Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 AL160281.1-201ENST00000605307 311 ntBASIC2.95□□□□□ -1.94
MMP2P08253 AL162274.2-201ENST00000614406 332 ntBASIC2.95□□□□□ -1.94
MMP2P08253 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.95□□□□□ -1.94
MMP2P08253 AC103705.1-201ENST00000619013 241 ntBASIC2.95□□□□□ -1.94
MMP2P08253 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.95□□□□□ -1.94
MMP2P08253 DUXAP9-208ENST00000622815 614 ntBASIC2.95□□□□□ -1.94
MMP2P08253 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.95□□□□□ -1.94
MMP2P08253 MTND5P7-201ENST00000413558 1798 ntBASIC2.95□□□□□ -1.94
MMP2P08253 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
MMP2P08253 Y_RNA.88-201ENST00000363029 99 ntBASIC2.94□□□□□ -1.94
MMP2P08253 Y_RNA.167-201ENST00000363735 109 ntBASIC2.94□□□□□ -1.94
MMP2P08253 SNORD14B-201ENST00000364533 90 ntBASIC2.94□□□□□ -1.94
MMP2P08253 RNU6-384P-201ENST00000364900 104 ntBASIC2.94□□□□□ -1.94
MMP2P08253 MIR10A-201ENST00000385043 110 ntBASIC2.94□□□□□ -1.94
MMP2P08253 RPL5P18-201ENST00000406671 891 ntBASIC2.94□□□□□ -1.94
MMP2P08253 RNU2-3P-201ENST00000410144 191 ntBASIC2.94□□□□□ -1.94
MMP2P08253 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.94□□□□□ -1.94
MMP2P08253 AC009161.1-201ENST00000417306 376 ntBASIC2.94□□□□□ -1.94
MMP2P08253 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.94□□□□□ -1.94
MMP2P08253 RPL35AP12-201ENST00000425362 338 ntBASIC2.94□□□□□ -1.94
MMP2P08253 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.94□□□□□ -1.94
MMP2P08253 AL627311.1-201ENST00000431514 115 ntBASIC2.94□□□□□ -1.94
MMP2P08253 AL139132.1-201ENST00000431587 344 ntBASIC2.94□□□□□ -1.94
MMP2P08253 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.94□□□□□ -1.94
MMP2P08253 RPS29P6-201ENST00000438196 145 ntBASIC2.94□□□□□ -1.94
MMP2P08253 NDUFB1P2-201ENST00000449477 176 ntBASIC2.94□□□□□ -1.94
MMP2P08253 AP004217.1-201ENST00000480579 346 ntBASIC2.94□□□□□ -1.94
MMP2P08253 AC118273.2-201ENST00000532092 465 ntBASIC2.94□□□□□ -1.94
MMP2P08253 CYCSP39-201ENST00000565821 309 ntBASIC2.94□□□□□ -1.94
MMP2P08253 MIR548S-201ENST00000581352 82 ntBASIC2.94□□□□□ -1.94
MMP2P08253 AC018638.8-201ENST00000588755 281 ntBASIC2.94□□□□□ -1.94
MMP2P08253 BNIP3P25-201ENST00000596023 559 ntBASIC2.94□□□□□ -1.94
MMP2P08253 AC008739.2-201ENST00000597006 317 ntBASIC2.94□□□□□ -1.94
MMP2P08253 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.94□□□□□ -1.94
MMP2P08253 AC010620.2-201ENST00000600135 313 ntBASIC2.94□□□□□ -1.94
MMP2P08253 AL645944.1-201ENST00000603857 493 ntBASIC2.94□□□□□ -1.94
MMP2P08253 AC002044.1-201ENST00000606707 158 ntBASIC2.94□□□□□ -1.94
MMP2P08253 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.94□□□□□ -1.94
MMP2P08253 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.94□□□□□ -1.94
MMP2P08253 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
MMP2P08253 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
MMP2P08253 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.93□□□□□ -1.94
MMP2P08253 MTND5P19-201ENST00000424872 1794 ntBASIC2.93□□□□□ -1.94
MMP2P08253 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.93□□□□□ -1.94
MMP2P08253 RNU1-35P-201ENST00000362782 153 ntBASIC2.93□□□□□ -1.94
MMP2P08253 RNU6-266P-201ENST00000364225 107 ntBASIC2.93□□□□□ -1.94
MMP2P08253 SNORA32.2-201ENST00000384049 122 ntBASIC2.93□□□□□ -1.94
MMP2P08253 Y_RNA.480-201ENST00000384364 102 ntBASIC2.93□□□□□ -1.94
MMP2P08253 SNORA44-201ENST00000384584 132 ntBASIC2.93□□□□□ -1.94
MMP2P08253 SNORA48.2-201ENST00000390926 124 ntBASIC2.93□□□□□ -1.94
MMP2P08253 RNA5SP354-201ENST00000391247 136 ntBASIC2.93□□□□□ -1.94
MMP2P08253 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.93□□□□□ -1.94
MMP2P08253 AC138393.2-201ENST00000414742 246 ntBASIC2.93□□□□□ -1.94
MMP2P08253 RPLP0P7-201ENST00000416050 667 ntBASIC2.93□□□□□ -1.94
MMP2P08253 PGBD4P6-201ENST00000421501 610 ntBASIC2.93□□□□□ -1.94
MMP2P08253 HMGB1P9-201ENST00000429856 646 ntBASIC2.93□□□□□ -1.94
MMP2P08253 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.93□□□□□ -1.94
MMP2P08253 AC128713.1-201ENST00000471495 306 ntBASIC2.93□□□□□ -1.94
MMP2P08253 AC011005.2-201ENST00000487324 359 ntBASIC2.93□□□□□ -1.94
MMP2P08253 AC092185.1-201ENST00000491371 97 ntBASIC2.93□□□□□ -1.94
MMP2P08253 RPS27P26-201ENST00000494583 239 ntBASIC2.93□□□□□ -1.94
MMP2P08253 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.93□□□□□ -1.94
MMP2P08253 BTF3P12-201ENST00000519620 469 ntBASIC2.93□□□□□ -1.94
MMP2P08253 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.93□□□□□ -1.94
MMP2P08253 AP000763.2-201ENST00000540641 163 ntBASIC2.93□□□□□ -1.94
MMP2P08253 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.93□□□□□ -1.94
MMP2P08253 NACAP3-201ENST00000552100 481 ntBASIC2.93□□□□□ -1.94
MMP2P08253 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.93□□□□□ -1.94
MMP2P08253 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.93□□□□□ -1.94
MMP2P08253 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.93□□□□□ -1.94
MMP2P08253 AL355073.2-201ENST00000612106 557 ntBASIC2.93□□□□□ -1.94
MMP2P08253 RMST_4.1-201ENST00000616886 107 ntBASIC2.93□□□□□ -1.94
MMP2P08253 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.93□□□□□ -1.94
MMP2P08253 AC096644.4-201ENST00000563417 2912 ntBASIC2.93□□□□□ -1.94
MMP2P08253 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
MMP2P08253 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.93□□□□□ -1.94
MMP2P08253 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
MMP2P08253 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.92□□□□□ -1.94
MMP2P08253 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
MMP2P08253 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
MMP2P08253 Y_RNA.100-201ENST00000363141 102 ntBASIC2.92□□□□□ -1.94
MMP2P08253 Y_RNA.324-201ENST00000365165 102 ntBASIC2.92□□□□□ -1.94
MMP2P08253 SNORA9.2-201ENST00000365361 133 ntBASIC2.92□□□□□ -1.94
MMP2P08253 Z98749.2-208ENST00000381646 500 ntBASIC2.92□□□□□ -1.94
MMP2P08253 MIR128-1-201ENST00000384921 82 ntBASIC2.92□□□□□ -1.94
MMP2P08253 Y_RNA.604-201ENST00000410574 102 ntBASIC2.92□□□□□ -1.94
MMP2P08253 RNU6-1148P-201ENST00000410992 104 ntBASIC2.92□□□□□ -1.94
MMP2P08253 RN7SKP58-201ENST00000411010 305 ntBASIC2.92□□□□□ -1.94
MMP2P08253 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.92□□□□□ -1.94
MMP2P08253 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.92□□□□□ -1.94
MMP2P08253 SAR1AP4-201ENST00000429225 591 ntBASIC2.92□□□□□ -1.94
MMP2P08253 AC104332.2-201ENST00000429959 156 ntBASIC2.92□□□□□ -1.94
MMP2P08253 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.92□□□□□ -1.94
MMP2P08253 AC087884.1-201ENST00000469738 328 ntBASIC2.92□□□□□ -1.94
MMP2P08253 MTCO2P30-201ENST00000503662 364 ntBASIC2.92□□□□□ -1.94
MMP2P08253 AC114786.4-201ENST00000508771 728 ntBASIC2.92□□□□□ -1.94
MMP2P08253 AC010486.1-201ENST00000511793 424 ntBASIC2.92□□□□□ -1.94
MMP2P08253 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.92□□□□□ -1.94
MMP2P08253 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.92□□□□□ -1.94
MMP2P08253 SNORA14.1-201ENST00000516113 141 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms