□ -2.01
LMO4P61968 AC022893.3-201ENST00000607665 437 ntBASIC2.51□□□□□ -2.01
LMO4P61968 AC012409.4-201ENST00000612923 249 ntBASIC2.51□□□□□ -2.01
LMO4P61968 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.51□□□□□ -2.01
LMO4P61968 AC103705.1-201ENST00000619013 241 ntBASIC2.51□□□□□ -2.01
LMO4P61968 MIR6852-201ENST00000621699 66 ntBASIC2.51□□□□□ -2.01
LMO4P61968 AC244517.12-201ENST00000623581 663 ntBASIC2.51□□□□□ -2.01
LMO4P61968 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
LMO4P61968 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.51□□□□□ -2.01
LMO4P61968 AC110774.1-201ENST00000623567 2018 ntBASIC2.51□□□□□ -2.01
LMO4P61968 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
LMO4P61968 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
LMO4P61968 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC2.5□□□□□ -2.01
LMO4P61968 RNU6-254P-201ENST00000363377 107 ntBASIC2.5□□□□□ -2.01
LMO4P61968 SNORA14A-201ENST00000364773 135 ntBASIC2.5□□□□□ -2.01
LMO4P61968 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
LMO4P61968 RNU6-701P-201ENST00000384059 107 ntBASIC2.5□□□□□ -2.01
LMO4P61968 MIR325-201ENST00000385260 98 ntBASIC2.5□□□□□ -2.01
LMO4P61968 RNA5SP219-201ENST00000390940 113 ntBASIC2.5□□□□□ -2.01
LMO4P61968 RNU6-308P-201ENST00000390957 107 ntBASIC2.5□□□□□ -2.01
LMO4P61968 MIR1289-1-201ENST00000408836 144 ntBASIC2.5□□□□□ -2.01
LMO4P61968 BX682237.1-201ENST00000415016 335 ntBASIC2.5□□□□□ -2.01
LMO4P61968 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.5□□□□□ -2.01
LMO4P61968 SKA2P1-201ENST00000425592 390 ntBASIC2.5□□□□□ -2.01
LMO4P61968 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.5□□□□□ -2.01
LMO4P61968 AL139132.1-201ENST00000431587 344 ntBASIC2.5□□□□□ -2.01
LMO4P61968 AL512844.2-201ENST00000433990 593 ntBASIC2.5□□□□□ -2.01
LMO4P61968 FABP5P14-201ENST00000437273 393 ntBASIC2.5□□□□□ -2.01
LMO4P61968 RPS12P18-201ENST00000442381 270 ntBASIC2.5□□□□□ -2.01
LMO4P61968 RPL32P28-201ENST00000443577 397 ntBASIC2.5□□□□□ -2.01
LMO4P61968 MTND1P17-201ENST00000448961 204 ntBASIC2.5□□□□□ -2.01
LMO4P61968 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.5□□□□□ -2.01
LMO4P61968 AL031183.1-201ENST00000457667 207 ntBASIC2.5□□□□□ -2.01
LMO4P61968 DYNLL1P5-201ENST00000467158 270 ntBASIC2.5□□□□□ -2.01
LMO4P61968 RPS29P26-201ENST00000477483 171 ntBASIC2.5□□□□□ -2.01
LMO4P61968 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.5□□□□□ -2.01
LMO4P61968 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.5□□□□□ -2.01
LMO4P61968 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.5□□□□□ -2.01
LMO4P61968 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.5□□□□□ -2.01
LMO4P61968 AC093303.1-201ENST00000514549 295 ntBASIC2.5□□□□□ -2.01
LMO4P61968 RNU6-123P-201ENST00000516163 102 ntBASIC2.5□□□□□ -2.01
LMO4P61968 RNU1-143P-201ENST00000516296 146 ntBASIC2.5□□□□□ -2.01
LMO4P61968 IGHV3-76-201ENST00000522465 295 ntBASIC2.5□□□□□ -2.01
LMO4P61968 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.5□□□□□ -2.01
LMO4P61968 IMMP1LP2-201ENST00000552954 492 ntBASIC2.5□□□□□ -2.01
LMO4P61968 HMGB1P14-201ENST00000557424 591 ntBASIC2.5□□□□□ -2.01
LMO4P61968 AC005951.2-201ENST00000576282 495 ntBASIC2.5□□□□□ -2.01
LMO4P61968 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.5□□□□□ -2.01
LMO4P61968 AC023043.2-201ENST00000589678 1026 ntBASIC2.5□□□□□ -2.01
LMO4P61968 U1.23-201ENST00000610293 146 ntBASIC2.5□□□□□ -2.01
LMO4P61968 SDR42E1P2-201ENST00000614861 481 ntBASIC2.5□□□□□ -2.01
LMO4P61968 FAM157A-202ENST00000615155 405 ntBASIC2.5□□□□□ -2.01
LMO4P61968 RNU1-68P-201ENST00000615382 146 ntBASIC2.5□□□□□ -2.01
LMO4P61968 U1.39-201ENST00000621562 146 ntBASIC2.5□□□□□ -2.01
LMO4P61968 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.5□□□□□ -2.01
LMO4P61968 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.5□□□□□ -2.01
LMO4P61968 AL137003.2-201ENST00000606924 2538 ntBASIC2.5□□□□□ -2.01
LMO4P61968 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
LMO4P61968 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
LMO4P61968 AC233263.6-201ENST00000631132 1963 ntBASIC2.5□□□□□ -2.01
LMO4P61968 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.5□□□□□ -2.01
LMO4P61968 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
LMO4P61968 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.49□□□□□ -2.01
LMO4P61968 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
LMO4P61968 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC2.49□□□□□ -2.01
LMO4P61968 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC2.49□□□□□ -2.01
LMO4P61968 AC007785.2-201ENST00000598627 1916 ntBASIC2.49□□□□□ -2.01
LMO4P61968 AC073325.2-201ENST00000339545 159 ntBASIC2.49□□□□□ -2.01
LMO4P61968 RNU1-75P-201ENST00000347264 129 ntBASIC2.49□□□□□ -2.01
LMO4P61968 Y_RNA.31-201ENST00000362574 102 ntBASIC2.49□□□□□ -2.01
LMO4P61968 Y_RNA.135-201ENST00000363439 95 ntBASIC2.49□□□□□ -2.01
LMO4P61968 Y_RNA.146-201ENST00000363549 102 ntBASIC2.49□□□□□ -2.01
LMO4P61968 RNU6-1188P-201ENST00000363795 107 ntBASIC2.49□□□□□ -2.01
LMO4P61968 Y_RNA.212-201ENST00000364177 102 ntBASIC2.49□□□□□ -2.01
LMO4P61968 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.49□□□□□ -2.01
LMO4P61968 SNORA22B-201ENST00000383876 138 ntBASIC2.49□□□□□ -2.01
LMO4P61968 RNU6-741P-201ENST00000383889 107 ntBASIC2.49□□□□□ -2.01
LMO4P61968 Y_RNA.422-201ENST00000384054 114 ntBASIC2.49□□□□□ -2.01
LMO4P61968 MIR184-201ENST00000384962 84 ntBASIC2.49□□□□□ -2.01
LMO4P61968 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
LMO4P61968 SNORA16.2-201ENST00000390991 127 ntBASIC2.49□□□□□ -2.01
LMO4P61968 RNA5SP252-201ENST00000391131 119 ntBASIC2.49□□□□□ -2.01
LMO4P61968 NDUFS5P1-201ENST00000405668 289 ntBASIC2.49□□□□□ -2.01
LMO4P61968 AL139396.1-201ENST00000421137 167 ntBASIC2.49□□□□□ -2.01
LMO4P61968 CALM2P2-201ENST00000428512 440 ntBASIC2.49□□□□□ -2.01
LMO4P61968 AC236972.1-201ENST00000433225 199 ntBASIC2.49□□□□□ -2.01
LMO4P61968 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.49□□□□□ -2.01
LMO4P61968 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC2.49□□□□□ -2.01
LMO4P61968 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.49□□□□□ -2.01
LMO4P61968 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.49□□□□□ -2.01
LMO4P61968 AC083906.5-201ENST00000503722 328 ntBASIC2.49□□□□□ -2.01
LMO4P61968 HIGD1AP13-201ENST00000509878 289 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms