Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC3.91□□□□□ -1.78
LTBRP36941 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
LTBRP36941 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.91□□□□□ -1.78
LTBRP36941 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
LTBRP36941 RNU1-108P-201ENST00000362556 161 ntBASIC3.91□□□□□ -1.78
LTBRP36941 Y_RNA.123-201ENST00000363338 102 ntBASIC3.91□□□□□ -1.78
LTBRP36941 Z98749.2-208ENST00000381646 500 ntBASIC3.91□□□□□ -1.78
LTBRP36941 SNORA51.11-201ENST00000384442 131 ntBASIC3.91□□□□□ -1.78
LTBRP36941 Y_RNA.526-201ENST00000384572 110 ntBASIC3.91□□□□□ -1.78
LTBRP36941 RNU6-1222P-201ENST00000384615 107 ntBASIC3.91□□□□□ -1.78
LTBRP36941 MIR628-201ENST00000385229 95 ntBASIC3.91□□□□□ -1.78
LTBRP36941 MT-TG-201ENST00000387429 68 ntBASIC3.91□□□□□ -1.78
LTBRP36941 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
LTBRP36941 SNORA48.5-201ENST00000391143 135 ntBASIC3.91□□□□□ -1.78
LTBRP36941 SAR1AP2-201ENST00000392696 594 ntBASIC3.91□□□□□ -1.78
LTBRP36941 RNA5SP239-201ENST00000410218 129 ntBASIC3.91□□□□□ -1.78
LTBRP36941 RNA5SP494-201ENST00000410653 129 ntBASIC3.91□□□□□ -1.78
LTBRP36941 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.91□□□□□ -1.78
LTBRP36941 YPEL5P1-201ENST00000419731 367 ntBASIC3.91□□□□□ -1.78
LTBRP36941 HMGN2P30-201ENST00000423237 256 ntBASIC3.91□□□□□ -1.78
LTBRP36941 RPS6P12-201ENST00000432491 726 ntBASIC3.91□□□□□ -1.78
LTBRP36941 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.91□□□□□ -1.78
LTBRP36941 MTATP6P7-201ENST00000453315 681 ntBASIC3.91□□□□□ -1.78
LTBRP36941 AC079354.2-201ENST00000453523 154 ntBASIC3.91□□□□□ -1.78
LTBRP36941 RPL30P10-201ENST00000488148 337 ntBASIC3.91□□□□□ -1.78
LTBRP36941 SNORA31.18-201ENST00000517043 134 ntBASIC3.91□□□□□ -1.78
LTBRP36941 RNU6-1271P-201ENST00000517049 105 ntBASIC3.91□□□□□ -1.78
LTBRP36941 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.91□□□□□ -1.78
LTBRP36941 AMZ2P1-203ENST00000565833 850 ntBASIC3.91□□□□□ -1.78
LTBRP36941 MYL12BP1-201ENST00000569826 507 ntBASIC3.91□□□□□ -1.78
LTBRP36941 U2.21-201ENST00000637295 81 ntBASIC3.91□□□□□ -1.78
LTBRP36941 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC3.91□□□□□ -1.78
LTBRP36941 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
LTBRP36941 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC3.91□□□□□ -1.78
LTBRP36941 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
LTBRP36941 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC3.91□□□□□ -1.78
LTBRP36941 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
LTBRP36941 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
LTBRP36941 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
LTBRP36941 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
LTBRP36941 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.9□□□□□ -1.78
LTBRP36941 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.9□□□□□ -1.78
LTBRP36941 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.78
LTBRP36941 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
LTBRP36941 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
LTBRP36941 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
LTBRP36941 RNU6-778P-201ENST00000363269 103 ntBASIC3.9□□□□□ -1.79
LTBRP36941 RNU6-884P-201ENST00000363889 107 ntBASIC3.9□□□□□ -1.79
LTBRP36941 SNORA38.1-201ENST00000364172 131 ntBASIC3.9□□□□□ -1.79
LTBRP36941 RNU6-1318P-201ENST00000365389 103 ntBASIC3.9□□□□□ -1.79
LTBRP36941 RNU6-898P-201ENST00000365627 104 ntBASIC3.9□□□□□ -1.79
LTBRP36941 RNU1-73P-201ENST00000383971 164 ntBASIC3.9□□□□□ -1.79
LTBRP36941 Y_RNA.510-201ENST00000384511 114 ntBASIC3.9□□□□□ -1.79
LTBRP36941 SNORA69.1-201ENST00000390904 137 ntBASIC3.9□□□□□ -1.79
LTBRP36941 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.9□□□□□ -1.79
LTBRP36941 AC017083.1-201ENST00000428093 483 ntBASIC3.9□□□□□ -1.79
LTBRP36941 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.9□□□□□ -1.79
LTBRP36941 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.9□□□□□ -1.79
LTBRP36941 DYNLT3P2-201ENST00000442517 295 ntBASIC3.9□□□□□ -1.79
LTBRP36941 RPL37P4-201ENST00000448908 268 ntBASIC3.9□□□□□ -1.79
LTBRP36941 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.9□□□□□ -1.79
LTBRP36941 AC006026.2-201ENST00000457376 180 ntBASIC3.9□□□□□ -1.79
LTBRP36941 RPL21P104-201ENST00000464143 478 ntBASIC3.9□□□□□ -1.79
LTBRP36941 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
LTBRP36941 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.9□□□□□ -1.79
LTBRP36941 AC010265.1-201ENST00000513509 211 ntBASIC3.9□□□□□ -1.79
LTBRP36941 RNU2-27P-201ENST00000516185 142 ntBASIC3.9□□□□□ -1.79
LTBRP36941 SNORA43.2-201ENST00000516652 128 ntBASIC3.9□□□□□ -1.79
LTBRP36941 AP004607.1-201ENST00000524456 203 ntBASIC3.9□□□□□ -1.79
LTBRP36941 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.9□□□□□ -1.79
LTBRP36941 AL590705.4-201ENST00000532209 134 ntBASIC3.9□□□□□ -1.79
LTBRP36941 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.9□□□□□ -1.79
LTBRP36941 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.9□□□□□ -1.79
LTBRP36941 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.9□□□□□ -1.79
LTBRP36941 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.9□□□□□ -1.79
LTBRP36941 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.9□□□□□ -1.79
LTBRP36941 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
LTBRP36941 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
LTBRP36941 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
LTBRP36941 AC022336.2-201ENST00000568966 2538 ntBASIC3.9□□□□□ -1.79
LTBRP36941 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
LTBRP36941 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
LTBRP36941 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
LTBRP36941 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.89□□□□□ -1.79
LTBRP36941 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LTBRP36941 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
LTBRP36941 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
LTBRP36941 RNU6-527P-201ENST00000363425 104 ntBASIC3.89□□□□□ -1.79
LTBRP36941 RNU6-105P-201ENST00000363909 104 ntBASIC3.89□□□□□ -1.79
LTBRP36941 RNU6-784P-201ENST00000384330 106 ntBASIC3.89□□□□□ -1.79
LTBRP36941 Y_RNA.551-201ENST00000384661 102 ntBASIC3.89□□□□□ -1.79
LTBRP36941 RNU6-713P-201ENST00000384761 107 ntBASIC3.89□□□□□ -1.79
LTBRP36941 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LTBRP36941 RPL26P27-201ENST00000414397 437 ntBASIC3.89□□□□□ -1.79
LTBRP36941 MTCO3P19-201ENST00000415864 321 ntBASIC3.89□□□□□ -1.79
LTBRP36941 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.89□□□□□ -1.79
LTBRP36941 SNORA71B-202ENST00000439232 272 ntBASIC3.89□□□□□ -1.79
LTBRP36941 AC124916.1-201ENST00000444020 547 ntBASIC3.89□□□□□ -1.79
LTBRP36941 AC073910.1-201ENST00000445047 438 ntBASIC3.89□□□□□ -1.79
LTBRP36941 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms