Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 MIR514A3-201ENST00000385132 88 ntBASIC2.79□□□□□ -1.96
CLK1P49759 RNU6-278P-201ENST00000390945 109 ntBASIC2.79□□□□□ -1.96
CLK1P49759 RNU2-39P-201ENST00000410604 198 ntBASIC2.79□□□□□ -1.96
CLK1P49759 RNU6-1328P-201ENST00000410938 106 ntBASIC2.79□□□□□ -1.96
CLK1P49759 PDCL2P1-201ENST00000419302 352 ntBASIC2.79□□□□□ -1.96
CLK1P49759 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.79□□□□□ -1.96
CLK1P49759 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.79□□□□□ -1.96
CLK1P49759 EIF4EP4-201ENST00000424916 578 ntBASIC2.79□□□□□ -1.96
CLK1P49759 GPM6BP2-201ENST00000432046 144 ntBASIC2.79□□□□□ -1.96
CLK1P49759 AC236972.1-201ENST00000433225 199 ntBASIC2.79□□□□□ -1.96
CLK1P49759 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.79□□□□□ -1.96
CLK1P49759 GPM6BP1-201ENST00000446387 144 ntBASIC2.79□□□□□ -1.96
CLK1P49759 UBE2V1P7-201ENST00000446395 340 ntBASIC2.79□□□□□ -1.96
CLK1P49759 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.79□□□□□ -1.96
CLK1P49759 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.79□□□□□ -1.96
CLK1P49759 CECR9-201ENST00000453421 199 ntBASIC2.79□□□□□ -1.96
CLK1P49759 RPS29P15-201ENST00000458329 171 ntBASIC2.79□□□□□ -1.96
CLK1P49759 AC073901.1-201ENST00000462471 408 ntBASIC2.79□□□□□ -1.96
CLK1P49759 AC006512.1-201ENST00000468816 291 ntBASIC2.79□□□□□ -1.96
CLK1P49759 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.79□□□□□ -1.96
CLK1P49759 RPL38P4-201ENST00000502376 214 ntBASIC2.79□□□□□ -1.96
CLK1P49759 AC116562.3-201ENST00000506136 177 ntBASIC2.79□□□□□ -1.96
CLK1P49759 AC026427.2-201ENST00000506228 536 ntBASIC2.79□□□□□ -1.96
CLK1P49759 AC010486.1-201ENST00000511793 424 ntBASIC2.79□□□□□ -1.96
CLK1P49759 RNA5SP76-201ENST00000516277 87 ntBASIC2.79□□□□□ -1.96
CLK1P49759 RNU1-103P-201ENST00000516502 125 ntBASIC2.79□□□□□ -1.96
CLK1P49759 RN7SKP219-201ENST00000516825 296 ntBASIC2.79□□□□□ -1.96
CLK1P49759 RNU6-826P-201ENST00000516827 104 ntBASIC2.79□□□□□ -1.96
CLK1P49759 RNA5SP165-201ENST00000517142 115 ntBASIC2.79□□□□□ -1.96
CLK1P49759 AC068587.5-201ENST00000528506 175 ntBASIC2.79□□□□□ -1.96
CLK1P49759 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.79□□□□□ -1.96
CLK1P49759 AC123904.3-201ENST00000547218 814 ntBASIC2.79□□□□□ -1.96
CLK1P49759 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.79□□□□□ -1.96
CLK1P49759 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.79□□□□□ -1.96
CLK1P49759 MIR4765-201ENST00000585007 77 ntBASIC2.79□□□□□ -1.96
CLK1P49759 MIR4719-201ENST00000585233 84 ntBASIC2.79□□□□□ -1.96
CLK1P49759 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.79□□□□□ -1.96
CLK1P49759 AL356055.1-201ENST00000602528 446 ntBASIC2.79□□□□□ -1.96
CLK1P49759 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.79□□□□□ -1.96
CLK1P49759 AC107294.1-201ENST00000609524 467 ntBASIC2.79□□□□□ -1.96
CLK1P49759 DUSP12P1-201ENST00000612874 516 ntBASIC2.79□□□□□ -1.96
CLK1P49759 uc_338.14-201ENST00000613162 166 ntBASIC2.79□□□□□ -1.96
CLK1P49759 AP001486.3-201ENST00000615334 372 ntBASIC2.79□□□□□ -1.96
CLK1P49759 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CLK1P49759 AL359697.1-201ENST00000624879 587 ntBASIC2.79□□□□□ -1.96
CLK1P49759 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.79□□□□□ -1.96
CLK1P49759 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CLK1P49759 AC000403.1-201ENST00000613696 3585 ntBASIC2.79□□□□□ -1.96
CLK1P49759 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CLK1P49759 AL035425.3-201ENST00000564206 4996 ntBASIC2.78□□□□□ -1.96
CLK1P49759 RNU6-778P-201ENST00000363269 103 ntBASIC2.78□□□□□ -1.96
CLK1P49759 RNU6-188P-201ENST00000364207 107 ntBASIC2.78□□□□□ -1.96
CLK1P49759 SNORA62.1-201ENST00000364287 154 ntBASIC2.78□□□□□ -1.96
CLK1P49759 MIR218-1-201ENST00000384999 110 ntBASIC2.78□□□□□ -1.96
CLK1P49759 MIR181B1-201ENST00000385240 110 ntBASIC2.78□□□□□ -1.96
CLK1P49759 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
CLK1P49759 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
CLK1P49759 UBE2V1P2-201ENST00000397758 440 ntBASIC2.78□□□□□ -1.96
CLK1P49759 UBA52P6-201ENST00000399822 382 ntBASIC2.78□□□□□ -1.96
CLK1P49759 AL359634.1-202ENST00000404721 284 ntBASIC2.78□□□□□ -1.96
CLK1P49759 AL451074.5-201ENST00000415894 435 ntBASIC2.78□□□□□ -1.96
CLK1P49759 AL513185.2-201ENST00000425543 193 ntBASIC2.78□□□□□ -1.96
CLK1P49759 MTND4P28-201ENST00000426217 387 ntBASIC2.78□□□□□ -1.96
CLK1P49759 HMGB1P27-201ENST00000431429 603 ntBASIC2.78□□□□□ -1.96
CLK1P49759 AL118520.1-201ENST00000450770 291 ntBASIC2.78□□□□□ -1.96
CLK1P49759 GSTA11P-201ENST00000452866 669 ntBASIC2.78□□□□□ -1.96
CLK1P49759 AL441985.1-201ENST00000457727 251 ntBASIC2.78□□□□□ -1.96
CLK1P49759 RPL21P41-201ENST00000459863 264 ntBASIC2.78□□□□□ -1.96
CLK1P49759 AC008571.1-201ENST00000467232 300 ntBASIC2.78□□□□□ -1.96
CLK1P49759 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.78□□□□□ -1.96
CLK1P49759 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.78□□□□□ -1.96
CLK1P49759 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.78□□□□□ -1.96
CLK1P49759 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.78□□□□□ -1.96
CLK1P49759 AC105417.1-201ENST00000514691 285 ntBASIC2.78□□□□□ -1.96
CLK1P49759 MIR892C-201ENST00000516410 77 ntBASIC2.78□□□□□ -1.96
CLK1P49759 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CLK1P49759 PSMA2P1-201ENST00000526365 646 ntBASIC2.78□□□□□ -1.96
CLK1P49759 AC009127.3-201ENST00000570531 403 ntBASIC2.78□□□□□ -1.96
CLK1P49759 MIR3605-201ENST00000583214 100 ntBASIC2.78□□□□□ -1.96
CLK1P49759 RPS15AP11-201ENST00000594193 385 ntBASIC2.78□□□□□ -1.96
CLK1P49759 AC021646.1-201ENST00000605469 484 ntBASIC2.78□□□□□ -1.96
CLK1P49759 U2.21-201ENST00000637295 81 ntBASIC2.78□□□□□ -1.96
CLK1P49759 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.78□□□□□ -1.96
CLK1P49759 MTND5P17-201ENST00000418405 1603 ntBASIC2.78□□□□□ -1.96
CLK1P49759 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CLK1P49759 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
CLK1P49759 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.77□□□□□ -1.97
CLK1P49759 ASNSP3-201ENST00000451989 1306 ntBASIC2.77□□□□□ -1.97
CLK1P49759 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
CLK1P49759 RNU6-1284P-201ENST00000363701 100 ntBASIC2.77□□□□□ -1.97
CLK1P49759 SNORD46.1-201ENST00000364139 104 ntBASIC2.77□□□□□ -1.97
CLK1P49759 Y_RNA.813-201ENST00000364639 102 ntBASIC2.77□□□□□ -1.97
CLK1P49759 RNU6-641P-201ENST00000384006 107 ntBASIC2.77□□□□□ -1.97
CLK1P49759 Y_RNA.509-201ENST00000384506 99 ntBASIC2.77□□□□□ -1.97
CLK1P49759 MIR147B-201ENST00000390185 80 ntBASIC2.77□□□□□ -1.97
CLK1P49759 RNU6-903P-201ENST00000391270 109 ntBASIC2.77□□□□□ -1.97
CLK1P49759 RNU6-373P-201ENST00000411247 98 ntBASIC2.77□□□□□ -1.97
CLK1P49759 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.77□□□□□ -1.97
CLK1P49759 CYCSP48-201ENST00000417124 323 ntBASIC2.77□□□□□ -1.97
CLK1P49759 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 151.7 ms