Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 RAP1BP3-201ENST00000407180 549 ntBASIC2.99□□□□□ -1.93
RTN3O95197 RNU2-3P-201ENST00000410144 191 ntBASIC2.99□□□□□ -1.93
RTN3O95197 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.99□□□□□ -1.93
RTN3O95197 AC087499.2-201ENST00000432861 149 ntBASIC2.99□□□□□ -1.93
RTN3O95197 RPL7P54-201ENST00000438336 674 ntBASIC2.99□□□□□ -1.93
RTN3O95197 AC016691.1-201ENST00000441321 413 ntBASIC2.99□□□□□ -1.93
RTN3O95197 HIGD1AP2-201ENST00000446367 280 ntBASIC2.99□□□□□ -1.93
RTN3O95197 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.99□□□□□ -1.93
RTN3O95197 RPL23AP70-201ENST00000483361 460 ntBASIC2.99□□□□□ -1.93
RTN3O95197 AC091435.1-201ENST00000505442 584 ntBASIC2.99□□□□□ -1.93
RTN3O95197 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
RTN3O95197 MTCO3P9-201ENST00000506989 781 ntBASIC2.99□□□□□ -1.93
RTN3O95197 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.99□□□□□ -1.93
RTN3O95197 AC104383.1-201ENST00000530297 370 ntBASIC2.99□□□□□ -1.93
RTN3O95197 GTF3AP2-201ENST00000557014 266 ntBASIC2.99□□□□□ -1.93
RTN3O95197 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.99□□□□□ -1.93
RTN3O95197 AC138761.3-201ENST00000579993 334 ntBASIC2.99□□□□□ -1.93
RTN3O95197 MIR3670-2-201ENST00000582974 65 ntBASIC2.99□□□□□ -1.93
RTN3O95197 MIR3670-1-201ENST00000584160 65 ntBASIC2.99□□□□□ -1.93
RTN3O95197 MIR3670-3-201ENST00000584855 65 ntBASIC2.99□□□□□ -1.93
RTN3O95197 MIR3670-4-201ENST00000612260 65 ntBASIC2.99□□□□□ -1.93
RTN3O95197 AC011890.2-201ENST00000613393 294 ntBASIC2.99□□□□□ -1.93
RTN3O95197 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.99□□□□□ -1.93
RTN3O95197 AC068792.1-201ENST00000621354 417 ntBASIC2.99□□□□□ -1.93
RTN3O95197 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.99□□□□□ -1.93
RTN3O95197 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
RTN3O95197 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.99□□□□□ -1.93
RTN3O95197 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.99□□□□□ -1.93
RTN3O95197 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.98□□□□□ -1.93
RTN3O95197 Y_RNA.41-201ENST00000362646 102 ntBASIC2.98□□□□□ -1.93
RTN3O95197 SNORA5B-201ENST00000363786 132 ntBASIC2.98□□□□□ -1.93
RTN3O95197 SNORD56.5-201ENST00000364281 72 ntBASIC2.98□□□□□ -1.93
RTN3O95197 RNU6-1180P-201ENST00000364935 107 ntBASIC2.98□□□□□ -1.93
RTN3O95197 SET-203ENST00000372688 801 ntTSL 2 BASIC2.98□□□□□ -1.93
RTN3O95197 MIR512-1-201ENST00000384913 84 ntBASIC2.98□□□□□ -1.93
RTN3O95197 SNORD70.1-201ENST00000391007 85 ntBASIC2.98□□□□□ -1.93
RTN3O95197 FO393413.1-201ENST00000402892 195 ntBASIC2.98□□□□□ -1.93
RTN3O95197 FTH1P15-201ENST00000406984 280 ntBASIC2.98□□□□□ -1.93
RTN3O95197 RN7SKP284-201ENST00000411002 343 ntBASIC2.98□□□□□ -1.93
RTN3O95197 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.98□□□□□ -1.93
RTN3O95197 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.98□□□□□ -1.93
RTN3O95197 FDX1P2-201ENST00000450769 375 ntBASIC2.98□□□□□ -1.93
RTN3O95197 CACYBPP2-201ENST00000453625 678 ntBASIC2.98□□□□□ -1.93
RTN3O95197 AP000705.1-201ENST00000454567 350 ntBASIC2.98□□□□□ -1.93
RTN3O95197 SCARNA18-201ENST00000459004 134 ntBASIC2.98□□□□□ -1.93
RTN3O95197 snoU109.2-201ENST00000459316 135 ntBASIC2.98□□□□□ -1.93
RTN3O95197 RNU6-261P-201ENST00000459506 102 ntBASIC2.98□□□□□ -1.93
RTN3O95197 AC083798.1-201ENST00000472671 131 ntBASIC2.98□□□□□ -1.93
RTN3O95197 MRPL42P6-201ENST00000486397 371 ntBASIC2.98□□□□□ -1.93
RTN3O95197 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.98□□□□□ -1.93
RTN3O95197 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.98□□□□□ -1.93
RTN3O95197 BTF3P12-201ENST00000519620 469 ntBASIC2.98□□□□□ -1.93
RTN3O95197 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.98□□□□□ -1.93
RTN3O95197 ELOCP31-201ENST00000540463 467 ntBASIC2.98□□□□□ -1.93
RTN3O95197 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.98□□□□□ -1.93
RTN3O95197 AL670379.10-201ENST00000604330 253 ntBASIC2.98□□□□□ -1.93
RTN3O95197 AC007621.1-201ENST00000604544 437 ntBASIC2.98□□□□□ -1.93
RTN3O95197 AL670379.9-201ENST00000605428 253 ntBASIC2.98□□□□□ -1.93
RTN3O95197 AC010378.1-201ENST00000619270 362 ntBASIC2.98□□□□□ -1.93
RTN3O95197 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.98□□□□□ -1.93
RTN3O95197 CR381653.2-201ENST00000624041 768 ntBASIC2.98□□□□□ -1.93
RTN3O95197 AC022418.1-201ENST00000624118 445 ntBASIC2.98□□□□□ -1.93
RTN3O95197 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
RTN3O95197 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.97□□□□□ -1.93
RTN3O95197 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.97□□□□□ -1.93
RTN3O95197 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.97□□□□□ -1.93
RTN3O95197 AL354685.2-201ENST00000448218 1447 ntBASIC2.97□□□□□ -1.93
RTN3O95197 RNU1-35P-201ENST00000362782 153 ntBASIC2.97□□□□□ -1.93
RTN3O95197 RNU6-301P-201ENST00000384277 107 ntBASIC2.97□□□□□ -1.93
RTN3O95197 CALM2P3-201ENST00000400429 449 ntBASIC2.97□□□□□ -1.93
RTN3O95197 PGBD4P6-201ENST00000421501 610 ntBASIC2.97□□□□□ -1.93
RTN3O95197 MTND3P21-201ENST00000433774 331 ntBASIC2.97□□□□□ -1.93
RTN3O95197 AC004383.1-201ENST00000438135 289 ntBASIC2.97□□□□□ -1.93
RTN3O95197 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.97□□□□□ -1.93
RTN3O95197 AC006026.2-201ENST00000457376 180 ntBASIC2.97□□□□□ -1.93
RTN3O95197 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.97□□□□□ -1.93
RTN3O95197 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.97□□□□□ -1.93
RTN3O95197 AP001324.2-201ENST00000461163 319 ntBASIC2.97□□□□□ -1.93
RTN3O95197 AC114781.4-201ENST00000513707 639 ntBASIC2.97□□□□□ -1.93
RTN3O95197 Y_RNA.687-201ENST00000516558 91 ntBASIC2.97□□□□□ -1.93
RTN3O95197 SNORA31.18-201ENST00000517043 134 ntBASIC2.97□□□□□ -1.93
RTN3O95197 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.97□□□□□ -1.93
RTN3O95197 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.97□□□□□ -1.93
RTN3O95197 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.97□□□□□ -1.93
RTN3O95197 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
RTN3O95197 BNIP3P6-201ENST00000549284 499 ntBASIC2.97□□□□□ -1.93
RTN3O95197 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.97□□□□□ -1.93
RTN3O95197 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.97□□□□□ -1.93
RTN3O95197 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.97□□□□□ -1.93
RTN3O95197 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.97□□□□□ -1.93
RTN3O95197 MIR3616-201ENST00000584070 92 ntBASIC2.97□□□□□ -1.93
RTN3O95197 BNIP3P30-201ENST00000601184 574 ntBASIC2.97□□□□□ -1.93
RTN3O95197 NRBF2P5-201ENST00000603087 788 ntBASIC2.97□□□□□ -1.93
RTN3O95197 RPL12P50-201ENST00000603116 116 ntBASIC2.97□□□□□ -1.93
RTN3O95197 AC010338.1-201ENST00000621823 717 ntBASIC2.97□□□□□ -1.93
RTN3O95197 AL031601.2-202ENST00000622650 282 ntBASIC2.97□□□□□ -1.93
RTN3O95197 AC139792.2-201ENST00000624218 587 ntBASIC2.97□□□□□ -1.93
RTN3O95197 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.97□□□□□ -1.93
RTN3O95197 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
RTN3O95197 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms