Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 VN1R82P-201ENST00000601481 356 ntBASIC1.54□□□□□ -2.16
VAPBO95292 AL391001.1-201ENST00000602747 715 ntBASIC1.54□□□□□ -2.16
VAPBO95292 BX248123.2-201ENST00000606318 124 ntBASIC1.54□□□□□ -2.16
VAPBO95292 AC022893.3-201ENST00000607665 437 ntBASIC1.54□□□□□ -2.16
VAPBO95292 AC091965.4-201ENST00000607691 587 ntBASIC1.54□□□□□ -2.16
VAPBO95292 AC006386.1-201ENST00000619436 415 ntBASIC1.54□□□□□ -2.16
VAPBO95292 AL356596.1-201ENST00000624230 379 ntBASIC1.54□□□□□ -2.16
VAPBO95292 AC092192.1-201ENST00000633154 1018 ntBASIC1.54□□□□□ -2.16
VAPBO95292 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
VAPBO95292 SNORD116.1-201ENST00000365628 92 ntBASIC1.53□□□□□ -2.16
VAPBO95292 RNU6-190P-201ENST00000384154 102 ntBASIC1.53□□□□□ -2.16
VAPBO95292 SNORD14D-201ENST00000384390 87 ntBASIC1.53□□□□□ -2.16
VAPBO95292 RNU6-769P-201ENST00000384407 104 ntBASIC1.53□□□□□ -2.16
VAPBO95292 Y_RNA.534-201ENST00000384599 112 ntBASIC1.53□□□□□ -2.16
VAPBO95292 MIR320A-201ENST00000385302 82 ntBASIC1.53□□□□□ -2.16
VAPBO95292 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
VAPBO95292 MIR1304-201ENST00000408243 91 ntBASIC1.53□□□□□ -2.16
VAPBO95292 MIR1261-201ENST00000408659 82 ntBASIC1.53□□□□□ -2.16
VAPBO95292 UBE2V1P10-201ENST00000414685 269 ntBASIC1.53□□□□□ -2.16
VAPBO95292 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
VAPBO95292 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.53□□□□□ -2.16
VAPBO95292 AL022400.1-201ENST00000423946 935 ntBASIC1.53□□□□□ -2.16
VAPBO95292 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.53□□□□□ -2.16
VAPBO95292 UBE2V1P4-201ENST00000425374 344 ntBASIC1.53□□□□□ -2.16
VAPBO95292 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.53□□□□□ -2.16
VAPBO95292 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.53□□□□□ -2.16
VAPBO95292 MTCO2P20-201ENST00000437339 673 ntBASIC1.53□□□□□ -2.16
VAPBO95292 RPL23AP35-201ENST00000451906 501 ntBASIC1.53□□□□□ -2.16
VAPBO95292 AC096745.1-201ENST00000509945 370 ntBASIC1.53□□□□□ -2.16
VAPBO95292 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.53□□□□□ -2.16
VAPBO95292 AP003392.2-201ENST00000527269 208 ntBASIC1.53□□□□□ -2.16
VAPBO95292 AC013828.2-201ENST00000532487 235 ntBASIC1.53□□□□□ -2.16
VAPBO95292 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.53□□□□□ -2.16
VAPBO95292 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.53□□□□□ -2.16
VAPBO95292 MTCYBP23-201ENST00000558717 1102 ntBASIC1.53□□□□□ -2.16
VAPBO95292 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.53□□□□□ -2.16
VAPBO95292 MIR3198-2-201ENST00000577868 80 ntBASIC1.53□□□□□ -2.16
VAPBO95292 MIR4285-201ENST00000581001 85 ntBASIC1.53□□□□□ -2.16
VAPBO95292 MIR544B-201ENST00000582372 78 ntBASIC1.53□□□□□ -2.16
VAPBO95292 AL158827.2-201ENST00000602494 330 ntBASIC1.53□□□□□ -2.16
VAPBO95292 CYP2C61P-201ENST00000604072 290 ntBASIC1.53□□□□□ -2.16
VAPBO95292 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.53□□□□□ -2.16
VAPBO95292 AL355472.4-201ENST00000610233 626 ntBASIC1.53□□□□□ -2.16
VAPBO95292 AL359314.1-201ENST00000616913 261 ntBASIC1.53□□□□□ -2.16
VAPBO95292 AL691447.3-201ENST00000635020 330 ntBASIC1.53□□□□□ -2.16
VAPBO95292 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.53□□□□□ -2.16
VAPBO95292 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.53□□□□□ -2.16
VAPBO95292 AC002543.1-201ENST00000299783 1954 ntBASIC1.52□□□□□ -2.17
VAPBO95292 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
VAPBO95292 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.52□□□□□ -2.17
VAPBO95292 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.52□□□□□ -2.17
VAPBO95292 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
VAPBO95292 RNU6-655P-201ENST00000362858 107 ntBASIC1.52□□□□□ -2.17
VAPBO95292 RNA5SP190-201ENST00000365222 118 ntBASIC1.52□□□□□ -2.17
VAPBO95292 SNORA4.3-201ENST00000365564 137 ntBASIC1.52□□□□□ -2.17
VAPBO95292 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC1.52□□□□□ -2.17
VAPBO95292 MIR1323-201ENST00000408090 73 ntBASIC1.52□□□□□ -2.17
VAPBO95292 MIR1283-2-201ENST00000408621 87 ntBASIC1.52□□□□□ -2.17
VAPBO95292 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.52□□□□□ -2.17
VAPBO95292 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC1.52□□□□□ -2.17
VAPBO95292 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.52□□□□□ -2.17
VAPBO95292 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.52□□□□□ -2.17
VAPBO95292 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.52□□□□□ -2.17
VAPBO95292 PRELID3BP1-201ENST00000457142 540 ntBASIC1.52□□□□□ -2.17
VAPBO95292 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.52□□□□□ -2.17
VAPBO95292 HMGB1P30-201ENST00000492455 606 ntBASIC1.52□□□□□ -2.17
VAPBO95292 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.52□□□□□ -2.17
VAPBO95292 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.52□□□□□ -2.17
VAPBO95292 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC1.52□□□□□ -2.17
VAPBO95292 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.52□□□□□ -2.17
VAPBO95292 AP004247.1-201ENST00000531556 1289 ntBASIC1.52□□□□□ -2.17
VAPBO95292 AC027807.1-201ENST00000559921 996 ntBASIC1.52□□□□□ -2.17
VAPBO95292 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.52□□□□□ -2.17
VAPBO95292 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.52□□□□□ -2.17
VAPBO95292 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.52□□□□□ -2.17
VAPBO95292 AC012065.4-201ENST00000602445 679 ntBASIC1.52□□□□□ -2.17
VAPBO95292 AC004908.3-201ENST00000610248 625 ntBASIC1.52□□□□□ -2.17
VAPBO95292 AC130324.3-201ENST00000614165 542 ntBASIC1.52□□□□□ -2.17
VAPBO95292 HAUS6P2-201ENST00000433254 2404 ntBASIC1.51□□□□□ -2.17
VAPBO95292 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.51□□□□□ -2.17
VAPBO95292 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.51□□□□□ -2.17
VAPBO95292 U8.3-201ENST00000363321 132 ntBASIC1.51□□□□□ -2.17
VAPBO95292 RNU6-529P-201ENST00000363383 104 ntBASIC1.51□□□□□ -2.17
VAPBO95292 RNY3P13-201ENST00000365542 102 ntBASIC1.51□□□□□ -2.17
VAPBO95292 RNU6-843P-201ENST00000384454 104 ntBASIC1.51□□□□□ -2.17
VAPBO95292 RNU6-1274P-201ENST00000384557 107 ntBASIC1.51□□□□□ -2.17
VAPBO95292 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
VAPBO95292 MIR934-201ENST00000401241 83 ntBASIC1.51□□□□□ -2.17
VAPBO95292 OR9R1P-201ENST00000412200 877 ntBASIC1.51□□□□□ -2.17
VAPBO95292 AC019070.1-201ENST00000415008 1024 ntBASIC1.51□□□□□ -2.17
VAPBO95292 AC016831.2-201ENST00000417179 352 ntBASIC1.51□□□□□ -2.17
VAPBO95292 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.51□□□□□ -2.17
VAPBO95292 AC104982.1-201ENST00000478775 574 ntBASIC1.51□□□□□ -2.17
VAPBO95292 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
VAPBO95292 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.51□□□□□ -2.17
VAPBO95292 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.51□□□□□ -2.17
VAPBO95292 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.51□□□□□ -2.17
VAPBO95292 AC023813.2-201ENST00000564321 469 ntBASIC1.51□□□□□ -2.17
VAPBO95292 AC092325.1-201ENST00000566449 554 ntBASIC1.51□□□□□ -2.17
VAPBO95292 AC022254.1-201ENST00000567857 235 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms