| CPA3 | P15088 | AC096576.1-201 | ENST00000489014 | 359 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| CPA3 | P15088 | MGC32805-203 | ENST00000506053 | 652 nt | TSL 3 BASIC | 2.38 | □□□□□ -2.03 | | |
| CPA3 | P15088 | MTND3P25-201 | ENST00000509243 | 135 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| CPA3 | P15088 | AC079140.3-201 | ENST00000511111 | 550 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| CPA3 | P15088 | AC008700.1-202 | ENST00000513657 | 468 nt | TSL 5 BASIC | 2.38 | □□□□□ -2.03 | | |
| CPA3 | P15088 | SMURF2P1-201 | ENST00000514992 | 481 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| CPA3 | P15088 | RNA5SP112-201 | ENST00000515937 | 99 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| CPA3 | P15088 | AC079598.5-201 | ENST00000547460 | 117 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| CPA3 | P15088 | MTCYBP33-201 | ENST00000575007 | 1130 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| CPA3 | P15088 | AC105245.1-201 | ENST00000581934 | 244 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| CPA3 | P15088 | AC002115.1-201 | ENST00000589603 | 568 nt | TSL 4 BASIC | 2.38 | □□□□□ -2.03 | | |
| CPA3 | P15088 | AC067747.1-201 | ENST00000608026 | 250 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| CPA3 | P15088 | DLEU2_1.1-201 | ENST00000612089 | 120 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| CPA3 | P15088 | DLEU2_1.2-201 | ENST00000614667 | 120 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| CPA3 | P15088 | AL449363.1-201 | ENST00000617815 | 186 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| CPA3 | P15088 | U6.42-201 | ENST00000618440 | 107 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| CPA3 | P15088 | AL596220.1-201 | ENST00000622121 | 542 nt | TSL 4 BASIC | 2.38 | □□□□□ -2.03 | | |
| CPA3 | P15088 | AC009161.2-201 | ENST00000624626 | 138 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| CPA3 | P15088 | CD44-239 | ENST00000639002 | 528 nt | TSL 1 (best) BASIC | 2.38 | □□□□□ -2.03 | | |
| CPA3 | P15088 | SENP7-206 | ENST00000394094 | 4703 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.38 | □□□□□ -2.03 | | |
| CPA3 | P15088 | LRRCC1-202 | ENST00000414626 | 4493 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.37 | □□□□□ -2.03 | | |
| CPA3 | P15088 | ZMYM1-201 | ENST00000359858 | 4175 nt | APPRIS P1 TSL 1 (best) BASIC | 2.37 | □□□□□ -2.03 | | |
| CPA3 | P15088 | AMY2B-208 | ENST00000610648 | 1736 nt | APPRIS P1 TSL 1 (best) BASIC | 2.37 | □□□□□ -2.03 | | |
| CPA3 | P15088 | TAB2-205 | ENST00000538427 | 4240 nt | APPRIS P1 TSL 5 BASIC | 2.37 | □□□□□ -2.03 | | |
| CPA3 | P15088 | Z75746.1-201 | ENST00000440243 | 2080 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| CPA3 | P15088 | Y_RNA.159-201 | ENST00000363674 | 87 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| CPA3 | P15088 | SNORD114-30-201 | ENST00000364448 | 72 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| CPA3 | P15088 | RNU4-48P-201 | ENST00000365559 | 182 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| CPA3 | P15088 | EEF1E1-201 | ENST00000379715 | 1077 nt | APPRIS P1 TSL 1 (best) BASIC | 2.37 | □□□□□ -2.03 | | |
| CPA3 | P15088 | SNORD116-9-201 | ENST00000384000 | 95 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| CPA3 | P15088 | RNU6-1029P-201 | ENST00000384109 | 107 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| CPA3 | P15088 | SNORD116-3-201 | ENST00000384287 | 95 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| CPA3 | P15088 | SNORD116-7-201 | ENST00000384404 | 95 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| CPA3 | P15088 | SNORD116-5-201 | ENST00000384462 | 95 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| CPA3 | P15088 | MORN2-203 | ENST00000409131 | 544 nt | TSL 5 BASIC | 2.37 | □□□□□ -2.03 | | |
| CPA3 | P15088 | RNU2-3P-201 | ENST00000410144 | 191 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| CPA3 | P15088 | AC009158.1-206 | ENST00000417476 | 454 nt | TSL 3 BASIC | 2.37 | □□□□□ -2.03 | | |
| CPA3 | P15088 | AL669831.1-202 | ENST00000428504 | 417 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| CPA3 | P15088 | AL162725.2-201 | ENST00000430545 | 748 nt | TSL 5 BASIC | 2.37 | □□□□□ -2.03 | | |
| CPA3 | P15088 | GTF2IP13-201 | ENST00000438487 | 386 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| CPA3 | P15088 | AL157882.1-201 | ENST00000447148 | 429 nt | TSL 3 BASIC | 2.37 | □□□□□ -2.03 | | |
| CPA3 | P15088 | RNU7-182P-201 | ENST00000459009 | 62 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| CPA3 | P15088 | AC112771.1-201 | ENST00000463581 | 102 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| CPA3 | P15088 | MED28P2-201 | ENST00000475771 | 317 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| CPA3 | P15088 | RPL36AP48-201 | ENST00000485521 | 314 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| CPA3 | P15088 | AC018437.1-201 | ENST00000492214 | 406 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| CPA3 | P15088 | AC092436.1-201 | ENST00000506450 | 503 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| CPA3 | P15088 | MTCO3P9-201 | ENST00000506989 | 781 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| CPA3 | P15088 | AC008526.1-201 | ENST00000509149 | 338 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| CPA3 | P15088 | RNA5SP320-201 | ENST00000516263 | 124 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| CPA3 | P15088 | Y_RNA.687-201 | ENST00000516558 | 91 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| CPA3 | P15088 | AC092746.1-201 | ENST00000542819 | 562 nt | TSL 4 BASIC | 2.37 | □□□□□ -2.03 | | |
| CPA3 | P15088 | AC087260.1-201 | ENST00000546118 | 401 nt | TSL 5 BASIC | 2.37 | □□□□□ -2.03 | | |
| CPA3 | P15088 | AC078814.3-201 | ENST00000553036 | 491 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| CPA3 | P15088 | AL355076.2-202 | ENST00000553754 | 574 nt | TSL 4 BASIC | 2.37 | □□□□□ -2.03 | | |
| CPA3 | P15088 | AC006362.1-201 | ENST00000567392 | 174 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| CPA3 | P15088 | AC025449.1-201 | ENST00000603896 | 529 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| CPA3 | P15088 | RNU6-91P-201 | ENST00000607774 | 107 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| CPA3 | P15088 | AC069294.1-201 | ENST00000608397 | 350 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| CPA3 | P15088 | RMST_4.1-201 | ENST00000616886 | 107 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| CPA3 | P15088 | HIKESHI-208 | ENST00000618164 | 499 nt | TSL 5 BASIC | 2.37 | □□□□□ -2.03 | | |
| CPA3 | P15088 | AC092608.2-201 | ENST00000624427 | 218 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| CPA3 | P15088 | SEPT14P19-203 | ENST00000633205 | 211 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| CPA3 | P15088 | AC090582.1-201 | ENST00000636321 | 199 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| CPA3 | P15088 | ZNF720P1-201 | ENST00000562403 | 1939 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| CPA3 | P15088 | RNA5SP125-201 | ENST00000364843 | 120 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| CPA3 | P15088 | Y_RNA.359-201 | ENST00000365498 | 102 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| CPA3 | P15088 | SNORA51.11-201 | ENST00000384442 | 131 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| CPA3 | P15088 | TRDJ3-201 | ENST00000390476 | 59 nt | APPRIS P1 BASIC | 2.36 | □□□□□ -2.03 | | |
| CPA3 | P15088 | RNU2-52P-201 | ENST00000410680 | 190 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| CPA3 | P15088 | CYCSP33-201 | ENST00000414485 | 327 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| CPA3 | P15088 | CDK8P2-201 | ENST00000415020 | 547 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| CPA3 | P15088 | AC097463.2-201 | ENST00000421074 | 142 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| CPA3 | P15088 | PGBD4P6-201 | ENST00000421501 | 610 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| CPA3 | P15088 | AC003685.2-201 | ENST00000422795 | 395 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| CPA3 | P15088 | ARL5AP4-201 | ENST00000430731 | 512 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| CPA3 | P15088 | AL596276.1-201 | ENST00000434465 | 418 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| CPA3 | P15088 | AL451164.2-201 | ENST00000445932 | 597 nt | TSL 2 BASIC | 2.36 | □□□□□ -2.03 | | |
| CPA3 | P15088 | AL118520.1-201 | ENST00000450770 | 291 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| CPA3 | P15088 | AC114501.3-201 | ENST00000453648 | 164 nt | TSL 5 BASIC | 2.36 | □□□□□ -2.03 | | |
| CPA3 | P15088 | AL365295.1-201 | ENST00000454942 | 514 nt | TSL 5 BASIC | 2.36 | □□□□□ -2.03 | | |
| CPA3 | P15088 | OFD1P4Y-201 | ENST00000455273 | 1179 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| CPA3 | P15088 | TPT1P7-201 | ENST00000458300 | 517 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| CPA3 | P15088 | RPL31P3-201 | ENST00000458430 | 332 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| CPA3 | P15088 | AC117462.1-201 | ENST00000461186 | 554 nt | TSL 4 BASIC | 2.36 | □□□□□ -2.03 | | |
| CPA3 | P15088 | LINC02118-202 | ENST00000510583 | 419 nt | TSL 3 BASIC | 2.36 | □□□□□ -2.03 | | |
| CPA3 | P15088 | AC113145.1-201 | ENST00000522408 | 412 nt | TSL 5 BASIC | 2.36 | □□□□□ -2.03 | | |
| CPA3 | P15088 | AP002963.1-201 | ENST00000530590 | 184 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| CPA3 | P15088 | AC012100.2-201 | ENST00000558317 | 304 nt | TSL 5 BASIC | 2.36 | □□□□□ -2.03 | | |
| CPA3 | P15088 | AL391840.1-201 | ENST00000571144 | 367 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| CPA3 | P15088 | LINC02210-208 | ENST00000585118 | 546 nt | TSL 1 (best) BASIC | 2.36 | □□□□□ -2.03 | | |
| CPA3 | P15088 | AC079610.3-201 | ENST00000606960 | 147 nt | TSL 3 BASIC | 2.36 | □□□□□ -2.03 | | |
| CPA3 | P15088 | AC091834.1-201 | ENST00000614543 | 472 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| CPA3 | P15088 | AC009233.1-201 | ENST00000616477 | 371 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| CPA3 | P15088 | SRP54-214 | ENST00000630962 | 162 nt | TSL 5 BASIC | 2.36 | □□□□□ -2.03 | | |
| CPA3 | P15088 | LINC01090-203 | ENST00000632331 | 466 nt | TSL 5 BASIC | 2.36 | □□□□□ -2.03 | | |
| CPA3 | P15088 | U6.114-201 | ENST00000636407 | 96 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| CPA3 | P15088 | LRIF1-203 | ENST00000494675 | 1912 nt | APPRIS ALT2 TSL 2 BASIC | 2.36 | □□□□□ -2.03 | | |
| CPA3 | P15088 | AC009975.1-201 | ENST00000634588 | 2698 nt | TSL 5 BASIC | 2.35 | □□□□□ -2.03 | | |
| CPA3 | P15088 | CUL3-203 | ENST00000409096 | 2701 nt | TSL 1 (best) BASIC | 2.35 | □□□□□ -2.03 | | |