Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC012119.1-201ENST00000603184 222 ntBASIC4.31□□□□□ -1.72
RAPGEF3O95398 AC113139.1-201ENST00000605049 239 ntBASIC4.31□□□□□ -1.72
RAPGEF3O95398 FAM35DP-201ENST00000323387 2712 ntBASIC4.31□□□□□ -1.72
RAPGEF3O95398 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RAPGEF3O95398 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RAPGEF3O95398 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
RAPGEF3O95398 AP001148.1-201ENST00000624124 2359 ntBASIC4.3□□□□□ -1.72
RAPGEF3O95398 RNA5SP295-201ENST00000362655 121 ntBASIC4.3□□□□□ -1.72
RAPGEF3O95398 RNU6-395P-201ENST00000365662 106 ntBASIC4.3□□□□□ -1.72
RAPGEF3O95398 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RAPGEF3O95398 Y_RNA.384-201ENST00000383909 102 ntBASIC4.3□□□□□ -1.72
RAPGEF3O95398 Y_RNA.460-201ENST00000384255 102 ntBASIC4.3□□□□□ -1.72
RAPGEF3O95398 AL138878.1-201ENST00000405131 347 ntBASIC4.3□□□□□ -1.72
RAPGEF3O95398 RPS4XP7-201ENST00000406274 780 ntBASIC4.3□□□□□ -1.72
RAPGEF3O95398 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC4.3□□□□□ -1.72
RAPGEF3O95398 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC4.3□□□□□ -1.72
RAPGEF3O95398 RPL7P5-201ENST00000471472 736 ntBASIC4.3□□□□□ -1.72
RAPGEF3O95398 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.3□□□□□ -1.72
RAPGEF3O95398 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.3□□□□□ -1.72
RAPGEF3O95398 SUMO2P6-201ENST00000505273 288 ntBASIC4.3□□□□□ -1.72
RAPGEF3O95398 RNU1-61P-201ENST00000516107 151 ntBASIC4.3□□□□□ -1.72
RAPGEF3O95398 RNU6-1069P-201ENST00000516612 133 ntBASIC4.3□□□□□ -1.72
RAPGEF3O95398 RNA5SP290-201ENST00000517133 127 ntBASIC4.3□□□□□ -1.72
RAPGEF3O95398 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4.3□□□□□ -1.72
RAPGEF3O95398 AL157871.3-201ENST00000557231 293 ntBASIC4.3□□□□□ -1.72
RAPGEF3O95398 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.3□□□□□ -1.72
RAPGEF3O95398 MIR3942-201ENST00000585264 109 ntBASIC4.3□□□□□ -1.72
RAPGEF3O95398 AC110741.2-201ENST00000605278 268 ntBASIC4.3□□□□□ -1.72
RAPGEF3O95398 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RAPGEF3O95398 AC007785.2-201ENST00000598627 1916 ntBASIC4.3□□□□□ -1.72
RAPGEF3O95398 AC090740.1-201ENST00000623193 2262 ntBASIC4.3□□□□□ -1.72
RAPGEF3O95398 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RAPGEF3O95398 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RAPGEF3O95398 RNU1-89P-201ENST00000384592 164 ntBASIC4.29□□□□□ -1.72
RAPGEF3O95398 MIR450B-201ENST00000401182 78 ntBASIC4.29□□□□□ -1.72
RAPGEF3O95398 MTND1P14-201ENST00000427400 950 ntBASIC4.29□□□□□ -1.72
RAPGEF3O95398 AC007919.1-201ENST00000429380 217 ntBASIC4.29□□□□□ -1.72
RAPGEF3O95398 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC4.29□□□□□ -1.72
RAPGEF3O95398 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.29□□□□□ -1.72
RAPGEF3O95398 AC009901.1-201ENST00000506703 541 ntBASIC4.29□□□□□ -1.72
RAPGEF3O95398 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.29□□□□□ -1.72
RAPGEF3O95398 AC008716.1-201ENST00000511084 513 ntBASIC4.29□□□□□ -1.72
RAPGEF3O95398 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.29□□□□□ -1.72
RAPGEF3O95398 AC084851.1-201ENST00000529105 249 ntBASIC4.29□□□□□ -1.72
RAPGEF3O95398 AC015712.3-201ENST00000559380 164 ntBASIC4.29□□□□□ -1.72
RAPGEF3O95398 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4.29□□□□□ -1.72
RAPGEF3O95398 AC023043.2-201ENST00000589678 1026 ntBASIC4.29□□□□□ -1.72
RAPGEF3O95398 DUSP12P1-201ENST00000612874 516 ntBASIC4.29□□□□□ -1.72
RAPGEF3O95398 AC090574.1-201ENST00000623186 233 ntBASIC4.29□□□□□ -1.72
RAPGEF3O95398 AL133216.2-202ENST00000634512 349 ntBASIC4.29□□□□□ -1.72
RAPGEF3O95398 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RAPGEF3O95398 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
RAPGEF3O95398 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RAPGEF3O95398 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.28□□□□□ -1.72
RAPGEF3O95398 Y_RNA.33-201ENST00000362591 102 ntBASIC4.28□□□□□ -1.72
RAPGEF3O95398 Y_RNA.387-201ENST00000383918 102 ntBASIC4.28□□□□□ -1.72
RAPGEF3O95398 RNU6-128P-201ENST00000383976 107 ntBASIC4.28□□□□□ -1.72
RAPGEF3O95398 Y_RNA.431-201ENST00000384086 102 ntBASIC4.28□□□□□ -1.72
RAPGEF3O95398 MIR578-201ENST00000384828 96 ntBASIC4.28□□□□□ -1.72
RAPGEF3O95398 RNU6-1197P-201ENST00000391183 107 ntBASIC4.28□□□□□ -1.72
RAPGEF3O95398 U3.42-201ENST00000408746 214 ntBASIC4.28□□□□□ -1.72
RAPGEF3O95398 AL139396.1-201ENST00000421137 167 ntBASIC4.28□□□□□ -1.72
RAPGEF3O95398 Z82210.1-201ENST00000440037 231 ntBASIC4.28□□□□□ -1.72
RAPGEF3O95398 AL360271.2-201ENST00000447710 161 ntBASIC4.28□□□□□ -1.72
RAPGEF3O95398 HMGN2P16-201ENST00000456802 261 ntBASIC4.28□□□□□ -1.72
RAPGEF3O95398 RPL23AP62-201ENST00000463396 453 ntBASIC4.28□□□□□ -1.72
RAPGEF3O95398 RPL30P5-201ENST00000494923 336 ntBASIC4.28□□□□□ -1.72
RAPGEF3O95398 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.28□□□□□ -1.72
RAPGEF3O95398 RNU6-566P-201ENST00000516790 107 ntBASIC4.28□□□□□ -1.72
RAPGEF3O95398 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.28□□□□□ -1.72
RAPGEF3O95398 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RAPGEF3O95398 AC093027.1-201ENST00000546698 429 ntBASIC4.28□□□□□ -1.72
RAPGEF3O95398 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.28□□□□□ -1.72
RAPGEF3O95398 MIR3672-201ENST00000584290 82 ntBASIC4.28□□□□□ -1.72
RAPGEF3O95398 MIR5692C1-201ENST00000585309 91 ntBASIC4.28□□□□□ -1.72
RAPGEF3O95398 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC4.28□□□□□ -1.72
RAPGEF3O95398 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
RAPGEF3O95398 AC006026.1-201ENST00000444025 1803 ntBASIC4.28□□□□□ -1.72
RAPGEF3O95398 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.27□□□□□ -1.73
RAPGEF3O95398 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
RAPGEF3O95398 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RAPGEF3O95398 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RAPGEF3O95398 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
RAPGEF3O95398 RNU6-1011P-201ENST00000384668 107 ntBASIC4.27□□□□□ -1.73
RAPGEF3O95398 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
RAPGEF3O95398 MIR1289-2-201ENST00000408360 111 ntBASIC4.27□□□□□ -1.73
RAPGEF3O95398 VN1R36P-201ENST00000414936 291 ntBASIC4.27□□□□□ -1.73
RAPGEF3O95398 PIGFP3-201ENST00000441918 722 ntBASIC4.27□□□□□ -1.73
RAPGEF3O95398 AC233279.1-201ENST00000455300 423 ntBASIC4.27□□□□□ -1.73
RAPGEF3O95398 RPS23P3-201ENST00000470993 430 ntBASIC4.27□□□□□ -1.73
RAPGEF3O95398 HMGB1P30-201ENST00000492455 606 ntBASIC4.27□□□□□ -1.73
RAPGEF3O95398 HMGN1P13-201ENST00000505795 138 ntBASIC4.27□□□□□ -1.73
RAPGEF3O95398 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.27□□□□□ -1.73
RAPGEF3O95398 RPL39P5-202ENST00000512505 151 ntBASIC4.27□□□□□ -1.73
RAPGEF3O95398 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC4.27□□□□□ -1.73
RAPGEF3O95398 AC069113.1-201ENST00000517763 267 ntBASIC4.27□□□□□ -1.73
RAPGEF3O95398 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.27□□□□□ -1.73
RAPGEF3O95398 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.27□□□□□ -1.73
RAPGEF3O95398 MIR4644-201ENST00000579929 84 ntBASIC4.27□□□□□ -1.73
RAPGEF3O95398 LRRC37A5P-203ENST00000580181 585 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms