Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC130324.3-201ENST00000614165 542 ntBASIC1.7□□□□□ -2.14
CLDN6P56747 MIR4509-1-201ENST00000618224 94 ntBASIC1.7□□□□□ -2.14
CLDN6P56747 FRG1KP-201ENST00000623592 341 ntBASIC1.7□□□□□ -2.14
CLDN6P56747 AC008555.8-201ENST00000623602 2168 ntBASIC1.7□□□□□ -2.14
CLDN6P56747 AC091932.3-201ENST00000624223 323 ntBASIC1.7□□□□□ -2.14
CLDN6P56747 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.69□□□□□ -2.14
CLDN6P56747 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
CLDN6P56747 RNU6-858P-201ENST00000362436 107 ntBASIC1.69□□□□□ -2.14
CLDN6P56747 SNORD114-19-201ENST00000363072 75 ntBASIC1.69□□□□□ -2.14
CLDN6P56747 SNORA4.3-201ENST00000365564 137 ntBASIC1.69□□□□□ -2.14
CLDN6P56747 RNU6-166P-201ENST00000384371 107 ntBASIC1.69□□□□□ -2.14
CLDN6P56747 RNU1-57P-201ENST00000384491 166 ntBASIC1.69□□□□□ -2.14
CLDN6P56747 MIR122-201ENST00000385044 85 ntBASIC1.69□□□□□ -2.14
CLDN6P56747 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC1.69□□□□□ -2.14
CLDN6P56747 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.69□□□□□ -2.14
CLDN6P56747 AL591704.1-201ENST00000432574 275 ntBASIC1.69□□□□□ -2.14
CLDN6P56747 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.69□□□□□ -2.14
CLDN6P56747 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.69□□□□□ -2.14
CLDN6P56747 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.69□□□□□ -2.14
CLDN6P56747 MTND6P13-201ENST00000443510 523 ntBASIC1.69□□□□□ -2.14
CLDN6P56747 AL139824.2-201ENST00000458731 1095 ntBASIC1.69□□□□□ -2.14
CLDN6P56747 AC018868.1-201ENST00000491307 315 ntBASIC1.69□□□□□ -2.14
CLDN6P56747 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.69□□□□□ -2.14
CLDN6P56747 RNU6-914P-201ENST00000516749 109 ntBASIC1.69□□□□□ -2.14
CLDN6P56747 AL157871.3-201ENST00000557231 293 ntBASIC1.69□□□□□ -2.14
CLDN6P56747 SUB1P3-201ENST00000564581 315 ntBASIC1.69□□□□□ -2.14
CLDN6P56747 AC026271.5-201ENST00000577873 130 ntBASIC1.69□□□□□ -2.14
CLDN6P56747 RPL30P11-203ENST00000598995 310 ntBASIC1.69□□□□□ -2.14
CLDN6P56747 AL109918.3-201ENST00000603072 338 ntBASIC1.69□□□□□ -2.14
CLDN6P56747 AC005034.5-201ENST00000604219 466 ntBASIC1.69□□□□□ -2.14
CLDN6P56747 AL645939.4-201ENST00000604495 135 ntBASIC1.69□□□□□ -2.14
CLDN6P56747 AC018638.7-201ENST00000605836 1114 ntBASIC1.69□□□□□ -2.14
CLDN6P56747 AP000720.1-201ENST00000625091 483 ntBASIC1.69□□□□□ -2.14
CLDN6P56747 AC103706.2-201ENST00000638080 240 ntBASIC1.69□□□□□ -2.14
CLDN6P56747 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
CLDN6P56747 CENPCP1-201ENST00000533085 2578 ntBASIC1.69□□□□□ -2.14
CLDN6P56747 MTND4P16-201ENST00000466108 1367 ntBASIC1.69□□□□□ -2.14
CLDN6P56747 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
CLDN6P56747 Y_RNA.46-201ENST00000362695 102 ntBASIC1.68□□□□□ -2.14
CLDN6P56747 RNY4P24-201ENST00000362735 96 ntBASIC1.68□□□□□ -2.14
CLDN6P56747 RNY1P10-201ENST00000363268 113 ntBASIC1.68□□□□□ -2.14
CLDN6P56747 Y_RNA.122-201ENST00000363331 96 ntBASIC1.68□□□□□ -2.14
CLDN6P56747 Y_RNA.224-201ENST00000364308 111 ntBASIC1.68□□□□□ -2.14
CLDN6P56747 MIR518A2-201ENST00000384966 87 ntBASIC1.68□□□□□ -2.14
CLDN6P56747 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.68□□□□□ -2.14
CLDN6P56747 AC138623.1-201ENST00000418060 216 ntBASIC1.68□□□□□ -2.14
CLDN6P56747 USP9YP24-201ENST00000434374 697 ntBASIC1.68□□□□□ -2.14
CLDN6P56747 AL451074.3-201ENST00000437709 472 ntBASIC1.68□□□□□ -2.14
CLDN6P56747 USP9YP17-201ENST00000444617 696 ntBASIC1.68□□□□□ -2.14
CLDN6P56747 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.68□□□□□ -2.14
CLDN6P56747 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.68□□□□□ -2.14
CLDN6P56747 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.68□□□□□ -2.14
CLDN6P56747 KATNBL1P6-201ENST00000453433 915 ntBASIC1.68□□□□□ -2.14
CLDN6P56747 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.68□□□□□ -2.14
CLDN6P56747 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.68□□□□□ -2.14
CLDN6P56747 AC105185.1-201ENST00000518705 535 ntBASIC1.68□□□□□ -2.14
CLDN6P56747 AC087441.2-201ENST00000529141 262 ntBASIC1.68□□□□□ -2.14
CLDN6P56747 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.68□□□□□ -2.14
CLDN6P56747 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.68□□□□□ -2.14
CLDN6P56747 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.68□□□□□ -2.14
CLDN6P56747 AC136619.2-201ENST00000563361 631 ntBASIC1.68□□□□□ -2.14
CLDN6P56747 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
CLDN6P56747 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.68□□□□□ -2.14
CLDN6P56747 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.68□□□□□ -2.14
CLDN6P56747 AC243960.4-201ENST00000600532 288 ntBASIC1.68□□□□□ -2.14
CLDN6P56747 AC073410.2-201ENST00000603240 332 ntBASIC1.68□□□□□ -2.14
CLDN6P56747 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.68□□□□□ -2.14
CLDN6P56747 AC108747.1-201ENST00000609508 535 ntBASIC1.68□□□□□ -2.14
CLDN6P56747 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.68□□□□□ -2.14
CLDN6P56747 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.68□□□□□ -2.14
CLDN6P56747 AC027514.1-201ENST00000588561 1603 ntBASIC1.68□□□□□ -2.14
CLDN6P56747 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.68□□□□□ -2.14
CLDN6P56747 Y_RNA.33-201ENST00000362591 102 ntBASIC1.67□□□□□ -2.14
CLDN6P56747 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
CLDN6P56747 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
CLDN6P56747 RNA5SP489-201ENST00000410986 109 ntBASIC1.67□□□□□ -2.14
CLDN6P56747 AC092809.3-201ENST00000415453 231 ntBASIC1.67□□□□□ -2.14
CLDN6P56747 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.67□□□□□ -2.14
CLDN6P56747 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.67□□□□□ -2.14
CLDN6P56747 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.67□□□□□ -2.14
CLDN6P56747 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.67□□□□□ -2.14
CLDN6P56747 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.67□□□□□ -2.14
CLDN6P56747 AC109927.2-201ENST00000506416 303 ntBASIC1.67□□□□□ -2.14
CLDN6P56747 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CLDN6P56747 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.67□□□□□ -2.14
CLDN6P56747 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.67□□□□□ -2.14
CLDN6P56747 MIR4307-201ENST00000582802 84 ntBASIC1.67□□□□□ -2.14
CLDN6P56747 ELOCP5-201ENST00000604924 333 ntBASIC1.67□□□□□ -2.14
CLDN6P56747 AC093788.1-201ENST00000609356 927 ntBASIC1.67□□□□□ -2.14
CLDN6P56747 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.67□□□□□ -2.14
CLDN6P56747 uc_338.12-201ENST00000616344 181 ntBASIC1.67□□□□□ -2.14
CLDN6P56747 AC021755.4-201ENST00000616620 456 ntBASIC1.67□□□□□ -2.14
CLDN6P56747 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.67□□□□□ -2.14
CLDN6P56747 RNU5E-1-201ENST00000362477 120 ntBASIC1.66□□□□□ -2.14
CLDN6P56747 Y_RNA.116-201ENST00000363292 103 ntBASIC1.66□□□□□ -2.14
CLDN6P56747 RNU6-190P-201ENST00000384154 102 ntBASIC1.66□□□□□ -2.14
CLDN6P56747 U8.14-201ENST00000390843 143 ntBASIC1.66□□□□□ -2.14
CLDN6P56747 AC016831.2-201ENST00000417179 352 ntBASIC1.66□□□□□ -2.14
CLDN6P56747 AC009518.2-201ENST00000418056 731 ntBASIC1.66□□□□□ -2.14
CLDN6P56747 AC008267.5-201ENST00000424928 265 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms