Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 PDCL2P1-201ENST00000419302 352 ntBASIC3.14□□□□□ -1.91
TNFSF4P23510 AL035423.1-201ENST00000420331 213 ntBASIC3.14□□□□□ -1.91
TNFSF4P23510 AC002075.2-201ENST00000425207 252 ntBASIC3.14□□□□□ -1.91
TNFSF4P23510 AC018644.1-201ENST00000429934 551 ntBASIC3.14□□□□□ -1.91
TNFSF4P23510 Z98742.2-201ENST00000431564 187 ntBASIC3.14□□□□□ -1.91
TNFSF4P23510 MICF-203ENST00000432679 129 ntBASIC3.14□□□□□ -1.91
TNFSF4P23510 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TNFSF4P23510 AL133547.1-201ENST00000448546 220 ntBASIC3.14□□□□□ -1.91
TNFSF4P23510 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.14□□□□□ -1.91
TNFSF4P23510 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.14□□□□□ -1.91
TNFSF4P23510 SNORD105B-201ENST00000458770 79 ntBASIC3.14□□□□□ -1.91
TNFSF4P23510 AC114801.2-201ENST00000503825 781 ntBASIC3.14□□□□□ -1.91
TNFSF4P23510 RPL39P5-202ENST00000512505 151 ntBASIC3.14□□□□□ -1.91
TNFSF4P23510 AC109329.1-201ENST00000518744 317 ntBASIC3.14□□□□□ -1.91
TNFSF4P23510 AC079598.5-201ENST00000547460 117 ntBASIC3.14□□□□□ -1.91
TNFSF4P23510 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.14□□□□□ -1.91
TNFSF4P23510 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.14□□□□□ -1.91
TNFSF4P23510 AC006130.2-201ENST00000586202 326 ntBASIC3.14□□□□□ -1.91
TNFSF4P23510 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.14□□□□□ -1.91
TNFSF4P23510 KLKP1-201ENST00000595979 403 ntBASIC3.14□□□□□ -1.91
TNFSF4P23510 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.14□□□□□ -1.91
TNFSF4P23510 AL355365.1-201ENST00000616480 294 ntBASIC3.14□□□□□ -1.91
TNFSF4P23510 AC005858.4-201ENST00000623191 700 ntBASIC3.14□□□□□ -1.91
TNFSF4P23510 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.14□□□□□ -1.91
TNFSF4P23510 MIR7157-201ENST00000635801 60 ntBASIC3.14□□□□□ -1.91
TNFSF4P23510 Z83843.1-201ENST00000604070 3685 ntBASIC3.14□□□□□ -1.91
TNFSF4P23510 ZNF826P-207ENST00000622273 1910 ntBASIC3.14□□□□□ -1.91
TNFSF4P23510 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TNFSF4P23510 AC002543.1-201ENST00000299783 1954 ntBASIC3.14□□□□□ -1.91
TNFSF4P23510 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
TNFSF4P23510 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.13□□□□□ -1.91
TNFSF4P23510 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
TNFSF4P23510 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
TNFSF4P23510 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.13□□□□□ -1.91
TNFSF4P23510 RNU6-486P-201ENST00000363116 107 ntBASIC3.13□□□□□ -1.91
TNFSF4P23510 SNORD81.2-201ENST00000365153 76 ntBASIC3.13□□□□□ -1.91
TNFSF4P23510 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
TNFSF4P23510 AL133475.1-201ENST00000404414 305 ntBASIC3.13□□□□□ -1.91
TNFSF4P23510 AL513477.1-202ENST00000417061 214 ntBASIC3.13□□□□□ -1.91
TNFSF4P23510 SAR1AP4-201ENST00000429225 591 ntBASIC3.13□□□□□ -1.91
TNFSF4P23510 AL445584.1-201ENST00000431451 330 ntBASIC3.13□□□□□ -1.91
TNFSF4P23510 AC243964.1-201ENST00000441814 261 ntBASIC3.13□□□□□ -1.91
TNFSF4P23510 USP9YP8-201ENST00000441913 500 ntBASIC3.13□□□□□ -1.91
TNFSF4P23510 RPL21P23-201ENST00000446654 460 ntBASIC3.13□□□□□ -1.91
TNFSF4P23510 MTND1P17-201ENST00000448961 204 ntBASIC3.13□□□□□ -1.91
TNFSF4P23510 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.13□□□□□ -1.91
TNFSF4P23510 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.13□□□□□ -1.91
TNFSF4P23510 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.13□□□□□ -1.91
TNFSF4P23510 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.13□□□□□ -1.91
TNFSF4P23510 Y_RNA.682-201ENST00000516457 100 ntBASIC3.13□□□□□ -1.91
TNFSF4P23510 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.13□□□□□ -1.91
TNFSF4P23510 AP005639.2-201ENST00000527592 928 ntBASIC3.13□□□□□ -1.91
TNFSF4P23510 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TNFSF4P23510 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.13□□□□□ -1.91
TNFSF4P23510 AC037471.2-201ENST00000564941 598 ntBASIC3.13□□□□□ -1.91
TNFSF4P23510 MIR4790-201ENST00000577799 79 ntBASIC3.13□□□□□ -1.91
TNFSF4P23510 AL356157.2-201ENST00000605122 111 ntBASIC3.13□□□□□ -1.91
TNFSF4P23510 MIR7851-201ENST00000610611 160 ntBASIC3.13□□□□□ -1.91
TNFSF4P23510 AC025253.1-201ENST00000613623 543 ntBASIC3.13□□□□□ -1.91
TNFSF4P23510 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.13□□□□□ -1.91
TNFSF4P23510 AC007792.1-201ENST00000623023 402 ntBASIC3.13□□□□□ -1.91
TNFSF4P23510 AC090617.7-201ENST00000623952 126 ntBASIC3.13□□□□□ -1.91
TNFSF4P23510 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
TNFSF4P23510 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.13□□□□□ -1.91
TNFSF4P23510 PWAR6-201ENST00000552334 4618 ntBASIC3.13□□□□□ -1.91
TNFSF4P23510 MTND4P12-201ENST00000498999 1377 ntBASIC3.12□□□□□ -1.91
TNFSF4P23510 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TNFSF4P23510 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TNFSF4P23510 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
TNFSF4P23510 RPL9P7-201ENST00000330965 580 ntBASIC3.12□□□□□ -1.91
TNFSF4P23510 MIR134-201ENST00000385258 73 ntBASIC3.12□□□□□ -1.91
TNFSF4P23510 AC097463.2-201ENST00000421074 142 ntBASIC3.12□□□□□ -1.91
TNFSF4P23510 AL590632.1-201ENST00000424289 371 ntBASIC3.12□□□□□ -1.91
TNFSF4P23510 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.12□□□□□ -1.91
TNFSF4P23510 HMGB1P18-201ENST00000438801 619 ntBASIC3.12□□□□□ -1.91
TNFSF4P23510 RPL9P9-202ENST00000466501 579 ntBASIC3.12□□□□□ -1.91
TNFSF4P23510 RN7SL542P-201ENST00000467147 294 ntBASIC3.12□□□□□ -1.91
TNFSF4P23510 AC093331.1-201ENST00000521474 169 ntBASIC3.12□□□□□ -1.91
TNFSF4P23510 COX6CP5-201ENST00000527162 228 ntBASIC3.12□□□□□ -1.91
TNFSF4P23510 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.12□□□□□ -1.91
TNFSF4P23510 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.12□□□□□ -1.91
TNFSF4P23510 AL591516.1-201ENST00000611326 274 ntBASIC3.12□□□□□ -1.91
TNFSF4P23510 AL133216.2-202ENST00000634512 349 ntBASIC3.12□□□□□ -1.91
TNFSF4P23510 AC241585.2-209ENST00000638217 143 ntBASIC3.12□□□□□ -1.91
TNFSF4P23510 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.12□□□□□ -1.91
TNFSF4P23510 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TNFSF4P23510 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.12□□□□□ -1.91
TNFSF4P23510 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TNFSF4P23510 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TNFSF4P23510 Z75746.1-201ENST00000440243 2080 ntBASIC3.12□□□□□ -1.91
TNFSF4P23510 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
TNFSF4P23510 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
TNFSF4P23510 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TNFSF4P23510 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.11□□□□□ -1.91
TNFSF4P23510 FAM35CP-201ENST00000554755 2470 ntBASIC3.11□□□□□ -1.91
TNFSF4P23510 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TNFSF4P23510 SNORD62.1-201ENST00000362541 86 ntBASIC3.11□□□□□ -1.91
TNFSF4P23510 RNU6-1222P-201ENST00000384615 107 ntBASIC3.11□□□□□ -1.91
TNFSF4P23510 RNU6-1009P-201ENST00000390996 107 ntBASIC3.11□□□□□ -1.91
TNFSF4P23510 HMGN2P8-201ENST00000391458 268 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 170 ms