Protein–RNA interactions for Protein: O95521

PRAMEF1, PRAME family member 1, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1O95521 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PRAMEF1O95521 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PRAMEF1O95521 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PRAMEF1O95521 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
PRAMEF1O95521 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.03□□□□□ -1.76
PRAMEF1O95521 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PRAMEF1O95521 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PRAMEF1O95521 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.03□□□□□ -1.77
PRAMEF1O95521 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PRAMEF1O95521 ZNF962P-201ENST00000443465 3140 ntBASIC4.02□□□□□ -1.77
PRAMEF1O95521 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
PRAMEF1O95521 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.02□□□□□ -1.77
PRAMEF1O95521 SNORD27-201ENST00000363981 72 ntBASIC4.02□□□□□ -1.77
PRAMEF1O95521 Y_RNA.237-201ENST00000364439 102 ntBASIC4.02□□□□□ -1.77
PRAMEF1O95521 RNU4-9P-201ENST00000364951 139 ntBASIC4.02□□□□□ -1.77
PRAMEF1O95521 RNU6-140P-201ENST00000384566 108 ntBASIC4.02□□□□□ -1.77
PRAMEF1O95521 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
PRAMEF1O95521 AL356095.1-201ENST00000417217 199 ntBASIC4.02□□□□□ -1.77
PRAMEF1O95521 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.02□□□□□ -1.77
PRAMEF1O95521 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.02□□□□□ -1.77
PRAMEF1O95521 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.02□□□□□ -1.77
PRAMEF1O95521 AC006026.2-201ENST00000457376 180 ntBASIC4.02□□□□□ -1.77
PRAMEF1O95521 AC078817.1-201ENST00000492623 435 ntBASIC4.02□□□□□ -1.77
PRAMEF1O95521 RN7SKP40-201ENST00000517211 242 ntBASIC4.02□□□□□ -1.77
PRAMEF1O95521 AP004607.1-201ENST00000524456 203 ntBASIC4.02□□□□□ -1.77
PRAMEF1O95521 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.02□□□□□ -1.77
PRAMEF1O95521 MIR4300-201ENST00000581016 96 ntBASIC4.02□□□□□ -1.77
PRAMEF1O95521 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.02□□□□□ -1.77
PRAMEF1O95521 AC012603.1-201ENST00000606424 528 ntBASIC4.02□□□□□ -1.77
PRAMEF1O95521 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.02□□□□□ -1.77
PRAMEF1O95521 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.02□□□□□ -1.77
PRAMEF1O95521 MIR6868-201ENST00000611215 58 ntBASIC4.02□□□□□ -1.77
PRAMEF1O95521 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.02□□□□□ -1.77
PRAMEF1O95521 AL773545.4-201ENST00000637262 310 ntBASIC4.02□□□□□ -1.77
PRAMEF1O95521 AL513478.4-201ENST00000641636 310 ntBASIC4.02□□□□□ -1.77
PRAMEF1O95521 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PRAMEF1O95521 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PRAMEF1O95521 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
PRAMEF1O95521 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
PRAMEF1O95521 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
PRAMEF1O95521 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
PRAMEF1O95521 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
PRAMEF1O95521 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
PRAMEF1O95521 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
PRAMEF1O95521 AL391987.6-201ENST00000305671 199 ntBASIC4.01□□□□□ -1.77
PRAMEF1O95521 snoU2_19.2-201ENST00000363024 80 ntBASIC4.01□□□□□ -1.77
PRAMEF1O95521 SNORD81.1-201ENST00000363064 77 ntBASIC4.01□□□□□ -1.77
PRAMEF1O95521 RNU6-1062P-201ENST00000383908 107 ntBASIC4.01□□□□□ -1.77
PRAMEF1O95521 RNU6-1279P-201ENST00000383917 103 ntBASIC4.01□□□□□ -1.77
PRAMEF1O95521 MIR215-201ENST00000384858 110 ntBASIC4.01□□□□□ -1.77
PRAMEF1O95521 MIR1251-201ENST00000408552 70 ntBASIC4.01□□□□□ -1.77
PRAMEF1O95521 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.01□□□□□ -1.77
PRAMEF1O95521 AL358453.1-201ENST00000422522 250 ntBASIC4.01□□□□□ -1.77
PRAMEF1O95521 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.01□□□□□ -1.77
PRAMEF1O95521 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.01□□□□□ -1.77
PRAMEF1O95521 RPL21P40-201ENST00000428586 483 ntBASIC4.01□□□□□ -1.77
PRAMEF1O95521 AL591043.1-201ENST00000432461 424 ntBASIC4.01□□□□□ -1.77
PRAMEF1O95521 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.01□□□□□ -1.77
PRAMEF1O95521 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC4.01□□□□□ -1.77
PRAMEF1O95521 RN7SL271P-201ENST00000487601 295 ntBASIC4.01□□□□□ -1.77
PRAMEF1O95521 AL132838.2-201ENST00000492041 314 ntBASIC4.01□□□□□ -1.77
PRAMEF1O95521 RPS23P5-201ENST00000495419 428 ntBASIC4.01□□□□□ -1.77
PRAMEF1O95521 RNU6-1183P-201ENST00000517054 60 ntBASIC4.01□□□□□ -1.77
PRAMEF1O95521 AC090617.3-201ENST00000573670 475 ntBASIC4.01□□□□□ -1.77
PRAMEF1O95521 AC136932.1-201ENST00000574771 208 ntBASIC4.01□□□□□ -1.77
PRAMEF1O95521 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.01□□□□□ -1.77
PRAMEF1O95521 VN1R85P-201ENST00000601587 426 ntBASIC4.01□□□□□ -1.77
PRAMEF1O95521 AC024153.1-201ENST00000603103 365 ntBASIC4.01□□□□□ -1.77
PRAMEF1O95521 AC009779.6-201ENST00000603972 165 ntBASIC4.01□□□□□ -1.77
PRAMEF1O95521 MIR6867-201ENST00000610636 67 ntBASIC4.01□□□□□ -1.77
PRAMEF1O95521 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PRAMEF1O95521 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.01□□□□□ -1.77
PRAMEF1O95521 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PRAMEF1O95521 LINC02555-201ENST00000563933 1951 ntBASIC4.01□□□□□ -1.77
PRAMEF1O95521 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PRAMEF1O95521 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
PRAMEF1O95521 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PRAMEF1O95521 AC010733.2-201ENST00000589496 5702 ntBASIC4□□□□□ -1.77
PRAMEF1O95521 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4□□□□□ -1.77
PRAMEF1O95521 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PRAMEF1O95521 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC4□□□□□ -1.77
PRAMEF1O95521 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4□□□□□ -1.77
PRAMEF1O95521 AC233981.2-201ENST00000611524 1614 ntBASIC4□□□□□ -1.77
PRAMEF1O95521 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PRAMEF1O95521 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4□□□□□ -1.77
PRAMEF1O95521 Y_RNA.785-201ENST00000384290 109 ntBASIC4□□□□□ -1.77
PRAMEF1O95521 Y_RNA.539-201ENST00000384635 107 ntBASIC4□□□□□ -1.77
PRAMEF1O95521 MIR325-201ENST00000385260 98 ntBASIC4□□□□□ -1.77
PRAMEF1O95521 RNU6-1197P-201ENST00000391183 107 ntBASIC4□□□□□ -1.77
PRAMEF1O95521 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PRAMEF1O95521 MRPL35P1-201ENST00000404272 572 ntBASIC4□□□□□ -1.77
PRAMEF1O95521 RPL21P65-201ENST00000406094 466 ntBASIC4□□□□□ -1.77
PRAMEF1O95521 RNU2-71P-201ENST00000411395 189 ntBASIC4□□□□□ -1.77
PRAMEF1O95521 TMEM167AP1-201ENST00000423409 219 ntBASIC4□□□□□ -1.77
PRAMEF1O95521 AL691449.1-201ENST00000426570 421 ntBASIC4□□□□□ -1.77
PRAMEF1O95521 MTND5P15-201ENST00000434246 349 ntBASIC4□□□□□ -1.77
PRAMEF1O95521 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4□□□□□ -1.77
PRAMEF1O95521 snoU13.30-201ENST00000458951 104 ntBASIC4□□□□□ -1.77
PRAMEF1O95521 U8.22-201ENST00000459141 133 ntBASIC4□□□□□ -1.77
PRAMEF1O95521 RPL30P5-201ENST00000494923 336 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms