Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 DPPA3P1-201ENST00000448050 469 ntBASIC2.45□□□□□ -2.02
PEX3P56589 FABP5P13-201ENST00000452144 328 ntBASIC2.45□□□□□ -2.02
PEX3P56589 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.45□□□□□ -2.02
PEX3P56589 RNU7-182P-201ENST00000459009 62 ntBASIC2.45□□□□□ -2.02
PEX3P56589 AC107626.1-201ENST00000471084 183 ntBASIC2.45□□□□□ -2.02
PEX3P56589 TRBV12-1-201ENST00000479785 344 ntBASIC2.45□□□□□ -2.02
PEX3P56589 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.45□□□□□ -2.02
PEX3P56589 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.45□□□□□ -2.02
PEX3P56589 RPL9P6-201ENST00000492764 598 ntBASIC2.45□□□□□ -2.02
PEX3P56589 RPS27P26-201ENST00000494583 239 ntBASIC2.45□□□□□ -2.02
PEX3P56589 ANXA2P1-201ENST00000505539 926 ntBASIC2.45□□□□□ -2.02
PEX3P56589 RNU6-720P-201ENST00000516363 108 ntBASIC2.45□□□□□ -2.02
PEX3P56589 IGLV3-17-201ENST00000519099 244 ntBASIC2.45□□□□□ -2.02
PEX3P56589 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.45□□□□□ -2.02
PEX3P56589 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.45□□□□□ -2.02
PEX3P56589 OR5AL2P-201ENST00000532185 920 ntBASIC2.45□□□□□ -2.02
PEX3P56589 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.45□□□□□ -2.02
PEX3P56589 MYL12BP1-201ENST00000569826 507 ntBASIC2.45□□□□□ -2.02
PEX3P56589 Z84480.1-201ENST00000605131 311 ntBASIC2.45□□□□□ -2.02
PEX3P56589 AP001330.5-201ENST00000607176 411 ntBASIC2.45□□□□□ -2.02
PEX3P56589 AC126118.1-201ENST00000607744 628 ntBASIC2.45□□□□□ -2.02
PEX3P56589 HULC.1-201ENST00000612720 240 ntBASIC2.45□□□□□ -2.02
PEX3P56589 AC004852.3-201ENST00000614131 326 ntBASIC2.45□□□□□ -2.02
PEX3P56589 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.45□□□□□ -2.02
PEX3P56589 AC068792.1-201ENST00000621354 417 ntBASIC2.45□□□□□ -2.02
PEX3P56589 MIR6873-201ENST00000622788 63 ntBASIC2.45□□□□□ -2.02
PEX3P56589 AC139792.2-201ENST00000624218 587 ntBASIC2.45□□□□□ -2.02
PEX3P56589 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.45□□□□□ -2.02
PEX3P56589 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.45□□□□□ -2.02
PEX3P56589 ZNF658B-202ENST00000615961 3375 ntBASIC2.45□□□□□ -2.02
PEX3P56589 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
PEX3P56589 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.44□□□□□ -2.02
PEX3P56589 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.44□□□□□ -2.02
PEX3P56589 Y_RNA.33-201ENST00000362591 102 ntBASIC2.44□□□□□ -2.02
PEX3P56589 RNU6-371P-201ENST00000364283 108 ntBASIC2.44□□□□□ -2.02
PEX3P56589 RNU6-1029P-201ENST00000384109 107 ntBASIC2.44□□□□□ -2.02
PEX3P56589 RNU6-1042P-201ENST00000384204 107 ntBASIC2.44□□□□□ -2.02
PEX3P56589 RNU6-166P-201ENST00000384371 107 ntBASIC2.44□□□□□ -2.02
PEX3P56589 Y_RNA.517-201ENST00000384551 106 ntBASIC2.44□□□□□ -2.02
PEX3P56589 SNORA80E-201ENST00000384744 137 ntBASIC2.44□□□□□ -2.02
PEX3P56589 MIR518D-201ENST00000385014 87 ntBASIC2.44□□□□□ -2.02
PEX3P56589 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
PEX3P56589 RNU6-550P-201ENST00000391057 101 ntBASIC2.44□□□□□ -2.02
PEX3P56589 RNU2-9P-201ENST00000410194 145 ntBASIC2.44□□□□□ -2.02
PEX3P56589 OR6C66P-201ENST00000414917 930 ntBASIC2.44□□□□□ -2.02
PEX3P56589 AL353729.1-201ENST00000425044 720 ntBASIC2.44□□□□□ -2.02
PEX3P56589 AL356320.1-201ENST00000429616 163 ntBASIC2.44□□□□□ -2.02
PEX3P56589 AC092427.1-202ENST00000430569 476 ntBASIC2.44□□□□□ -2.02
PEX3P56589 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.44□□□□□ -2.02
PEX3P56589 AL596276.1-201ENST00000434465 418 ntBASIC2.44□□□□□ -2.02
PEX3P56589 AC002486.1-201ENST00000435098 391 ntBASIC2.44□□□□□ -2.02
PEX3P56589 RPS15AP5-201ENST00000436276 388 ntBASIC2.44□□□□□ -2.02
PEX3P56589 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.44□□□□□ -2.02
PEX3P56589 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.44□□□□□ -2.02
PEX3P56589 AL118520.1-201ENST00000450770 291 ntBASIC2.44□□□□□ -2.02
PEX3P56589 AC003071.1-201ENST00000451219 789 ntBASIC2.44□□□□□ -2.02
PEX3P56589 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.44□□□□□ -2.02
PEX3P56589 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.44□□□□□ -2.02
PEX3P56589 RPS29P15-201ENST00000458329 171 ntBASIC2.44□□□□□ -2.02
PEX3P56589 AC092436.1-201ENST00000506450 503 ntBASIC2.44□□□□□ -2.02
PEX3P56589 MTCO3P9-201ENST00000506989 781 ntBASIC2.44□□□□□ -2.02
PEX3P56589 RN7SKP219-201ENST00000516825 296 ntBASIC2.44□□□□□ -2.02
PEX3P56589 RNU6-1183P-201ENST00000517054 60 ntBASIC2.44□□□□□ -2.02
PEX3P56589 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.44□□□□□ -2.02
PEX3P56589 AC025755.1-201ENST00000521306 278 ntBASIC2.44□□□□□ -2.02
PEX3P56589 AP000889.2-201ENST00000532684 490 ntBASIC2.44□□□□□ -2.02
PEX3P56589 AP003034.1-201ENST00000534621 422 ntBASIC2.44□□□□□ -2.02
PEX3P56589 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.44□□□□□ -2.02
PEX3P56589 SNRPGP18-201ENST00000553000 214 ntBASIC2.44□□□□□ -2.02
PEX3P56589 AC121758.2-201ENST00000553271 193 ntBASIC2.44□□□□□ -2.02
PEX3P56589 MIR4703-201ENST00000577728 79 ntBASIC2.44□□□□□ -2.02
PEX3P56589 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.44□□□□□ -2.02
PEX3P56589 AC009831.4-201ENST00000620744 325 ntBASIC2.44□□□□□ -2.02
PEX3P56589 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.44□□□□□ -2.02
PEX3P56589 SEPT14P19-203ENST00000633205 211 ntBASIC2.44□□□□□ -2.02
PEX3P56589 OR5AK4P-201ENST00000635912 903 ntBASIC2.44□□□□□ -2.02
PEX3P56589 MIR203B-201ENST00000636080 86 ntBASIC2.44□□□□□ -2.02
PEX3P56589 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.44□□□□□ -2.02
PEX3P56589 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
PEX3P56589 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
PEX3P56589 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.44□□□□□ -2.02
PEX3P56589 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
PEX3P56589 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.43□□□□□ -2.02
PEX3P56589 SNORD3E-201ENST00000362899 217 ntBASIC2.43□□□□□ -2.02
PEX3P56589 SNORA67.1-201ENST00000364749 141 ntBASIC2.43□□□□□ -2.02
PEX3P56589 RNU6-395P-201ENST00000365662 106 ntBASIC2.43□□□□□ -2.02
PEX3P56589 MIR578-201ENST00000384828 96 ntBASIC2.43□□□□□ -2.02
PEX3P56589 RNU6-1158P-201ENST00000391167 107 ntBASIC2.43□□□□□ -2.02
PEX3P56589 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.43□□□□□ -2.02
PEX3P56589 RNA5SP425-201ENST00000410336 112 ntBASIC2.43□□□□□ -2.02
PEX3P56589 RNU6-1025P-201ENST00000410629 104 ntBASIC2.43□□□□□ -2.02
PEX3P56589 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.43□□□□□ -2.02
PEX3P56589 AL135786.1-201ENST00000415892 214 ntBASIC2.43□□□□□ -2.02
PEX3P56589 AL513477.1-202ENST00000417061 214 ntBASIC2.43□□□□□ -2.02
PEX3P56589 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.43□□□□□ -2.02
PEX3P56589 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.43□□□□□ -2.02
PEX3P56589 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.43□□□□□ -2.02
PEX3P56589 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.43□□□□□ -2.02
PEX3P56589 AC104058.1-201ENST00000448028 297 ntBASIC2.43□□□□□ -2.02
PEX3P56589 HMGN2P10-201ENST00000448085 265 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms