Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.86
RHOP08100 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.46□□□□□ -1.86
RHOP08100 AC138393.1-203ENST00000327086 343 ntBASIC3.46□□□□□ -1.86
RHOP08100 Y_RNA.31-201ENST00000362574 102 ntBASIC3.46□□□□□ -1.86
RHOP08100 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.46□□□□□ -1.86
RHOP08100 RNU6-1329P-201ENST00000365664 107 ntBASIC3.46□□□□□ -1.86
RHOP08100 SNORA75B-201ENST00000384053 137 ntBASIC3.46□□□□□ -1.86
RHOP08100 U3.26-201ENST00000391236 204 ntBASIC3.46□□□□□ -1.86
RHOP08100 Y_RNA.594-201ENST00000410373 140 ntBASIC3.46□□□□□ -1.86
RHOP08100 MYL8P-204ENST00000431574 518 ntBASIC3.46□□□□□ -1.86
RHOP08100 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.46□□□□□ -1.86
RHOP08100 AC011005.2-201ENST00000487324 359 ntBASIC3.46□□□□□ -1.86
RHOP08100 AL160314.1-201ENST00000490836 438 ntBASIC3.46□□□□□ -1.86
RHOP08100 AC006445.1-201ENST00000491925 405 ntBASIC3.46□□□□□ -1.86
RHOP08100 RPL7P47-201ENST00000497299 556 ntBASIC3.46□□□□□ -1.86
RHOP08100 AC092436.3-201ENST00000511788 257 ntBASIC3.46□□□□□ -1.86
RHOP08100 SNORA70.19-201ENST00000516717 90 ntBASIC3.46□□□□□ -1.86
RHOP08100 RNU6-1213P-201ENST00000517075 94 ntBASIC3.46□□□□□ -1.86
RHOP08100 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.46□□□□□ -1.86
RHOP08100 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.46□□□□□ -1.86
RHOP08100 AC009229.3-201ENST00000608056 282 ntBASIC3.46□□□□□ -1.86
RHOP08100 AC019193.3-201ENST00000609144 554 ntBASIC3.46□□□□□ -1.86
RHOP08100 AL161423.1-201ENST00000613700 262 ntBASIC3.46□□□□□ -1.86
RHOP08100 AC022149.2-201ENST00000621061 203 ntBASIC3.46□□□□□ -1.86
RHOP08100 AF117829.1-206ENST00000621883 3802 ntBASIC3.46□□□□□ -1.86
RHOP08100 AL359693.1-201ENST00000614959 2407 ntBASIC3.46□□□□□ -1.86
RHOP08100 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
RHOP08100 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.45□□□□□ -1.86
RHOP08100 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
RHOP08100 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
RHOP08100 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
RHOP08100 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
RHOP08100 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
RHOP08100 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.45□□□□□ -1.86
RHOP08100 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
RHOP08100 AC117470.1-201ENST00000381974 330 ntBASIC3.45□□□□□ -1.86
RHOP08100 RNU6-639P-201ENST00000384074 107 ntBASIC3.45□□□□□ -1.86
RHOP08100 RNU6-890P-201ENST00000384121 107 ntBASIC3.45□□□□□ -1.86
RHOP08100 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
RHOP08100 SNORA75.6-201ENST00000391318 127 ntBASIC3.45□□□□□ -1.86
RHOP08100 RNU6-1050P-201ENST00000410388 107 ntBASIC3.45□□□□□ -1.86
RHOP08100 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.45□□□□□ -1.86
RHOP08100 AL590383.1-201ENST00000428602 75 ntBASIC3.45□□□□□ -1.86
RHOP08100 HMGB1P9-201ENST00000429856 646 ntBASIC3.45□□□□□ -1.86
RHOP08100 RN7SL93P-201ENST00000463035 293 ntBASIC3.45□□□□□ -1.86
RHOP08100 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.45□□□□□ -1.86
RHOP08100 RNU1-86P-201ENST00000516108 154 ntBASIC3.45□□□□□ -1.86
RHOP08100 Y_RNA.670-201ENST00000516255 105 ntBASIC3.45□□□□□ -1.86
RHOP08100 RNU1-107P-201ENST00000516617 154 ntBASIC3.45□□□□□ -1.86
RHOP08100 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.45□□□□□ -1.86
RHOP08100 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.45□□□□□ -1.86
RHOP08100 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.45□□□□□ -1.86
RHOP08100 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.45□□□□□ -1.86
RHOP08100 EIF4BP1-201ENST00000554881 351 ntBASIC3.45□□□□□ -1.86
RHOP08100 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.45□□□□□ -1.86
RHOP08100 AL451007.1-201ENST00000595491 289 ntBASIC3.45□□□□□ -1.86
RHOP08100 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.45□□□□□ -1.86
RHOP08100 ELOCP5-201ENST00000604924 333 ntBASIC3.45□□□□□ -1.86
RHOP08100 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.45□□□□□ -1.86
RHOP08100 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.45□□□□□ -1.86
RHOP08100 PISRT1.1-201ENST00000616930 107 ntBASIC3.45□□□□□ -1.86
RHOP08100 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.45□□□□□ -1.86
RHOP08100 PLCE1P1-201ENST00000622094 305 ntBASIC3.45□□□□□ -1.86
RHOP08100 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.45□□□□□ -1.86
RHOP08100 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
RHOP08100 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
RHOP08100 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
RHOP08100 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.45□□□□□ -1.86
RHOP08100 AL513302.2-201ENST00000562313 1842 ntBASIC3.44□□□□□ -1.86
RHOP08100 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
RHOP08100 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
RHOP08100 MIR422A-201ENST00000362286 90 ntBASIC3.44□□□□□ -1.86
RHOP08100 Y_RNA.5-201ENST00000362334 102 ntBASIC3.44□□□□□ -1.86
RHOP08100 RNU1-18P-201ENST00000363062 164 ntBASIC3.44□□□□□ -1.86
RHOP08100 RNU6-1179P-201ENST00000384667 107 ntBASIC3.44□□□□□ -1.86
RHOP08100 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.44□□□□□ -1.86
RHOP08100 AC018865.2-201ENST00000423631 129 ntBASIC3.44□□□□□ -1.86
RHOP08100 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.44□□□□□ -1.86
RHOP08100 NDUFB1P2-201ENST00000449477 176 ntBASIC3.44□□□□□ -1.86
RHOP08100 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.44□□□□□ -1.86
RHOP08100 RNU7-170P-201ENST00000459303 61 ntBASIC3.44□□□□□ -1.86
RHOP08100 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.44□□□□□ -1.86
RHOP08100 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.44□□□□□ -1.86
RHOP08100 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.44□□□□□ -1.86
RHOP08100 MIR892C-201ENST00000516410 77 ntBASIC3.44□□□□□ -1.86
RHOP08100 RNU6-988P-201ENST00000519081 107 ntBASIC3.44□□□□□ -1.86
RHOP08100 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.44□□□□□ -1.86
RHOP08100 TRAV37-201ENST00000553906 342 ntBASIC3.44□□□□□ -1.86
RHOP08100 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.44□□□□□ -1.86
RHOP08100 RNU6-85P-201ENST00000605989 107 ntBASIC3.44□□□□□ -1.86
RHOP08100 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
RHOP08100 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
RHOP08100 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.44□□□□□ -1.86
RHOP08100 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.44□□□□□ -1.86
RHOP08100 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
RHOP08100 AC008568.2-201ENST00000623862 2313 ntBASIC3.43□□□□□ -1.86
RHOP08100 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.43□□□□□ -1.86
RHOP08100 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RHOP08100 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
RHOP08100 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms