Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.02□□□□□ -2.09
SSR1P43307 AC092953.2-201ENST00000608000 699 ntBASIC2.02□□□□□ -2.09
SSR1P43307 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.01□□□□□ -2.09
SSR1P43307 Y_RNA.33-201ENST00000362591 102 ntBASIC2.01□□□□□ -2.09
SSR1P43307 U8.2-201ENST00000363156 134 ntBASIC2.01□□□□□ -2.09
SSR1P43307 AC019129.1-201ENST00000403786 261 ntBASIC2.01□□□□□ -2.09
SSR1P43307 AL591704.1-201ENST00000432574 275 ntBASIC2.01□□□□□ -2.09
SSR1P43307 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.01□□□□□ -2.09
SSR1P43307 RPL7P43-201ENST00000478876 753 ntBASIC2.01□□□□□ -2.09
SSR1P43307 RPL22P13-201ENST00000493291 347 ntBASIC2.01□□□□□ -2.09
SSR1P43307 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.01□□□□□ -2.09
SSR1P43307 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.01□□□□□ -2.09
SSR1P43307 RNU6-415P-201ENST00000516252 97 ntBASIC2.01□□□□□ -2.09
SSR1P43307 SCARNA1-201ENST00000517138 166 ntBASIC2.01□□□□□ -2.09
SSR1P43307 AC107953.1-201ENST00000522216 297 ntBASIC2.01□□□□□ -2.09
SSR1P43307 AC079598.5-201ENST00000547460 117 ntBASIC2.01□□□□□ -2.09
SSR1P43307 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SSR1P43307 MIR1273C-201ENST00000578669 77 ntBASIC2.01□□□□□ -2.09
SSR1P43307 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.01□□□□□ -2.09
SSR1P43307 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.01□□□□□ -2.09
SSR1P43307 AC024933.1-201ENST00000608472 348 ntBASIC2.01□□□□□ -2.09
SSR1P43307 AC093788.1-201ENST00000609356 927 ntBASIC2.01□□□□□ -2.09
SSR1P43307 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.01□□□□□ -2.09
SSR1P43307 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.01□□□□□ -2.09
SSR1P43307 AC110994.2-201ENST00000635481 492 ntBASIC2.01□□□□□ -2.09
SSR1P43307 RBBP8P1-201ENST00000449447 1844 ntBASIC2.01□□□□□ -2.09
SSR1P43307 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2□□□□□ -2.09
SSR1P43307 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
SSR1P43307 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2□□□□□ -2.09
SSR1P43307 SNORD56.2-201ENST00000363242 71 ntBASIC2□□□□□ -2.09
SSR1P43307 RNU4-1-201ENST00000363925 141 ntBASIC2□□□□□ -2.09
SSR1P43307 U3.13-201ENST00000364804 214 ntBASIC2□□□□□ -2.09
SSR1P43307 OR9R1P-201ENST00000412200 877 ntBASIC2□□□□□ -2.09
SSR1P43307 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2□□□□□ -2.09
SSR1P43307 AC008267.5-201ENST00000424928 265 ntBASIC2□□□□□ -2.09
SSR1P43307 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2□□□□□ -2.09
SSR1P43307 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2□□□□□ -2.09
SSR1P43307 AC018868.1-201ENST00000491307 315 ntBASIC2□□□□□ -2.09
SSR1P43307 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2□□□□□ -2.09
SSR1P43307 AC010587.1-201ENST00000505809 469 ntBASIC2□□□□□ -2.09
SSR1P43307 RNU6-970P-201ENST00000516312 107 ntBASIC2□□□□□ -2.09
SSR1P43307 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2□□□□□ -2.09
SSR1P43307 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2□□□□□ -2.09
SSR1P43307 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2□□□□□ -2.09
SSR1P43307 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2□□□□□ -2.09
SSR1P43307 AC010928.2-201ENST00000588017 287 ntBASIC2□□□□□ -2.09
SSR1P43307 AL078605.1-201ENST00000603529 500 ntBASIC2□□□□□ -2.09
SSR1P43307 AL050303.3-201ENST00000613704 284 ntBASIC2□□□□□ -2.09
SSR1P43307 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2□□□□□ -2.09
SSR1P43307 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2□□□□□ -2.09
SSR1P43307 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SSR1P43307 CISD1P1-201ENST00000393907 327 ntBASIC1.99□□□□□ -2.09
SSR1P43307 RNU2-63P-201ENST00000410792 194 ntBASIC1.99□□□□□ -2.09
SSR1P43307 AC009518.2-201ENST00000418056 731 ntBASIC1.99□□□□□ -2.09
SSR1P43307 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SSR1P43307 TRBV12-1-201ENST00000479785 344 ntBASIC1.99□□□□□ -2.09
SSR1P43307 AC096745.1-201ENST00000509945 370 ntBASIC1.99□□□□□ -2.09
SSR1P43307 AC112206.3-201ENST00000514578 389 ntBASIC1.99□□□□□ -2.09
SSR1P43307 RNU6-123P-201ENST00000516163 102 ntBASIC1.99□□□□□ -2.09
SSR1P43307 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.99□□□□□ -2.09
SSR1P43307 HMGN1P30-201ENST00000589286 268 ntBASIC1.99□□□□□ -2.09
SSR1P43307 SEPT7P9-203ENST00000604116 343 ntBASIC1.99□□□□□ -2.09
SSR1P43307 AP000240.1-201ENST00000609910 452 ntBASIC1.99□□□□□ -2.09
SSR1P43307 MIR5739-201ENST00000619803 80 ntBASIC1.99□□□□□ -2.09
SSR1P43307 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SSR1P43307 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SSR1P43307 RNU5E-1-201ENST00000362477 120 ntBASIC1.98□□□□□ -2.09
SSR1P43307 RNY4P24-201ENST00000362735 96 ntBASIC1.98□□□□□ -2.09
SSR1P43307 U8.3-201ENST00000363321 132 ntBASIC1.98□□□□□ -2.09
SSR1P43307 RNU6-501P-201ENST00000364072 100 ntBASIC1.98□□□□□ -2.09
SSR1P43307 RNU2-2P-201ENST00000410396 191 ntBASIC1.98□□□□□ -2.09
SSR1P43307 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC1.98□□□□□ -2.09
SSR1P43307 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.98□□□□□ -2.09
SSR1P43307 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.98□□□□□ -2.09
SSR1P43307 AL589872.1-201ENST00000426602 288 ntBASIC1.98□□□□□ -2.09
SSR1P43307 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.98□□□□□ -2.09
SSR1P43307 AL161788.1-201ENST00000441805 169 ntBASIC1.98□□□□□ -2.09
SSR1P43307 AC009238.1-201ENST00000442165 424 ntBASIC1.98□□□□□ -2.09
SSR1P43307 AL606517.1-201ENST00000446914 387 ntBASIC1.98□□□□□ -2.09
SSR1P43307 AC009237.6-201ENST00000446969 424 ntBASIC1.98□□□□□ -2.09
SSR1P43307 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SSR1P43307 AL441985.1-201ENST00000457727 251 ntBASIC1.98□□□□□ -2.09
SSR1P43307 AP000797.1-201ENST00000478870 387 ntBASIC1.98□□□□□ -2.09
SSR1P43307 AC027575.1-201ENST00000481064 460 ntBASIC1.98□□□□□ -2.09
SSR1P43307 RBBP4P6-201ENST00000508098 202 ntBASIC1.98□□□□□ -2.09
SSR1P43307 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.98□□□□□ -2.09
SSR1P43307 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.98□□□□□ -2.09
SSR1P43307 RNU2-10P-201ENST00000516375 211 ntBASIC1.98□□□□□ -2.09
SSR1P43307 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.98□□□□□ -2.09
SSR1P43307 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.98□□□□□ -2.09
SSR1P43307 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.98□□□□□ -2.09
SSR1P43307 AP003461.1-201ENST00000528866 78 ntBASIC1.98□□□□□ -2.09
SSR1P43307 AC091544.4-201ENST00000555268 342 ntBASIC1.98□□□□□ -2.09
SSR1P43307 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.98□□□□□ -2.09
SSR1P43307 AP002360.4-201ENST00000606980 481 ntBASIC1.98□□□□□ -2.09
SSR1P43307 U2.15-201ENST00000611544 191 ntBASIC1.98□□□□□ -2.09
SSR1P43307 U2.16-201ENST00000613119 191 ntBASIC1.98□□□□□ -2.09
SSR1P43307 U2.12-201ENST00000613778 191 ntBASIC1.98□□□□□ -2.09
SSR1P43307 U2.20-201ENST00000613956 192 ntBASIC1.98□□□□□ -2.09
SSR1P43307 U2.9-201ENST00000615427 191 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms