Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 AL354950.2-201ENST00000617939 290 ntBASIC3.6□□□□□ -1.83
HMGB1P09429 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HMGB1P09429 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.6□□□□□ -1.83
HMGB1P09429 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.59□□□□□ -1.83
HMGB1P09429 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
HMGB1P09429 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.59□□□□□ -1.83
HMGB1P09429 AC073325.2-201ENST00000339545 159 ntBASIC3.59□□□□□ -1.83
HMGB1P09429 Y_RNA.1-201ENST00000352915 104 ntBASIC3.59□□□□□ -1.83
HMGB1P09429 MIR22-201ENST00000362190 85 ntBASIC3.59□□□□□ -1.83
HMGB1P09429 Y_RNA.40-201ENST00000362645 93 ntBASIC3.59□□□□□ -1.83
HMGB1P09429 RNU1-140P-201ENST00000365040 165 ntBASIC3.59□□□□□ -1.83
HMGB1P09429 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.59□□□□□ -1.83
HMGB1P09429 RNU6-1245P-201ENST00000411130 106 ntBASIC3.59□□□□□ -1.83
HMGB1P09429 BTF3L4P1-201ENST00000413813 468 ntBASIC3.59□□□□□ -1.83
HMGB1P09429 AC244505.4-201ENST00000434905 287 ntBASIC3.59□□□□□ -1.83
HMGB1P09429 SSXP5-201ENST00000443473 287 ntBASIC3.59□□□□□ -1.83
HMGB1P09429 MTND2P22-201ENST00000444325 1033 ntBASIC3.59□□□□□ -1.83
HMGB1P09429 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.59□□□□□ -1.83
HMGB1P09429 TPT1P7-201ENST00000458300 517 ntBASIC3.59□□□□□ -1.83
HMGB1P09429 RN7SL75P-201ENST00000461926 281 ntBASIC3.59□□□□□ -1.83
HMGB1P09429 AL121594.1-201ENST00000475906 575 ntBASIC3.59□□□□□ -1.83
HMGB1P09429 RPL23AP45-201ENST00000476406 468 ntBASIC3.59□□□□□ -1.83
HMGB1P09429 RN7SL633P-201ENST00000488974 297 ntBASIC3.59□□□□□ -1.83
HMGB1P09429 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.59□□□□□ -1.83
HMGB1P09429 SNORA4.4-201ENST00000515921 135 ntBASIC3.59□□□□□ -1.83
HMGB1P09429 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.59□□□□□ -1.83
HMGB1P09429 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.59□□□□□ -1.83
HMGB1P09429 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.59□□□□□ -1.83
HMGB1P09429 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.59□□□□□ -1.83
HMGB1P09429 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
HMGB1P09429 AC002044.1-201ENST00000606707 158 ntBASIC3.59□□□□□ -1.83
HMGB1P09429 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
HMGB1P09429 FO624990.1-201ENST00000636373 85 ntBASIC3.59□□□□□ -1.83
HMGB1P09429 U4.7-201ENST00000638126 106 ntBASIC3.59□□□□□ -1.83
HMGB1P09429 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
HMGB1P09429 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HMGB1P09429 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
HMGB1P09429 Z82195.2-201ENST00000612348 18351 ntBASIC3.59□□□□□ -1.84
HMGB1P09429 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HMGB1P09429 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.58□□□□□ -1.84
HMGB1P09429 AC093831.2-201ENST00000624393 3427 ntBASIC3.58□□□□□ -1.84
HMGB1P09429 RNU1-23P-201ENST00000363361 144 ntBASIC3.58□□□□□ -1.84
HMGB1P09429 RNU6-1210P-201ENST00000363775 107 ntBASIC3.58□□□□□ -1.84
HMGB1P09429 SNORA38.1-201ENST00000364172 131 ntBASIC3.58□□□□□ -1.84
HMGB1P09429 RNU6-996P-201ENST00000365438 107 ntBASIC3.58□□□□□ -1.84
HMGB1P09429 Y_RNA.480-201ENST00000384364 102 ntBASIC3.58□□□□□ -1.84
HMGB1P09429 MIR544A-201ENST00000384855 91 ntBASIC3.58□□□□□ -1.84
HMGB1P09429 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.58□□□□□ -1.84
HMGB1P09429 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.58□□□□□ -1.84
HMGB1P09429 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.58□□□□□ -1.84
HMGB1P09429 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.58□□□□□ -1.84
HMGB1P09429 RPL39P29-201ENST00000447779 157 ntBASIC3.58□□□□□ -1.84
HMGB1P09429 RN7SL504P-201ENST00000494496 287 ntBASIC3.58□□□□□ -1.84
HMGB1P09429 SNORA48.11-201ENST00000517015 89 ntBASIC3.58□□□□□ -1.84
HMGB1P09429 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HMGB1P09429 AP003392.2-201ENST00000527269 208 ntBASIC3.58□□□□□ -1.84
HMGB1P09429 HIF1AP1-201ENST00000553642 175 ntBASIC3.58□□□□□ -1.84
HMGB1P09429 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.58□□□□□ -1.84
HMGB1P09429 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.58□□□□□ -1.84
HMGB1P09429 AC026422.1-201ENST00000623961 452 ntBASIC3.58□□□□□ -1.84
HMGB1P09429 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.58□□□□□ -1.84
HMGB1P09429 AC002543.1-201ENST00000299783 1954 ntBASIC3.58□□□□□ -1.84
HMGB1P09429 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
HMGB1P09429 RNU6-1119P-201ENST00000384349 108 ntBASIC3.57□□□□□ -1.84
HMGB1P09429 MIR23B-201ENST00000384832 97 ntBASIC3.57□□□□□ -1.84
HMGB1P09429 MIR95-201ENST00000385072 81 ntBASIC3.57□□□□□ -1.84
HMGB1P09429 Y_RNA.582-201ENST00000391023 95 ntBASIC3.57□□□□□ -1.84
HMGB1P09429 RPS4XP8-201ENST00000402039 771 ntBASIC3.57□□□□□ -1.84
HMGB1P09429 RNU4-55P-201ENST00000410731 137 ntBASIC3.57□□□□□ -1.84
HMGB1P09429 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.57□□□□□ -1.84
HMGB1P09429 MTCO2P19-201ENST00000427513 598 ntBASIC3.57□□□□□ -1.84
HMGB1P09429 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.57□□□□□ -1.84
HMGB1P09429 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.57□□□□□ -1.84
HMGB1P09429 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.57□□□□□ -1.84
HMGB1P09429 RNU7-193P-201ENST00000516723 65 ntBASIC3.57□□□□□ -1.84
HMGB1P09429 CKS1BP7-201ENST00000522230 235 ntBASIC3.57□□□□□ -1.84
HMGB1P09429 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.57□□□□□ -1.84
HMGB1P09429 AL137161.1-201ENST00000532231 390 ntBASIC3.57□□□□□ -1.84
HMGB1P09429 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HMGB1P09429 IMMP1LP2-201ENST00000552954 492 ntBASIC3.57□□□□□ -1.84
HMGB1P09429 AL355596.1-201ENST00000565399 3996 ntBASIC3.57□□□□□ -1.84
HMGB1P09429 RPS3AP23-202ENST00000574601 686 ntBASIC3.57□□□□□ -1.84
HMGB1P09429 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.57□□□□□ -1.84
HMGB1P09429 MIR4446-201ENST00000578505 67 ntBASIC3.57□□□□□ -1.84
HMGB1P09429 AP005136.1-201ENST00000579765 429 ntBASIC3.57□□□□□ -1.84
HMGB1P09429 PIGPP4-201ENST00000584447 307 ntBASIC3.57□□□□□ -1.84
HMGB1P09429 AC012507.3-201ENST00000603556 477 ntBASIC3.57□□□□□ -1.84
HMGB1P09429 AC123912.5-201ENST00000605470 343 ntBASIC3.57□□□□□ -1.84
HMGB1P09429 Z82243.1-201ENST00000609432 473 ntBASIC3.57□□□□□ -1.84
HMGB1P09429 AC005609.4-201ENST00000625071 447 ntBASIC3.57□□□□□ -1.84
HMGB1P09429 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.57□□□□□ -1.84
HMGB1P09429 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.56□□□□□ -1.84
HMGB1P09429 Z82209.1-201ENST00000422141 2135 ntBASIC3.56□□□□□ -1.84
HMGB1P09429 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
HMGB1P09429 RNU6-1103P-201ENST00000384150 107 ntBASIC3.56□□□□□ -1.84
HMGB1P09429 SNORA54-201ENST00000384281 123 ntBASIC3.56□□□□□ -1.84
HMGB1P09429 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.56□□□□□ -1.84
HMGB1P09429 SNRPGP7-201ENST00000469016 106 ntBASIC3.56□□□□□ -1.84
HMGB1P09429 RPL7P49-201ENST00000471402 708 ntBASIC3.56□□□□□ -1.84
HMGB1P09429 HMGB1P29-201ENST00000505659 499 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms