Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 RPS15AP6-201ENST00000420703 385 ntBASIC3.44□□□□□ -1.86
TM4SF4P48230 AL365496.1-201ENST00000426885 215 ntBASIC3.44□□□□□ -1.86
TM4SF4P48230 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.44□□□□□ -1.86
TM4SF4P48230 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.44□□□□□ -1.86
TM4SF4P48230 HIGD1AP2-201ENST00000446367 280 ntBASIC3.44□□□□□ -1.86
TM4SF4P48230 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.44□□□□□ -1.86
TM4SF4P48230 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.44□□□□□ -1.86
TM4SF4P48230 AC092001.1-201ENST00000453012 261 ntBASIC3.44□□□□□ -1.86
TM4SF4P48230 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.44□□□□□ -1.86
TM4SF4P48230 snoU13.26-201ENST00000459452 105 ntBASIC3.44□□□□□ -1.86
TM4SF4P48230 RNU6-1208P-201ENST00000459588 107 ntBASIC3.44□□□□□ -1.86
TM4SF4P48230 AC107626.1-201ENST00000471084 183 ntBASIC3.44□□□□□ -1.86
TM4SF4P48230 AC021205.2-201ENST00000480069 347 ntBASIC3.44□□□□□ -1.86
TM4SF4P48230 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.44□□□□□ -1.86
TM4SF4P48230 CCDC34P1-201ENST00000507441 517 ntBASIC3.44□□□□□ -1.86
TM4SF4P48230 AF213884.2-201ENST00000510417 903 ntBASIC3.44□□□□□ -1.86
TM4SF4P48230 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.44□□□□□ -1.86
TM4SF4P48230 OR11H5P-201ENST00000554039 926 ntBASIC3.44□□□□□ -1.86
TM4SF4P48230 MTCO3P23-201ENST00000561363 289 ntBASIC3.44□□□□□ -1.86
TM4SF4P48230 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.44□□□□□ -1.86
TM4SF4P48230 AC007151.1-201ENST00000572774 483 ntBASIC3.44□□□□□ -1.86
TM4SF4P48230 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
TM4SF4P48230 RPL23AP78-201ENST00000599928 470 ntBASIC3.44□□□□□ -1.86
TM4SF4P48230 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.44□□□□□ -1.86
TM4SF4P48230 UCA1.1-201ENST00000620952 75 ntBASIC3.44□□□□□ -1.86
TM4SF4P48230 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.44□□□□□ -1.86
TM4SF4P48230 MAPK10-322ENST00000641485 4530 ntBASIC3.44□□□□□ -1.86
TM4SF4P48230 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TM4SF4P48230 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
TM4SF4P48230 AP003122.5-201ENST00000527668 3766 ntBASIC3.43□□□□□ -1.86
TM4SF4P48230 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TM4SF4P48230 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
TM4SF4P48230 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TM4SF4P48230 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
TM4SF4P48230 RNU6-266P-201ENST00000364225 107 ntBASIC3.43□□□□□ -1.86
TM4SF4P48230 RNU6-19P-201ENST00000384718 107 ntBASIC3.43□□□□□ -1.86
TM4SF4P48230 MIR147B-201ENST00000390185 80 ntBASIC3.43□□□□□ -1.86
TM4SF4P48230 RNU6-750P-201ENST00000390946 107 ntBASIC3.43□□□□□ -1.86
TM4SF4P48230 AC023141.4-201ENST00000412031 328 ntBASIC3.43□□□□□ -1.86
TM4SF4P48230 AL358075.3-201ENST00000426289 226 ntBASIC3.43□□□□□ -1.86
TM4SF4P48230 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.43□□□□□ -1.86
TM4SF4P48230 MTND1P2-201ENST00000430604 821 ntBASIC3.43□□□□□ -1.86
TM4SF4P48230 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.43□□□□□ -1.86
TM4SF4P48230 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.43□□□□□ -1.86
TM4SF4P48230 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.43□□□□□ -1.86
TM4SF4P48230 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.43□□□□□ -1.86
TM4SF4P48230 SNORA19.2-201ENST00000516013 114 ntBASIC3.43□□□□□ -1.86
TM4SF4P48230 RNU1-86P-201ENST00000516108 154 ntBASIC3.43□□□□□ -1.86
TM4SF4P48230 RNU1-107P-201ENST00000516617 154 ntBASIC3.43□□□□□ -1.86
TM4SF4P48230 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.43□□□□□ -1.86
TM4SF4P48230 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.43□□□□□ -1.86
TM4SF4P48230 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.43□□□□□ -1.86
TM4SF4P48230 AC093913.1-201ENST00000614178 329 ntBASIC3.43□□□□□ -1.86
TM4SF4P48230 AC103858.2-201ENST00000621471 543 ntBASIC3.43□□□□□ -1.86
TM4SF4P48230 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TM4SF4P48230 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.43□□□□□ -1.86
TM4SF4P48230 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
TM4SF4P48230 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.43□□□□□ -1.86
TM4SF4P48230 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
TM4SF4P48230 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TM4SF4P48230 CDC27P3-201ENST00000635418 1910 ntBASIC3.42□□□□□ -1.86
TM4SF4P48230 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
TM4SF4P48230 AC018555.1-201ENST00000567548 1980 ntBASIC3.42□□□□□ -1.86
TM4SF4P48230 AC073325.2-201ENST00000339545 159 ntBASIC3.42□□□□□ -1.86
TM4SF4P48230 RNU6-858P-201ENST00000362436 107 ntBASIC3.42□□□□□ -1.86
TM4SF4P48230 Y_RNA.100-201ENST00000363141 102 ntBASIC3.42□□□□□ -1.86
TM4SF4P48230 RNU6-1303P-201ENST00000364841 107 ntBASIC3.42□□□□□ -1.86
TM4SF4P48230 Y_RNA.373-201ENST00000365600 103 ntBASIC3.42□□□□□ -1.86
TM4SF4P48230 Y_RNA.378-201ENST00000365652 113 ntBASIC3.42□□□□□ -1.86
TM4SF4P48230 RNU6-72P-201ENST00000384285 79 ntBASIC3.42□□□□□ -1.86
TM4SF4P48230 SNORA67.4-201ENST00000384688 142 ntBASIC3.42□□□□□ -1.86
TM4SF4P48230 RNU6-1106P-201ENST00000390845 107 ntBASIC3.42□□□□□ -1.86
TM4SF4P48230 EIF4E2P1-201ENST00000393781 255 ntBASIC3.42□□□□□ -1.86
TM4SF4P48230 PTGES3P4-201ENST00000426243 356 ntBASIC3.42□□□□□ -1.86
TM4SF4P48230 snoU109.2-201ENST00000459316 135 ntBASIC3.42□□□□□ -1.86
TM4SF4P48230 AC007547.1-201ENST00000462177 490 ntBASIC3.42□□□□□ -1.86
TM4SF4P48230 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.42□□□□□ -1.86
TM4SF4P48230 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.42□□□□□ -1.86
TM4SF4P48230 TBCAP3-201ENST00000512475 312 ntBASIC3.42□□□□□ -1.86
TM4SF4P48230 MIR2276-201ENST00000516886 89 ntBASIC3.42□□□□□ -1.86
TM4SF4P48230 AC090115.3-201ENST00000553218 849 ntBASIC3.42□□□□□ -1.86
TM4SF4P48230 AL133241.1-201ENST00000556832 487 ntBASIC3.42□□□□□ -1.86
TM4SF4P48230 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.42□□□□□ -1.86
TM4SF4P48230 AC024153.1-201ENST00000603103 365 ntBASIC3.42□□□□□ -1.86
TM4SF4P48230 AC002044.1-201ENST00000606707 158 ntBASIC3.42□□□□□ -1.86
TM4SF4P48230 RMST_3.1-201ENST00000611651 109 ntBASIC3.42□□□□□ -1.86
TM4SF4P48230 AC103705.1-201ENST00000619013 241 ntBASIC3.42□□□□□ -1.86
TM4SF4P48230 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
TM4SF4P48230 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TM4SF4P48230 AC010889.1-201ENST00000566193 2666 ntBASIC3.42□□□□□ -1.86
TM4SF4P48230 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
TM4SF4P48230 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
TM4SF4P48230 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
TM4SF4P48230 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.41□□□□□ -1.86
TM4SF4P48230 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
TM4SF4P48230 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
TM4SF4P48230 RNU5E-7P-201ENST00000365290 117 ntBASIC3.41□□□□□ -1.86
TM4SF4P48230 Z98749.2-208ENST00000381646 500 ntBASIC3.41□□□□□ -1.86
TM4SF4P48230 RNA5SP293-201ENST00000410527 113 ntBASIC3.41□□□□□ -1.86
TM4SF4P48230 RNA5SP31-201ENST00000411144 127 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms