Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 RNU6-1037P-201ENST00000459571 107 ntBASIC3.53□□□□□ -1.84
SLC6A4P31645 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.53□□□□□ -1.84
SLC6A4P31645 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.53□□□□□ -1.84
SLC6A4P31645 RNU1-61P-201ENST00000516107 151 ntBASIC3.53□□□□□ -1.84
SLC6A4P31645 Y_RNA.670-201ENST00000516255 105 ntBASIC3.53□□□□□ -1.84
SLC6A4P31645 RNU6-327P-201ENST00000516270 127 ntBASIC3.53□□□□□ -1.84
SLC6A4P31645 RNU6-572P-201ENST00000516724 80 ntBASIC3.53□□□□□ -1.84
SLC6A4P31645 AC104576.1-201ENST00000524225 88 ntBASIC3.53□□□□□ -1.84
SLC6A4P31645 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.53□□□□□ -1.84
SLC6A4P31645 AL355802.3-201ENST00000607571 545 ntBASIC3.53□□□□□ -1.84
SLC6A4P31645 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.53□□□□□ -1.84
SLC6A4P31645 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
SLC6A4P31645 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SLC6A4P31645 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.53□□□□□ -1.84
SLC6A4P31645 AF127577.6-201ENST00000623352 2191 ntBASIC3.53□□□□□ -1.84
SLC6A4P31645 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SLC6A4P31645 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SLC6A4P31645 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.52□□□□□ -1.85
SLC6A4P31645 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SLC6A4P31645 Y_RNA.28-201ENST00000362554 111 ntBASIC3.52□□□□□ -1.85
SLC6A4P31645 RNU6-166P-201ENST00000384371 107 ntBASIC3.52□□□□□ -1.85
SLC6A4P31645 RNU6-933P-201ENST00000384424 107 ntBASIC3.52□□□□□ -1.85
SLC6A4P31645 MIR606-201ENST00000384851 96 ntBASIC3.52□□□□□ -1.85
SLC6A4P31645 SNORD73A-201ENST00000386062 65 ntBASIC3.52□□□□□ -1.85
SLC6A4P31645 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.52□□□□□ -1.85
SLC6A4P31645 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.52□□□□□ -1.85
SLC6A4P31645 HMGN2P7-201ENST00000456186 273 ntBASIC3.52□□□□□ -1.85
SLC6A4P31645 AC092798.1-201ENST00000458542 409 ntBASIC3.52□□□□□ -1.85
SLC6A4P31645 RNU7-187P-201ENST00000458985 68 ntBASIC3.52□□□□□ -1.85
SLC6A4P31645 RN7SL601P-201ENST00000471221 293 ntBASIC3.52□□□□□ -1.85
SLC6A4P31645 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.52□□□□□ -1.85
SLC6A4P31645 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.52□□□□□ -1.85
SLC6A4P31645 MIR4738-201ENST00000579134 87 ntBASIC3.52□□□□□ -1.85
SLC6A4P31645 AC011494.1-201ENST00000596454 237 ntBASIC3.52□□□□□ -1.85
SLC6A4P31645 AL360085.1-201ENST00000604713 532 ntBASIC3.52□□□□□ -1.85
SLC6A4P31645 AL162730.1-201ENST00000605734 292 ntBASIC3.52□□□□□ -1.85
SLC6A4P31645 FTX_3.1-201ENST00000610451 147 ntBASIC3.52□□□□□ -1.85
SLC6A4P31645 AC012531.5-201ENST00000611375 151 ntBASIC3.52□□□□□ -1.85
SLC6A4P31645 AC011890.2-201ENST00000613393 294 ntBASIC3.52□□□□□ -1.85
SLC6A4P31645 AL110115.1-201ENST00000614396 364 ntBASIC3.52□□□□□ -1.85
SLC6A4P31645 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.52□□□□□ -1.85
SLC6A4P31645 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.52□□□□□ -1.85
SLC6A4P31645 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
SLC6A4P31645 AL021368.2-201ENST00000606125 5352 ntBASIC3.52□□□□□ -1.85
SLC6A4P31645 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SLC6A4P31645 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.51□□□□□ -1.85
SLC6A4P31645 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SLC6A4P31645 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SLC6A4P31645 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.51□□□□□ -1.85
SLC6A4P31645 RNU6-1115P-201ENST00000362490 106 ntBASIC3.51□□□□□ -1.85
SLC6A4P31645 RNU6-639P-201ENST00000384074 107 ntBASIC3.51□□□□□ -1.85
SLC6A4P31645 RNU6-890P-201ENST00000384121 107 ntBASIC3.51□□□□□ -1.85
SLC6A4P31645 RNU6-738P-201ENST00000384531 106 ntBASIC3.51□□□□□ -1.85
SLC6A4P31645 RNU6-1160P-201ENST00000384546 104 ntBASIC3.51□□□□□ -1.85
SLC6A4P31645 RNU6-306P-201ENST00000384617 107 ntBASIC3.51□□□□□ -1.85
SLC6A4P31645 MIR325-201ENST00000385260 98 ntBASIC3.51□□□□□ -1.85
SLC6A4P31645 AC096664.2-201ENST00000411843 406 ntBASIC3.51□□□□□ -1.85
SLC6A4P31645 MTND2P23-201ENST00000422990 651 ntBASIC3.51□□□□□ -1.85
SLC6A4P31645 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.51□□□□□ -1.85
SLC6A4P31645 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SLC6A4P31645 USP9YP30-201ENST00000430729 455 ntBASIC3.51□□□□□ -1.85
SLC6A4P31645 MTATP6P7-201ENST00000453315 681 ntBASIC3.51□□□□□ -1.85
SLC6A4P31645 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.51□□□□□ -1.85
SLC6A4P31645 SNRPGP3-201ENST00000469405 227 ntBASIC3.51□□□□□ -1.85
SLC6A4P31645 RPS29P2-201ENST00000479278 136 ntBASIC3.51□□□□□ -1.85
SLC6A4P31645 AC018437.1-201ENST00000492214 406 ntBASIC3.51□□□□□ -1.85
SLC6A4P31645 AC139453.3-201ENST00000493276 369 ntBASIC3.51□□□□□ -1.85
SLC6A4P31645 FCF1P8-201ENST00000510322 597 ntBASIC3.51□□□□□ -1.85
SLC6A4P31645 NDUFB4P9-201ENST00000511646 388 ntBASIC3.51□□□□□ -1.85
SLC6A4P31645 SNORA70.14-201ENST00000516205 110 ntBASIC3.51□□□□□ -1.85
SLC6A4P31645 RNU6-1213P-201ENST00000517075 94 ntBASIC3.51□□□□□ -1.85
SLC6A4P31645 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.51□□□□□ -1.85
SLC6A4P31645 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.51□□□□□ -1.85
SLC6A4P31645 AC005476.1-201ENST00000554427 397 ntBASIC3.51□□□□□ -1.85
SLC6A4P31645 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.51□□□□□ -1.85
SLC6A4P31645 AC008121.1-201ENST00000603244 268 ntBASIC3.51□□□□□ -1.85
SLC6A4P31645 AC123912.5-201ENST00000605470 343 ntBASIC3.51□□□□□ -1.85
SLC6A4P31645 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.51□□□□□ -1.85
SLC6A4P31645 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
SLC6A4P31645 SCARNA4-202ENST00000625402 129 ntBASIC3.51□□□□□ -1.85
SLC6A4P31645 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SLC6A4P31645 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.51□□□□□ -1.85
SLC6A4P31645 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.51□□□□□ -1.85
SLC6A4P31645 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.51□□□□□ -1.85
SLC6A4P31645 CUL1P1-201ENST00000509510 2425 ntBASIC3.51□□□□□ -1.85
SLC6A4P31645 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
SLC6A4P31645 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SLC6A4P31645 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
SLC6A4P31645 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
SLC6A4P31645 RNU6-37P-201ENST00000362692 107 ntBASIC3.5□□□□□ -1.85
SLC6A4P31645 Y_RNA.132-201ENST00000363421 102 ntBASIC3.5□□□□□ -1.85
SLC6A4P31645 Y_RNA.151-201ENST00000363566 112 ntBASIC3.5□□□□□ -1.85
SLC6A4P31645 RNU6-11P-201ENST00000364234 107 ntBASIC3.5□□□□□ -1.85
SLC6A4P31645 RNU6-7-201ENST00000364784 107 ntBASIC3.5□□□□□ -1.85
SLC6A4P31645 RNU6-8-201ENST00000365467 107 ntBASIC3.5□□□□□ -1.85
SLC6A4P31645 RNU6-25P-201ENST00000383873 107 ntBASIC3.5□□□□□ -1.85
SLC6A4P31645 RNU6-1-201ENST00000383898 107 ntBASIC3.5□□□□□ -1.85
SLC6A4P31645 RNU6-48P-201ENST00000384161 107 ntBASIC3.5□□□□□ -1.85
SLC6A4P31645 RNU6-36P-201ENST00000384172 107 ntBASIC3.5□□□□□ -1.85
SLC6A4P31645 RNU6-4P-201ENST00000384205 107 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms