Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 TPMTP3-201ENST00000411928 735 ntBASIC1.02□□□□□ -2.25
NUP98P52948 AC092634.2-201ENST00000428146 1010 ntBASIC1.02□□□□□ -2.25
NUP98P52948 AL354941.1-201ENST00000438600 464 ntBASIC1.02□□□□□ -2.25
NUP98P52948 RNA5SP57-201ENST00000459463 123 ntBASIC1.02□□□□□ -2.25
NUP98P52948 AP001324.2-201ENST00000461163 319 ntBASIC1.02□□□□□ -2.25
NUP98P52948 TMEM251P1-201ENST00000503717 318 ntBASIC1.02□□□□□ -2.25
NUP98P52948 RNU6-678P-201ENST00000516832 109 ntBASIC1.02□□□□□ -2.25
NUP98P52948 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.02□□□□□ -2.25
NUP98P52948 AL022345.1-201ENST00000607292 135 ntBASIC1.02□□□□□ -2.25
NUP98P52948 AC009974.1-201ENST00000608881 455 ntBASIC1.02□□□□□ -2.25
NUP98P52948 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.02□□□□□ -2.25
NUP98P52948 RNU1-58P-201ENST00000362413 163 ntBASIC1.01□□□□□ -2.25
NUP98P52948 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
NUP98P52948 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC1.01□□□□□ -2.25
NUP98P52948 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.01□□□□□ -2.25
NUP98P52948 AL139421.1-201ENST00000423010 169 ntBASIC1.01□□□□□ -2.25
NUP98P52948 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.01□□□□□ -2.25
NUP98P52948 UBE2V1P4-201ENST00000425374 344 ntBASIC1.01□□□□□ -2.25
NUP98P52948 USP9YP18-201ENST00000425912 695 ntBASIC1.01□□□□□ -2.25
NUP98P52948 MTCO2P20-201ENST00000437339 673 ntBASIC1.01□□□□□ -2.25
NUP98P52948 RNU6-970P-201ENST00000516312 107 ntBASIC1.01□□□□□ -2.25
NUP98P52948 SNORA76.2-201ENST00000517095 137 ntBASIC1.01□□□□□ -2.25
NUP98P52948 AC023825.1-201ENST00000566704 1030 ntBASIC1.01□□□□□ -2.25
NUP98P52948 AL583856.2-201ENST00000606298 543 ntBASIC1.01□□□□□ -2.25
NUP98P52948 AC231657.1-201ENST00000624313 397 ntBASIC1.01□□□□□ -2.25
NUP98P52948 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.01□□□□□ -2.25
NUP98P52948 RNU6-1207P-201ENST00000384343 107 ntBASIC1.01□□□□□ -2.25
NUP98P52948 MIR30A-201ENST00000385092 71 ntBASIC1.01□□□□□ -2.25
NUP98P52948 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.01□□□□□ -2.25
NUP98P52948 RNA5SP165-201ENST00000517142 115 ntBASIC1.01□□□□□ -2.25
NUP98P52948 MTCO2P15-201ENST00000532655 656 ntBASIC1.01□□□□□ -2.25
NUP98P52948 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.01□□□□□ -2.25
NUP98P52948 HSPE1P4-201ENST00000550617 308 ntBASIC1.01□□□□□ -2.25
NUP98P52948 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.01□□□□□ -2.25
NUP98P52948 AC026741.1-201ENST00000605892 482 ntBASIC1.01□□□□□ -2.25
NUP98P52948 MIR8074-201ENST00000615081 81 ntBASIC1.01□□□□□ -2.25
NUP98P52948 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1□□□□□ -2.25
NUP98P52948 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1□□□□□ -2.25
NUP98P52948 SNORA25B-201ENST00000365507 128 ntBASIC1□□□□□ -2.25
NUP98P52948 RNY1P4-201ENST00000384595 115 ntBASIC1□□□□□ -2.25
NUP98P52948 NCOR1P3-201ENST00000420479 303 ntBASIC1□□□□□ -2.25
NUP98P52948 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1□□□□□ -2.25
NUP98P52948 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1□□□□□ -2.25
NUP98P52948 AL161651.1-201ENST00000440882 223 ntBASIC1□□□□□ -2.25
NUP98P52948 OFD1P7Y-201ENST00000454643 1155 ntBASIC1□□□□□ -2.25
NUP98P52948 AC112492.4-201ENST00000456549 352 ntBASIC1□□□□□ -2.25
NUP98P52948 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC1□□□□□ -2.25
NUP98P52948 SNORA48.11-201ENST00000517015 89 ntBASIC1□□□□□ -2.25
NUP98P52948 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1□□□□□ -2.25
NUP98P52948 MRPS36P5-201ENST00000551909 298 ntBASIC1□□□□□ -2.25
NUP98P52948 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1□□□□□ -2.25
NUP98P52948 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
NUP98P52948 AC138393.1-203ENST00000327086 343 ntBASIC0.99□□□□□ -2.25
NUP98P52948 Y_RNA.295-201ENST00000364918 102 ntBASIC0.99□□□□□ -2.25
NUP98P52948 RNU6-658P-201ENST00000384606 106 ntBASIC0.99□□□□□ -2.25
NUP98P52948 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
NUP98P52948 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
NUP98P52948 RPL21P24-201ENST00000413752 448 ntBASIC0.99□□□□□ -2.25
NUP98P52948 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC0.99□□□□□ -2.25
NUP98P52948 MTCO3P5-201ENST00000433620 714 ntBASIC0.99□□□□□ -2.25
NUP98P52948 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC0.99□□□□□ -2.25
NUP98P52948 CECR9-201ENST00000453421 199 ntBASIC0.99□□□□□ -2.25
NUP98P52948 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.99□□□□□ -2.25
NUP98P52948 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.99□□□□□ -2.25
NUP98P52948 RNU6-714P-201ENST00000516963 103 ntBASIC0.99□□□□□ -2.25
NUP98P52948 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.99□□□□□ -2.25
NUP98P52948 MIR4422-201ENST00000581938 83 ntBASIC0.99□□□□□ -2.25
NUP98P52948 AC069304.2-201ENST00000605154 435 ntBASIC0.99□□□□□ -2.25
NUP98P52948 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC0.99□□□□□ -2.25
NUP98P52948 AC120349.2-201ENST00000625002 298 ntBASIC0.99□□□□□ -2.25
NUP98P52948 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.99□□□□□ -2.25
NUP98P52948 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.99□□□□□ -2.25
NUP98P52948 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.99□□□□□ -2.25
NUP98P52948 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
NUP98P52948 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.99□□□□□ -2.25
NUP98P52948 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC0.99□□□□□ -2.25
NUP98P52948 EIF4EP2-201ENST00000422816 654 ntBASIC0.99□□□□□ -2.25
NUP98P52948 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.99□□□□□ -2.25
NUP98P52948 AC020550.1-201ENST00000447385 163 ntBASIC0.99□□□□□ -2.25
NUP98P52948 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC0.99□□□□□ -2.25
NUP98P52948 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC0.99□□□□□ -2.25
NUP98P52948 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.99□□□□□ -2.25
NUP98P52948 MIR4782-201ENST00000577987 79 ntBASIC0.99□□□□□ -2.25
NUP98P52948 CYP2C61P-201ENST00000604072 290 ntBASIC0.99□□□□□ -2.25
NUP98P52948 AC034229.4-201ENST00000607861 441 ntBASIC0.99□□□□□ -2.25
NUP98P52948 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.99□□□□□ -2.25
NUP98P52948 MIR6835-201ENST00000621552 64 ntBASIC0.99□□□□□ -2.25
NUP98P52948 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
NUP98P52948 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.98□□□□□ -2.25
NUP98P52948 SNORD114-19-201ENST00000363072 75 ntBASIC0.98□□□□□ -2.25
NUP98P52948 RNU6-1167P-201ENST00000363227 94 ntBASIC0.98□□□□□ -2.25
NUP98P52948 RPL30P13-201ENST00000418873 348 ntBASIC0.98□□□□□ -2.25
NUP98P52948 BX119904.4-201ENST00000424402 301 ntBASIC0.98□□□□□ -2.25
NUP98P52948 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.98□□□□□ -2.25
NUP98P52948 C1DP1-201ENST00000426049 402 ntBASIC0.98□□□□□ -2.25
NUP98P52948 DPRXP1-201ENST00000426312 460 ntBASIC0.98□□□□□ -2.25
NUP98P52948 HSPE1P21-201ENST00000438283 308 ntBASIC0.98□□□□□ -2.25
NUP98P52948 MTCO3P45-201ENST00000443036 613 ntBASIC0.98□□□□□ -2.25
NUP98P52948 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.98□□□□□ -2.25
NUP98P52948 AC012308.1-201ENST00000451232 178 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms