Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.23□□□□□ -2.05
RFC4P35249 AL355598.1-201ENST00000604169 202 ntBASIC2.23□□□□□ -2.05
RFC4P35249 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.23□□□□□ -2.05
RFC4P35249 AC121334.2-201ENST00000605387 271 ntBASIC2.23□□□□□ -2.05
RFC4P35249 AC068276.1-201ENST00000605793 379 ntBASIC2.23□□□□□ -2.05
RFC4P35249 BX248123.2-201ENST00000606318 124 ntBASIC2.23□□□□□ -2.05
RFC4P35249 AC034229.4-201ENST00000607861 441 ntBASIC2.23□□□□□ -2.05
RFC4P35249 AC087683.2-201ENST00000611384 326 ntBASIC2.23□□□□□ -2.05
RFC4P35249 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.23□□□□□ -2.05
RFC4P35249 AC104010.1-201ENST00000616889 150 ntBASIC2.23□□□□□ -2.05
RFC4P35249 U4atac.1-201ENST00000618345 95 ntBASIC2.23□□□□□ -2.05
RFC4P35249 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2.23□□□□□ -2.05
RFC4P35249 AC006927.3-201ENST00000638789 384 ntBASIC2.23□□□□□ -2.05
RFC4P35249 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
RFC4P35249 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
RFC4P35249 RNU5F-7P-201ENST00000363696 115 ntBASIC2.22□□□□□ -2.05
RFC4P35249 Y_RNA.560-201ENST00000384689 102 ntBASIC2.22□□□□□ -2.05
RFC4P35249 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
RFC4P35249 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.22□□□□□ -2.05
RFC4P35249 RNU2-62P-201ENST00000410868 191 ntBASIC2.22□□□□□ -2.05
RFC4P35249 ZNF90P2-204ENST00000419323 1075 ntBASIC2.22□□□□□ -2.05
RFC4P35249 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.22□□□□□ -2.05
RFC4P35249 RAC1P6-201ENST00000423911 575 ntBASIC2.22□□□□□ -2.05
RFC4P35249 ISCA1P1-201ENST00000426679 387 ntBASIC2.22□□□□□ -2.05
RFC4P35249 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.22□□□□□ -2.05
RFC4P35249 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
RFC4P35249 AL590365.1-201ENST00000450788 243 ntBASIC2.22□□□□□ -2.05
RFC4P35249 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.22□□□□□ -2.05
RFC4P35249 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.22□□□□□ -2.05
RFC4P35249 AP003181.2-201ENST00000528941 181 ntBASIC2.22□□□□□ -2.05
RFC4P35249 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.22□□□□□ -2.05
RFC4P35249 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.22□□□□□ -2.05
RFC4P35249 MIR5697-201ENST00000578045 78 ntBASIC2.22□□□□□ -2.05
RFC4P35249 AC005261.5-201ENST00000596280 355 ntBASIC2.22□□□□□ -2.05
RFC4P35249 AL355816.2-201ENST00000610049 647 ntBASIC2.22□□□□□ -2.05
RFC4P35249 uc_338.12-201ENST00000616344 181 ntBASIC2.22□□□□□ -2.05
RFC4P35249 AC079416.3-201ENST00000624479 549 ntBASIC2.22□□□□□ -2.05
RFC4P35249 AC092104.1-201ENST00000497346 1441 ntBASIC2.22□□□□□ -2.05
RFC4P35249 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
RFC4P35249 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
RFC4P35249 SMIM11P1-201ENST00000369586 178 ntBASIC2.21□□□□□ -2.06
RFC4P35249 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
RFC4P35249 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
RFC4P35249 RNU1-57P-201ENST00000384491 166 ntBASIC2.21□□□□□ -2.06
RFC4P35249 RNU6-658P-201ENST00000384606 106 ntBASIC2.21□□□□□ -2.06
RFC4P35249 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
RFC4P35249 FCF1P10-201ENST00000407590 479 ntBASIC2.21□□□□□ -2.06
RFC4P35249 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.21□□□□□ -2.06
RFC4P35249 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.21□□□□□ -2.06
RFC4P35249 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.21□□□□□ -2.06
RFC4P35249 AC245517.4-201ENST00000448601 281 ntBASIC2.21□□□□□ -2.06
RFC4P35249 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
RFC4P35249 RPL22P13-201ENST00000493291 347 ntBASIC2.21□□□□□ -2.06
RFC4P35249 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.21□□□□□ -2.06
RFC4P35249 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.21□□□□□ -2.06
RFC4P35249 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.21□□□□□ -2.06
RFC4P35249 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.21□□□□□ -2.06
RFC4P35249 AC002400.1-201ENST00000569310 726 ntBASIC2.21□□□□□ -2.06
RFC4P35249 MIR3126-201ENST00000577443 74 ntBASIC2.21□□□□□ -2.06
RFC4P35249 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.21□□□□□ -2.06
RFC4P35249 AL358072.1-201ENST00000604156 575 ntBASIC2.21□□□□□ -2.06
RFC4P35249 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.21□□□□□ -2.06
RFC4P35249 AC004223.4-201ENST00000612426 332 ntBASIC2.21□□□□□ -2.06
RFC4P35249 DUSP12P1-201ENST00000612874 516 ntBASIC2.21□□□□□ -2.06
RFC4P35249 AP001486.3-201ENST00000615334 372 ntBASIC2.21□□□□□ -2.06
RFC4P35249 SDR42E1P4-201ENST00000620894 481 ntBASIC2.21□□□□□ -2.06
RFC4P35249 AP000553.5-201ENST00000641933 54 ntBASIC2.21□□□□□ -2.06
RFC4P35249 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
RFC4P35249 RNU6-188P-201ENST00000364207 107 ntBASIC2.2□□□□□ -2.06
RFC4P35249 Y_RNA.796-201ENST00000364268 102 ntBASIC2.2□□□□□ -2.06
RFC4P35249 Y_RNA.799-201ENST00000364992 102 ntBASIC2.2□□□□□ -2.06
RFC4P35249 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.2□□□□□ -2.06
RFC4P35249 AL441985.1-201ENST00000457727 251 ntBASIC2.2□□□□□ -2.06
RFC4P35249 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.2□□□□□ -2.06
RFC4P35249 AC112204.1-201ENST00000502591 103 ntBASIC2.2□□□□□ -2.06
RFC4P35249 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.2□□□□□ -2.06
RFC4P35249 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
RFC4P35249 AF213884.2-201ENST00000510417 903 ntBASIC2.2□□□□□ -2.06
RFC4P35249 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.2□□□□□ -2.06
RFC4P35249 RNA5SP445-201ENST00000515889 115 ntBASIC2.2□□□□□ -2.06
RFC4P35249 RNU6-759P-201ENST00000516740 103 ntBASIC2.2□□□□□ -2.06
RFC4P35249 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
RFC4P35249 AC008015.1-201ENST00000555505 465 ntBASIC2.2□□□□□ -2.06
RFC4P35249 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.2□□□□□ -2.06
RFC4P35249 MIR4529-201ENST00000578110 78 ntBASIC2.2□□□□□ -2.06
RFC4P35249 MIR4287-201ENST00000579398 78 ntBASIC2.2□□□□□ -2.06
RFC4P35249 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.2□□□□□ -2.06
RFC4P35249 AC073544.2-201ENST00000601155 540 ntBASIC2.2□□□□□ -2.06
RFC4P35249 AC018638.7-201ENST00000605836 1114 ntBASIC2.2□□□□□ -2.06
RFC4P35249 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
RFC4P35249 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
RFC4P35249 Y_RNA.116-201ENST00000363292 103 ntBASIC2.19□□□□□ -2.06
RFC4P35249 RNU6-511P-201ENST00000363496 107 ntBASIC2.19□□□□□ -2.06
RFC4P35249 SNORA16.1-201ENST00000364597 132 ntBASIC2.19□□□□□ -2.06
RFC4P35249 SNORA16B-201ENST00000364674 135 ntBASIC2.19□□□□□ -2.06
RFC4P35249 RNU1-148P-201ENST00000384472 162 ntBASIC2.19□□□□□ -2.06
RFC4P35249 RNU6-19P-201ENST00000384718 107 ntBASIC2.19□□□□□ -2.06
RFC4P35249 MIR518E-201ENST00000385252 88 ntBASIC2.19□□□□□ -2.06
RFC4P35249 RPS12P24-201ENST00000412619 387 ntBASIC2.19□□□□□ -2.06
RFC4P35249 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms