Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 SNORD33-201ENST00000362761 85 ntBASIC0.57□□□□□ -2.32
TNFP01375 RNU6-942P-201ENST00000363002 107 ntBASIC0.57□□□□□ -2.32
TNFP01375 MIR216A-201ENST00000385063 110 ntBASIC0.57□□□□□ -2.32
TNFP01375 RNU2-64P-201ENST00000411315 191 ntBASIC0.57□□□□□ -2.32
TNFP01375 TPMTP3-201ENST00000411928 735 ntBASIC0.57□□□□□ -2.32
TNFP01375 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.57□□□□□ -2.32
TNFP01375 AC139712.2-201ENST00000424302 339 ntBASIC0.57□□□□□ -2.32
TNFP01375 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.57□□□□□ -2.32
TNFP01375 AL160314.1-201ENST00000490836 438 ntBASIC0.57□□□□□ -2.32
TNFP01375 AC067942.3-201ENST00000512025 362 ntBASIC0.57□□□□□ -2.32
TNFP01375 PTP4A1P4-201ENST00000512479 322 ntBASIC0.57□□□□□ -2.32
TNFP01375 RNVU1-2-201ENST00000516326 135 ntBASIC0.57□□□□□ -2.32
TNFP01375 RNA5SP290-201ENST00000517133 127 ntBASIC0.57□□□□□ -2.32
TNFP01375 SULT1C2P1-202ENST00000562418 459 ntBASIC0.57□□□□□ -2.32
TNFP01375 AC005951.2-201ENST00000576282 495 ntBASIC0.57□□□□□ -2.32
TNFP01375 AL020997.3-201ENST00000602843 359 ntBASIC0.57□□□□□ -2.32
TNFP01375 HSBP1P2-201ENST00000299671 229 ntBASIC0.56□□□□□ -2.32
TNFP01375 Y_RNA.393-201ENST00000383936 102 ntBASIC0.56□□□□□ -2.32
TNFP01375 AC005345.1-201ENST00000431868 217 ntBASIC0.56□□□□□ -2.32
TNFP01375 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.56□□□□□ -2.32
TNFP01375 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.56□□□□□ -2.32
TNFP01375 AL353691.1-201ENST00000451332 387 ntBASIC0.56□□□□□ -2.32
TNFP01375 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.56□□□□□ -2.32
TNFP01375 AC010409.1-201ENST00000487382 476 ntBASIC0.56□□□□□ -2.32
TNFP01375 HMGN1P13-201ENST00000505795 138 ntBASIC0.56□□□□□ -2.32
TNFP01375 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC0.56□□□□□ -2.32
TNFP01375 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC0.56□□□□□ -2.32
TNFP01375 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.56□□□□□ -2.32
TNFP01375 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC0.56□□□□□ -2.32
TNFP01375 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC0.56□□□□□ -2.32
TNFP01375 AC112220.3-201ENST00000605502 502 ntBASIC0.56□□□□□ -2.32
TNFP01375 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
TNFP01375 MTCO1P18-201ENST00000455518 1419 ntBASIC0.55□□□□□ -2.32
TNFP01375 Y_RNA.36-201ENST00000362602 112 ntBASIC0.55□□□□□ -2.32
TNFP01375 SNORA4.1-201ENST00000364263 144 ntBASIC0.55□□□□□ -2.32
TNFP01375 Y_RNA.466-201ENST00000384294 113 ntBASIC0.55□□□□□ -2.32
TNFP01375 Y_RNA.540-201ENST00000384638 111 ntBASIC0.55□□□□□ -2.32
TNFP01375 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.55□□□□□ -2.32
TNFP01375 FAM204CP-201ENST00000424489 642 ntBASIC0.55□□□□□ -2.32
TNFP01375 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
TNFP01375 AL591043.1-201ENST00000432461 424 ntBASIC0.55□□□□□ -2.32
TNFP01375 AC092628.1-201ENST00000436250 252 ntBASIC0.55□□□□□ -2.32
TNFP01375 RPL32P14-201ENST00000463196 378 ntBASIC0.55□□□□□ -2.32
TNFP01375 AC011005.2-201ENST00000487324 359 ntBASIC0.55□□□□□ -2.32
TNFP01375 AC145146.1-201ENST00000496370 254 ntBASIC0.55□□□□□ -2.32
TNFP01375 AC084024.2-201ENST00000503480 791 ntBASIC0.55□□□□□ -2.32
TNFP01375 RNU6-586P-201ENST00000517265 104 ntBASIC0.55□□□□□ -2.32
TNFP01375 IGJP1-201ENST00000522682 475 ntBASIC0.55□□□□□ -2.32
TNFP01375 AP000763.2-201ENST00000540641 163 ntBASIC0.55□□□□□ -2.32
TNFP01375 RN7SL793P-201ENST00000583259 296 ntBASIC0.55□□□□□ -2.32
TNFP01375 AL512605.2-201ENST00000592972 256 ntBASIC0.55□□□□□ -2.32
TNFP01375 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.55□□□□□ -2.32
TNFP01375 MIR98-201ENST00000606724 119 ntBASIC0.55□□□□□ -2.32
TNFP01375 BX284668.6-201ENST00000606899 438 ntBASIC0.55□□□□□ -2.32
TNFP01375 AL603758.1-201ENST00000618654 241 ntBASIC0.55□□□□□ -2.32
TNFP01375 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
TNFP01375 HAUS6P2-201ENST00000433254 2404 ntBASIC0.54□□□□□ -2.32
TNFP01375 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
TNFP01375 RNU6-611P-201ENST00000384276 104 ntBASIC0.54□□□□□ -2.32
TNFP01375 MIR92A1-201ENST00000385233 78 ntBASIC0.54□□□□□ -2.32
TNFP01375 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.54□□□□□ -2.32
TNFP01375 AC019178.2-201ENST00000423595 505 ntBASIC0.54□□□□□ -2.32
TNFP01375 AC087477.1-201ENST00000465747 340 ntBASIC0.54□□□□□ -2.32
TNFP01375 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.54□□□□□ -2.32
TNFP01375 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.54□□□□□ -2.32
TNFP01375 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.54□□□□□ -2.32
TNFP01375 RNU6-322P-201ENST00000516010 103 ntBASIC0.54□□□□□ -2.32
TNFP01375 SNORD116-28-201ENST00000516123 91 ntBASIC0.54□□□□□ -2.32
TNFP01375 Y_RNA.670-201ENST00000516255 105 ntBASIC0.54□□□□□ -2.32
TNFP01375 RNA5SP480-201ENST00000516840 109 ntBASIC0.54□□□□□ -2.32
TNFP01375 AC103833.1-201ENST00000517442 172 ntBASIC0.54□□□□□ -2.32
TNFP01375 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC0.54□□□□□ -2.32
TNFP01375 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.54□□□□□ -2.32
TNFP01375 MTCO2P15-201ENST00000532655 656 ntBASIC0.54□□□□□ -2.32
TNFP01375 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
TNFP01375 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC0.54□□□□□ -2.32
TNFP01375 CR383656.8-201ENST00000549046 145 ntBASIC0.54□□□□□ -2.32
TNFP01375 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.54□□□□□ -2.32
TNFP01375 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.54□□□□□ -2.32
TNFP01375 AC004817.2-201ENST00000561794 651 ntBASIC0.54□□□□□ -2.32
TNFP01375 AC011712.1-201ENST00000588959 234 ntBASIC0.54□□□□□ -2.32
TNFP01375 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC0.54□□□□□ -2.32
TNFP01375 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.54□□□□□ -2.32
TNFP01375 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.54□□□□□ -2.32
TNFP01375 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC0.54□□□□□ -2.32
TNFP01375 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
TNFP01375 RNU6-37P-201ENST00000362692 107 ntBASIC0.53□□□□□ -2.32
TNFP01375 RNU6-11P-201ENST00000364234 107 ntBASIC0.53□□□□□ -2.32
TNFP01375 MIR506-201ENST00000384998 124 ntBASIC0.53□□□□□ -2.32
TNFP01375 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.53□□□□□ -2.32
TNFP01375 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.53□□□□□ -2.32
TNFP01375 JTBP1-201ENST00000441314 247 ntBASIC0.53□□□□□ -2.32
TNFP01375 AL353718.1-201ENST00000451028 517 ntBASIC0.53□□□□□ -2.32
TNFP01375 ATP5J2P3-201ENST00000451550 258 ntBASIC0.53□□□□□ -2.32
TNFP01375 RPL23AP35-201ENST00000451906 501 ntBASIC0.53□□□□□ -2.32
TNFP01375 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC0.53□□□□□ -2.32
TNFP01375 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.53□□□□□ -2.32
TNFP01375 RNU6-229P-201ENST00000516614 102 ntBASIC0.53□□□□□ -2.32
TNFP01375 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.53□□□□□ -2.32
TNFP01375 BPTFP1-201ENST00000579209 492 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms