Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 RNU6-1303P-201ENST00000364841 107 ntBASIC2.42□□□□□ -2.02
CDX1P47902 RNU1-140P-201ENST00000365040 165 ntBASIC2.42□□□□□ -2.02
CDX1P47902 RNU5E-7P-201ENST00000365290 117 ntBASIC2.42□□□□□ -2.02
CDX1P47902 RNU6-220P-201ENST00000390919 107 ntBASIC2.42□□□□□ -2.02
CDX1P47902 SNORA48.2-201ENST00000390926 124 ntBASIC2.42□□□□□ -2.02
CDX1P47902 MORF4L1P6-201ENST00000418771 268 ntBASIC2.42□□□□□ -2.02
CDX1P47902 RPL30P4-201ENST00000429309 333 ntBASIC2.42□□□□□ -2.02
CDX1P47902 RPS29P6-201ENST00000438196 145 ntBASIC2.42□□□□□ -2.02
CDX1P47902 RPL7P12-201ENST00000446719 750 ntBASIC2.42□□□□□ -2.02
CDX1P47902 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.42□□□□□ -2.02
CDX1P47902 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.42□□□□□ -2.02
CDX1P47902 CACYBPP2-201ENST00000453625 678 ntBASIC2.42□□□□□ -2.02
CDX1P47902 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.42□□□□□ -2.02
CDX1P47902 RPL37P25-201ENST00000507308 276 ntBASIC2.42□□□□□ -2.02
CDX1P47902 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.42□□□□□ -2.02
CDX1P47902 RNU2-69P-201ENST00000516061 100 ntBASIC2.42□□□□□ -2.02
CDX1P47902 RNA5SP341-201ENST00000516261 117 ntBASIC2.42□□□□□ -2.02
CDX1P47902 SNORA43.2-201ENST00000516652 128 ntBASIC2.42□□□□□ -2.02
CDX1P47902 MTND4P7-201ENST00000523876 130 ntBASIC2.42□□□□□ -2.02
CDX1P47902 AP001893.2-201ENST00000526949 202 ntBASIC2.42□□□□□ -2.02
CDX1P47902 AC104383.1-201ENST00000530297 370 ntBASIC2.42□□□□□ -2.02
CDX1P47902 AC107016.2-201ENST00000547968 190 ntBASIC2.42□□□□□ -2.02
CDX1P47902 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.42□□□□□ -2.02
CDX1P47902 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.42□□□□□ -2.02
CDX1P47902 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.42□□□□□ -2.02
CDX1P47902 UBL5P2-201ENST00000583788 219 ntBASIC2.42□□□□□ -2.02
CDX1P47902 AL356575.1-201ENST00000603008 283 ntBASIC2.42□□□□□ -2.02
CDX1P47902 AC024153.1-201ENST00000603103 365 ntBASIC2.42□□□□□ -2.02
CDX1P47902 AP001330.5-201ENST00000607176 411 ntBASIC2.42□□□□□ -2.02
CDX1P47902 AC135507.2-201ENST00000612443 309 ntBASIC2.42□□□□□ -2.02
CDX1P47902 AC015540.1-201ENST00000615828 501 ntBASIC2.42□□□□□ -2.02
CDX1P47902 RBBP8P1-201ENST00000449447 1844 ntBASIC2.42□□□□□ -2.02
CDX1P47902 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CDX1P47902 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.41□□□□□ -2.02
CDX1P47902 MAPK10-266ENST00000641066 6555 ntBASIC2.41□□□□□ -2.02
CDX1P47902 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CDX1P47902 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.41□□□□□ -2.02
CDX1P47902 OR56A5-201ENST00000340110 738 ntBASIC2.41□□□□□ -2.02
CDX1P47902 SNORD114-19-201ENST00000363072 75 ntBASIC2.41□□□□□ -2.02
CDX1P47902 SNORA71.1-201ENST00000364523 117 ntBASIC2.41□□□□□ -2.02
CDX1P47902 Y_RNA.480-201ENST00000384364 102 ntBASIC2.41□□□□□ -2.02
CDX1P47902 RNU6-843P-201ENST00000384454 104 ntBASIC2.41□□□□□ -2.02
CDX1P47902 SNORA16.2-201ENST00000390991 127 ntBASIC2.41□□□□□ -2.02
CDX1P47902 RPL17P50-201ENST00000396131 546 ntBASIC2.41□□□□□ -2.02
CDX1P47902 BTF3P7-201ENST00000407097 488 ntBASIC2.41□□□□□ -2.02
CDX1P47902 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.41□□□□□ -2.02
CDX1P47902 UBE2V1P10-201ENST00000414685 269 ntBASIC2.41□□□□□ -2.02
CDX1P47902 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.41□□□□□ -2.02
CDX1P47902 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.41□□□□□ -2.02
CDX1P47902 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.41□□□□□ -2.02
CDX1P47902 DNAJC19P4-201ENST00000440115 345 ntBASIC2.41□□□□□ -2.02
CDX1P47902 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.41□□□□□ -2.02
CDX1P47902 AC016691.1-201ENST00000441321 413 ntBASIC2.41□□□□□ -2.02
CDX1P47902 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.41□□□□□ -2.02
CDX1P47902 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.41□□□□□ -2.02
CDX1P47902 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.41□□□□□ -2.02
CDX1P47902 AC079140.5-201ENST00000507882 310 ntBASIC2.41□□□□□ -2.02
CDX1P47902 AC091826.1-201ENST00000514065 313 ntBASIC2.41□□□□□ -2.02
CDX1P47902 SMURF2P1-201ENST00000514992 481 ntBASIC2.41□□□□□ -2.02
CDX1P47902 AC010186.2-204ENST00000537668 439 ntBASIC2.41□□□□□ -2.02
CDX1P47902 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.41□□□□□ -2.02
CDX1P47902 RPS15AP11-201ENST00000594193 385 ntBASIC2.41□□□□□ -2.02
CDX1P47902 AC021646.1-201ENST00000605469 484 ntBASIC2.41□□□□□ -2.02
CDX1P47902 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.41□□□□□ -2.02
CDX1P47902 U2.17-201ENST00000611454 95 ntBASIC2.41□□□□□ -2.02
CDX1P47902 uc_338.34-201ENST00000617467 174 ntBASIC2.41□□□□□ -2.02
CDX1P47902 AC068792.1-201ENST00000621354 417 ntBASIC2.41□□□□□ -2.02
CDX1P47902 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CDX1P47902 AL354685.2-201ENST00000448218 1447 ntBASIC2.41□□□□□ -2.02
CDX1P47902 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
CDX1P47902 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
CDX1P47902 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
CDX1P47902 RNU6-37P-201ENST00000362692 107 ntBASIC2.4□□□□□ -2.03
CDX1P47902 RNU6-11P-201ENST00000364234 107 ntBASIC2.4□□□□□ -2.03
CDX1P47902 RNU6-7-201ENST00000364784 107 ntBASIC2.4□□□□□ -2.03
CDX1P47902 RNU6-8-201ENST00000365467 107 ntBASIC2.4□□□□□ -2.03
CDX1P47902 RNU6-25P-201ENST00000383873 107 ntBASIC2.4□□□□□ -2.03
CDX1P47902 RNU6-1-201ENST00000383898 107 ntBASIC2.4□□□□□ -2.03
CDX1P47902 RNU6-48P-201ENST00000384161 107 ntBASIC2.4□□□□□ -2.03
CDX1P47902 RNU6-36P-201ENST00000384172 107 ntBASIC2.4□□□□□ -2.03
CDX1P47902 RNU6-4P-201ENST00000384205 107 ntBASIC2.4□□□□□ -2.03
CDX1P47902 RNU6-5P-201ENST00000384238 107 ntBASIC2.4□□□□□ -2.03
CDX1P47902 RNU6-3P-201ENST00000384314 107 ntBASIC2.4□□□□□ -2.03
CDX1P47902 RNU6-16P-201ENST00000384385 107 ntBASIC2.4□□□□□ -2.03
CDX1P47902 RNU6-15P-201ENST00000384534 107 ntBASIC2.4□□□□□ -2.03
CDX1P47902 RNU6-2-201ENST00000384627 107 ntBASIC2.4□□□□□ -2.03
CDX1P47902 RNU6-29P-201ENST00000384637 107 ntBASIC2.4□□□□□ -2.03
CDX1P47902 RNU6-9-201ENST00000384776 107 ntBASIC2.4□□□□□ -2.03
CDX1P47902 RNU6-33P-201ENST00000384793 107 ntBASIC2.4□□□□□ -2.03
CDX1P47902 MIR128-1-201ENST00000384921 82 ntBASIC2.4□□□□□ -2.03
CDX1P47902 NDUFB4P4-201ENST00000404822 243 ntBASIC2.4□□□□□ -2.03
CDX1P47902 U6atac.2-201ENST00000408644 118 ntBASIC2.4□□□□□ -2.03
CDX1P47902 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.4□□□□□ -2.03
CDX1P47902 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.4□□□□□ -2.03
CDX1P47902 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.4□□□□□ -2.03
CDX1P47902 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.4□□□□□ -2.03
CDX1P47902 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.4□□□□□ -2.03
CDX1P47902 TIMM9P3-201ENST00000428659 274 ntBASIC2.4□□□□□ -2.03
CDX1P47902 VN1R108P-201ENST00000431580 830 ntBASIC2.4□□□□□ -2.03
CDX1P47902 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms