Protein–RNA interactions for Protein: P04049

RAF1, RAF proto-oncogene serine/threonine-protein kinase, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1P04049 RNU6-1127P-201ENST00000384580 107 ntBASIC2.68□□□□□ -1.98
RAF1P04049 RNU6-332P-201ENST00000391193 108 ntBASIC2.68□□□□□ -1.98
RAF1P04049 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
RAF1P04049 RNA5SP118-201ENST00000410385 109 ntBASIC2.68□□□□□ -1.98
RAF1P04049 EEF1A1P40-201ENST00000412883 573 ntBASIC2.68□□□□□ -1.98
RAF1P04049 AL365496.1-201ENST00000426885 215 ntBASIC2.68□□□□□ -1.98
RAF1P04049 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.68□□□□□ -1.98
RAF1P04049 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.68□□□□□ -1.98
RAF1P04049 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.68□□□□□ -1.98
RAF1P04049 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.68□□□□□ -1.98
RAF1P04049 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.68□□□□□ -1.98
RAF1P04049 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.68□□□□□ -1.98
RAF1P04049 RN7SL20P-201ENST00000488827 297 ntBASIC2.68□□□□□ -1.98
RAF1P04049 AC018710.1-201ENST00000506509 158 ntBASIC2.68□□□□□ -1.98
RAF1P04049 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.68□□□□□ -1.98
RAF1P04049 AC091826.1-201ENST00000514065 313 ntBASIC2.68□□□□□ -1.98
RAF1P04049 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.68□□□□□ -1.98
RAF1P04049 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.68□□□□□ -1.98
RAF1P04049 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.68□□□□□ -1.98
RAF1P04049 AL118558.2-201ENST00000556294 238 ntBASIC2.68□□□□□ -1.98
RAF1P04049 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.68□□□□□ -1.98
RAF1P04049 RNU6-89P-201ENST00000606519 100 ntBASIC2.68□□□□□ -1.98
RAF1P04049 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.68□□□□□ -1.98
RAF1P04049 uc_338.34-201ENST00000617467 174 ntBASIC2.68□□□□□ -1.98
RAF1P04049 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
RAF1P04049 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.68□□□□□ -1.98
RAF1P04049 AL512643.1-201ENST00000635735 524 ntBASIC2.68□□□□□ -1.98
RAF1P04049 MTND4P14-201ENST00000435799 1354 ntBASIC2.68□□□□□ -1.98
RAF1P04049 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.68□□□□□ -1.98
RAF1P04049 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
RAF1P04049 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
RAF1P04049 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.68□□□□□ -1.98
RAF1P04049 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.67□□□□□ -1.98
RAF1P04049 Y_RNA.86-201ENST00000363020 111 ntBASIC2.67□□□□□ -1.98
RAF1P04049 Y_RNA.231-201ENST00000364358 102 ntBASIC2.67□□□□□ -1.98
RAF1P04049 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
RAF1P04049 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.67□□□□□ -1.98
RAF1P04049 AL356776.1-201ENST00000406574 447 ntBASIC2.67□□□□□ -1.98
RAF1P04049 RN7SKP220-201ENST00000410611 288 ntBASIC2.67□□□□□ -1.98
RAF1P04049 RNU6-373P-201ENST00000411247 98 ntBASIC2.67□□□□□ -1.98
RAF1P04049 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.67□□□□□ -1.98
RAF1P04049 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.67□□□□□ -1.98
RAF1P04049 AC009414.1-201ENST00000427200 443 ntBASIC2.67□□□□□ -1.98
RAF1P04049 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.67□□□□□ -1.98
RAF1P04049 AL591704.1-201ENST00000432574 275 ntBASIC2.67□□□□□ -1.98
RAF1P04049 ERLEC1P1-201ENST00000433806 578 ntBASIC2.67□□□□□ -1.98
RAF1P04049 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.67□□□□□ -1.98
RAF1P04049 SCARNA18-201ENST00000459004 134 ntBASIC2.67□□□□□ -1.98
RAF1P04049 RPL21P99-201ENST00000480369 423 ntBASIC2.67□□□□□ -1.98
RAF1P04049 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.67□□□□□ -1.98
RAF1P04049 AC139453.3-201ENST00000493276 369 ntBASIC2.67□□□□□ -1.98
RAF1P04049 RNA5SP367-201ENST00000516557 118 ntBASIC2.67□□□□□ -1.98
RAF1P04049 RNU6-826P-201ENST00000516827 104 ntBASIC2.67□□□□□ -1.98
RAF1P04049 SNORA20.3-201ENST00000516880 132 ntBASIC2.67□□□□□ -1.98
RAF1P04049 MTND4P7-201ENST00000523876 130 ntBASIC2.67□□□□□ -1.98
RAF1P04049 HSPE1P20-201ENST00000538133 289 ntBASIC2.67□□□□□ -1.98
RAF1P04049 AC078814.3-201ENST00000553036 491 ntBASIC2.67□□□□□ -1.98
RAF1P04049 AL121579.1-201ENST00000555129 305 ntBASIC2.67□□□□□ -1.98
RAF1P04049 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.67□□□□□ -1.98
RAF1P04049 AC008739.2-201ENST00000597006 317 ntBASIC2.67□□□□□ -1.98
RAF1P04049 AL355877.2-201ENST00000603670 358 ntBASIC2.67□□□□□ -1.98
RAF1P04049 AL355073.2-201ENST00000612106 557 ntBASIC2.67□□□□□ -1.98
RAF1P04049 DUSP12P1-201ENST00000612874 516 ntBASIC2.67□□□□□ -1.98
RAF1P04049 MIR6715A-201ENST00000615929 79 ntBASIC2.67□□□□□ -1.98
RAF1P04049 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RAF1P04049 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.66□□□□□ -1.98
RAF1P04049 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.66□□□□□ -1.98
RAF1P04049 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
RAF1P04049 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.66□□□□□ -1.98
RAF1P04049 AC008669.1-201ENST00000565823 2178 ntBASIC2.66□□□□□ -1.98
RAF1P04049 Y_RNA.157-201ENST00000363638 102 ntBASIC2.66□□□□□ -1.98
RAF1P04049 RNU6-371P-201ENST00000364283 108 ntBASIC2.66□□□□□ -1.98
RAF1P04049 RNU1-73P-201ENST00000383971 164 ntBASIC2.66□□□□□ -1.98
RAF1P04049 AL445529.1-201ENST00000398713 389 ntBASIC2.66□□□□□ -1.98
RAF1P04049 Y_RNA.615-201ENST00000410769 117 ntBASIC2.66□□□□□ -1.98
RAF1P04049 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.66□□□□□ -1.98
RAF1P04049 SKA2P1-201ENST00000425592 390 ntBASIC2.66□□□□□ -1.98
RAF1P04049 AL669831.1-202ENST00000428504 417 ntBASIC2.66□□□□□ -1.98
RAF1P04049 RPS15AP5-201ENST00000436276 388 ntBASIC2.66□□□□□ -1.98
RAF1P04049 AL121601.2-201ENST00000438019 707 ntBASIC2.66□□□□□ -1.98
RAF1P04049 GTF2IP13-201ENST00000438487 386 ntBASIC2.66□□□□□ -1.98
RAF1P04049 RPL37P4-201ENST00000448908 268 ntBASIC2.66□□□□□ -1.98
RAF1P04049 RPS15AP27-201ENST00000449183 343 ntBASIC2.66□□□□□ -1.98
RAF1P04049 AC008571.1-201ENST00000467232 300 ntBASIC2.66□□□□□ -1.98
RAF1P04049 RPS27AP10-201ENST00000496103 208 ntBASIC2.66□□□□□ -1.98
RAF1P04049 MTCO2P30-201ENST00000503662 364 ntBASIC2.66□□□□□ -1.98
RAF1P04049 AC091885.1-201ENST00000506658 268 ntBASIC2.66□□□□□ -1.98
RAF1P04049 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.66□□□□□ -1.98
RAF1P04049 RNU6-1038P-201ENST00000516516 104 ntBASIC2.66□□□□□ -1.98
RAF1P04049 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.66□□□□□ -1.98
RAF1P04049 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.66□□□□□ -1.98
RAF1P04049 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.66□□□□□ -1.98
RAF1P04049 MIR4435-1-201ENST00000582552 80 ntBASIC2.66□□□□□ -1.98
RAF1P04049 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.66□□□□□ -1.98
RAF1P04049 BNIP3P10-201ENST00000605360 577 ntBASIC2.66□□□□□ -1.98
RAF1P04049 RPL23AP88-201ENST00000605759 454 ntBASIC2.66□□□□□ -1.98
RAF1P04049 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.66□□□□□ -1.98
RAF1P04049 AC009033.1-201ENST00000624279 431 ntBASIC2.66□□□□□ -1.98
RAF1P04049 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
RAF1P04049 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms