Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 AC022616.8-201ENST00000533569 253 ntBASIC1.65□□□□□ -2.15
CLDN8P56748 CBX3P4-201ENST00000538909 354 ntBASIC1.65□□□□□ -2.15
CLDN8P56748 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.65□□□□□ -2.15
CLDN8P56748 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.65□□□□□ -2.15
CLDN8P56748 AC012065.4-201ENST00000602445 679 ntBASIC1.65□□□□□ -2.15
CLDN8P56748 AC144521.1-201ENST00000607148 956 ntBASIC1.65□□□□□ -2.15
CLDN8P56748 AL022345.1-201ENST00000607292 135 ntBASIC1.65□□□□□ -2.15
CLDN8P56748 MIR15A-201ENST00000607334 83 ntBASIC1.65□□□□□ -2.15
CLDN8P56748 AC093648.1-201ENST00000623546 606 ntBASIC1.65□□□□□ -2.15
CLDN8P56748 AC233981.2-201ENST00000611524 1614 ntBASIC1.65□□□□□ -2.15
CLDN8P56748 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CLDN8P56748 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.64□□□□□ -2.15
CLDN8P56748 RNU6-433P-201ENST00000363216 104 ntBASIC1.64□□□□□ -2.15
CLDN8P56748 RNU6-511P-201ENST00000363496 107 ntBASIC1.64□□□□□ -2.15
CLDN8P56748 RNU6-1210P-201ENST00000363775 107 ntBASIC1.64□□□□□ -2.15
CLDN8P56748 RNU6-960P-201ENST00000364056 120 ntBASIC1.64□□□□□ -2.15
CLDN8P56748 RNU4-42P-201ENST00000364738 142 ntBASIC1.64□□□□□ -2.15
CLDN8P56748 RNU6-234P-201ENST00000365229 104 ntBASIC1.64□□□□□ -2.15
CLDN8P56748 RNU6-946P-201ENST00000383878 107 ntBASIC1.64□□□□□ -2.15
CLDN8P56748 Y_RNA.623-201ENST00000411128 95 ntBASIC1.64□□□□□ -2.15
CLDN8P56748 BX510359.4-201ENST00000423750 193 ntBASIC1.64□□□□□ -2.15
CLDN8P56748 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.64□□□□□ -2.15
CLDN8P56748 AL627311.1-201ENST00000431514 115 ntBASIC1.64□□□□□ -2.15
CLDN8P56748 RPL7P54-201ENST00000438336 674 ntBASIC1.64□□□□□ -2.15
CLDN8P56748 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.64□□□□□ -2.15
CLDN8P56748 AL136380.1-201ENST00000447970 162 ntBASIC1.64□□□□□ -2.15
CLDN8P56748 SSXP1-201ENST00000453640 473 ntBASIC1.64□□□□□ -2.15
CLDN8P56748 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.64□□□□□ -2.15
CLDN8P56748 AC119751.5-201ENST00000514077 770 ntBASIC1.64□□□□□ -2.15
CLDN8P56748 CR383656.8-201ENST00000549046 145 ntBASIC1.64□□□□□ -2.15
CLDN8P56748 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.64□□□□□ -2.15
CLDN8P56748 MIR3122-201ENST00000577243 73 ntBASIC1.64□□□□□ -2.15
CLDN8P56748 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.64□□□□□ -2.15
CLDN8P56748 AC024940.5-201ENST00000622889 474 ntBASIC1.64□□□□□ -2.15
CLDN8P56748 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.64□□□□□ -2.15
CLDN8P56748 FARSBP1-201ENST00000435808 1778 ntBASIC1.64□□□□□ -2.15
CLDN8P56748 Y_RNA.46-201ENST00000362695 102 ntBASIC1.63□□□□□ -2.15
CLDN8P56748 Y_RNA.111-201ENST00000363248 100 ntBASIC1.63□□□□□ -2.15
CLDN8P56748 USP9YP18-201ENST00000425912 695 ntBASIC1.63□□□□□ -2.15
CLDN8P56748 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.63□□□□□ -2.15
CLDN8P56748 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC1.63□□□□□ -2.15
CLDN8P56748 AL121594.1-201ENST00000475906 575 ntBASIC1.63□□□□□ -2.15
CLDN8P56748 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
CLDN8P56748 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.63□□□□□ -2.15
CLDN8P56748 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.63□□□□□ -2.15
CLDN8P56748 AP005660.1-201ENST00000522972 293 ntBASIC1.63□□□□□ -2.15
CLDN8P56748 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.63□□□□□ -2.15
CLDN8P56748 AC091544.4-201ENST00000555268 342 ntBASIC1.63□□□□□ -2.15
CLDN8P56748 AC025678.1-201ENST00000567861 338 ntBASIC1.63□□□□□ -2.15
CLDN8P56748 MIR4285-201ENST00000581001 85 ntBASIC1.63□□□□□ -2.15
CLDN8P56748 AP000860.1-201ENST00000605250 559 ntBASIC1.63□□□□□ -2.15
CLDN8P56748 AC121334.2-201ENST00000605387 271 ntBASIC1.63□□□□□ -2.15
CLDN8P56748 AC103710.2-201ENST00000609912 942 ntBASIC1.63□□□□□ -2.15
CLDN8P56748 AC004908.3-201ENST00000610248 625 ntBASIC1.63□□□□□ -2.15
CLDN8P56748 SCARNA4-202ENST00000625402 129 ntBASIC1.63□□□□□ -2.15
CLDN8P56748 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.63□□□□□ -2.15
CLDN8P56748 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
CLDN8P56748 RNU1-58P-201ENST00000362413 163 ntBASIC1.62□□□□□ -2.15
CLDN8P56748 U8.2-201ENST00000363156 134 ntBASIC1.62□□□□□ -2.15
CLDN8P56748 RNU6-636P-201ENST00000384598 107 ntBASIC1.62□□□□□ -2.15
CLDN8P56748 CBX3P9-201ENST00000402326 552 ntBASIC1.62□□□□□ -2.15
CLDN8P56748 MIR1262-201ENST00000408276 93 ntBASIC1.62□□□□□ -2.15
CLDN8P56748 RNU6-1140P-201ENST00000410517 106 ntBASIC1.62□□□□□ -2.15
CLDN8P56748 RNU2-48P-201ENST00000410694 191 ntBASIC1.62□□□□□ -2.15
CLDN8P56748 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.62□□□□□ -2.15
CLDN8P56748 AC009310.1-201ENST00000414414 451 ntBASIC1.62□□□□□ -2.15
CLDN8P56748 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.62□□□□□ -2.15
CLDN8P56748 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.62□□□□□ -2.15
CLDN8P56748 MTCO3P5-201ENST00000433620 714 ntBASIC1.62□□□□□ -2.15
CLDN8P56748 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CLDN8P56748 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.62□□□□□ -2.15
CLDN8P56748 AC112492.4-201ENST00000456549 352 ntBASIC1.62□□□□□ -2.15
CLDN8P56748 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.62□□□□□ -2.15
CLDN8P56748 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.62□□□□□ -2.15
CLDN8P56748 AC105185.1-201ENST00000518705 535 ntBASIC1.62□□□□□ -2.15
CLDN8P56748 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.62□□□□□ -2.15
CLDN8P56748 AC103810.8-201ENST00000607347 118 ntBASIC1.62□□□□□ -2.15
CLDN8P56748 U6.42-201ENST00000618440 107 ntBASIC1.62□□□□□ -2.15
CLDN8P56748 AC006338.1-201ENST00000618453 749 ntBASIC1.62□□□□□ -2.15
CLDN8P56748 AP000484.1-201ENST00000620067 1252 ntBASIC1.62□□□□□ -2.15
CLDN8P56748 RNU6-72P-201ENST00000384285 79 ntBASIC1.61□□□□□ -2.15
CLDN8P56748 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
CLDN8P56748 BTF3L4P2-201ENST00000392798 346 ntBASIC1.61□□□□□ -2.15
CLDN8P56748 RNA5SP390-201ENST00000410191 113 ntBASIC1.61□□□□□ -2.15
CLDN8P56748 RNU2-23P-201ENST00000410545 195 ntBASIC1.61□□□□□ -2.15
CLDN8P56748 AC092809.3-201ENST00000415453 231 ntBASIC1.61□□□□□ -2.15
CLDN8P56748 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.61□□□□□ -2.15
CLDN8P56748 NDUFB1P2-201ENST00000449477 176 ntBASIC1.61□□□□□ -2.15
CLDN8P56748 snoU109.3-201ENST00000459477 145 ntBASIC1.61□□□□□ -2.15
CLDN8P56748 Y_RNA.689-201ENST00000516589 107 ntBASIC1.61□□□□□ -2.15
CLDN8P56748 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.61□□□□□ -2.15
CLDN8P56748 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.61□□□□□ -2.15
CLDN8P56748 AC135279.1-201ENST00000543493 504 ntBASIC1.61□□□□□ -2.15
CLDN8P56748 MTCYBP33-201ENST00000575007 1130 ntBASIC1.61□□□□□ -2.15
CLDN8P56748 MIR4307-201ENST00000582802 84 ntBASIC1.61□□□□□ -2.15
CLDN8P56748 CLIC4P2-201ENST00000601934 717 ntBASIC1.61□□□□□ -2.15
CLDN8P56748 AL353778.1-201ENST00000603149 408 ntBASIC1.61□□□□□ -2.15
CLDN8P56748 AL022154.1-201ENST00000604698 785 ntBASIC1.61□□□□□ -2.15
CLDN8P56748 AC116312.1-201ENST00000606841 314 ntBASIC1.61□□□□□ -2.15
CLDN8P56748 AC012360.2-201ENST00000609349 391 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms