Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 AC098614.3-201ENST00000438957 440 ntBASIC3.61□□□□□ -1.83
CTNND1O60716 RPL7P12-201ENST00000446719 750 ntBASIC3.61□□□□□ -1.83
CTNND1O60716 AC125238.1-201ENST00000448842 249 ntBASIC3.61□□□□□ -1.83
CTNND1O60716 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.61□□□□□ -1.83
CTNND1O60716 BTF3P15-201ENST00000455606 336 ntBASIC3.61□□□□□ -1.83
CTNND1O60716 RPS27P29-201ENST00000463110 252 ntBASIC3.61□□□□□ -1.83
CTNND1O60716 AC087884.1-201ENST00000469738 328 ntBASIC3.61□□□□□ -1.83
CTNND1O60716 AC046134.1-201ENST00000514454 666 ntBASIC3.61□□□□□ -1.83
CTNND1O60716 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.61□□□□□ -1.83
CTNND1O60716 AC107953.1-201ENST00000522216 297 ntBASIC3.61□□□□□ -1.83
CTNND1O60716 AC021739.1-201ENST00000559631 174 ntBASIC3.61□□□□□ -1.83
CTNND1O60716 AC005730.3-201ENST00000583067 366 ntBASIC3.61□□□□□ -1.83
CTNND1O60716 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.61□□□□□ -1.83
CTNND1O60716 AC022306.2-201ENST00000617563 647 ntBASIC3.61□□□□□ -1.83
CTNND1O60716 MIR6134-201ENST00000617606 109 ntBASIC3.61□□□□□ -1.83
CTNND1O60716 AC009248.2-201ENST00000619826 254 ntBASIC3.61□□□□□ -1.83
CTNND1O60716 AL008636.1-201ENST00000625038 1018 ntBASIC3.61□□□□□ -1.83
CTNND1O60716 AC110774.1-201ENST00000623567 2018 ntBASIC3.61□□□□□ -1.83
CTNND1O60716 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CTNND1O60716 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CTNND1O60716 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CTNND1O60716 RNU6-254P-201ENST00000363377 107 ntBASIC3.6□□□□□ -1.83
CTNND1O60716 Y_RNA.414-201ENST00000384011 101 ntBASIC3.6□□□□□ -1.83
CTNND1O60716 RNU1-101P-201ENST00000391171 127 ntBASIC3.6□□□□□ -1.83
CTNND1O60716 AC022018.1-201ENST00000430685 241 ntBASIC3.6□□□□□ -1.83
CTNND1O60716 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.6□□□□□ -1.83
CTNND1O60716 IFNA20P-201ENST00000436840 528 ntBASIC3.6□□□□□ -1.83
CTNND1O60716 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.6□□□□□ -1.83
CTNND1O60716 HMGN2P10-201ENST00000448085 265 ntBASIC3.6□□□□□ -1.83
CTNND1O60716 HMGN1P18-201ENST00000457642 277 ntBASIC3.6□□□□□ -1.83
CTNND1O60716 AC117503.1-201ENST00000472241 394 ntBASIC3.6□□□□□ -1.83
CTNND1O60716 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.6□□□□□ -1.83
CTNND1O60716 IGHV3-76-201ENST00000522465 295 ntBASIC3.6□□□□□ -1.83
CTNND1O60716 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.6□□□□□ -1.83
CTNND1O60716 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.6□□□□□ -1.83
CTNND1O60716 MIR5692C1-201ENST00000585309 91 ntBASIC3.6□□□□□ -1.83
CTNND1O60716 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.6□□□□□ -1.83
CTNND1O60716 AC092794.2-201ENST00000620933 563 ntBASIC3.6□□□□□ -1.83
CTNND1O60716 AC091903.1-201ENST00000624322 454 ntBASIC3.6□□□□□ -1.83
CTNND1O60716 MIR3199-2-201ENST00000636243 86 ntBASIC3.6□□□□□ -1.83
CTNND1O60716 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CTNND1O60716 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CTNND1O60716 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
CTNND1O60716 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
CTNND1O60716 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.59□□□□□ -1.83
CTNND1O60716 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.59□□□□□ -1.83
CTNND1O60716 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.59□□□□□ -1.83
CTNND1O60716 RNU6-898P-201ENST00000365627 104 ntBASIC3.59□□□□□ -1.83
CTNND1O60716 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
CTNND1O60716 RNU6-831P-201ENST00000384548 107 ntBASIC3.59□□□□□ -1.83
CTNND1O60716 MIR518D-201ENST00000385014 87 ntBASIC3.59□□□□□ -1.83
CTNND1O60716 MIR450B-201ENST00000401182 78 ntBASIC3.59□□□□□ -1.83
CTNND1O60716 AC023141.4-201ENST00000412031 328 ntBASIC3.59□□□□□ -1.83
CTNND1O60716 AC245291.1-201ENST00000419501 328 ntBASIC3.59□□□□□ -1.83
CTNND1O60716 MTCO3P46-201ENST00000425787 232 ntBASIC3.59□□□□□ -1.83
CTNND1O60716 AL365496.1-201ENST00000426885 215 ntBASIC3.59□□□□□ -1.83
CTNND1O60716 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.59□□□□□ -1.83
CTNND1O60716 MTND5P20-201ENST00000448677 143 ntBASIC3.59□□□□□ -1.83
CTNND1O60716 snoU109.2-201ENST00000459316 135 ntBASIC3.59□□□□□ -1.83
CTNND1O60716 RNU7-66P-201ENST00000459469 62 ntBASIC3.59□□□□□ -1.83
CTNND1O60716 RPS29P26-201ENST00000477483 171 ntBASIC3.59□□□□□ -1.83
CTNND1O60716 TRBVA-201ENST00000498804 316 ntBASIC3.59□□□□□ -1.83
CTNND1O60716 HMGN1P12-201ENST00000499125 195 ntBASIC3.59□□□□□ -1.83
CTNND1O60716 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.59□□□□□ -1.83
CTNND1O60716 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.59□□□□□ -1.83
CTNND1O60716 AC087854.1-201ENST00000519706 414 ntBASIC3.59□□□□□ -1.83
CTNND1O60716 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CTNND1O60716 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.59□□□□□ -1.83
CTNND1O60716 NUTF2P8-201ENST00000604593 363 ntBASIC3.59□□□□□ -1.83
CTNND1O60716 APOOP1-201ENST00000604695 592 ntBASIC3.59□□□□□ -1.83
CTNND1O60716 AL357078.3-201ENST00000607528 618 ntBASIC3.59□□□□□ -1.83
CTNND1O60716 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.59□□□□□ -1.83
CTNND1O60716 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CTNND1O60716 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.59□□□□□ -1.83
CTNND1O60716 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CTNND1O60716 AC007496.3-201ENST00000624987 3443 ntBASIC3.59□□□□□ -1.83
CTNND1O60716 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.59□□□□□ -1.84
CTNND1O60716 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.58□□□□□ -1.84
CTNND1O60716 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.58□□□□□ -1.84
CTNND1O60716 RNU6-845P-201ENST00000362578 103 ntBASIC3.58□□□□□ -1.84
CTNND1O60716 U3.37-201ENST00000408528 213 ntBASIC3.58□□□□□ -1.84
CTNND1O60716 AC016831.2-201ENST00000417179 352 ntBASIC3.58□□□□□ -1.84
CTNND1O60716 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.58□□□□□ -1.84
CTNND1O60716 AL139281.1-201ENST00000422120 335 ntBASIC3.58□□□□□ -1.84
CTNND1O60716 RPL23AP22-201ENST00000437556 453 ntBASIC3.58□□□□□ -1.84
CTNND1O60716 AC233279.1-201ENST00000455300 423 ntBASIC3.58□□□□□ -1.84
CTNND1O60716 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.58□□□□□ -1.84
CTNND1O60716 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.58□□□□□ -1.84
CTNND1O60716 RNA5SP356-201ENST00000515972 94 ntBASIC3.58□□□□□ -1.84
CTNND1O60716 RNU4-49P-201ENST00000516080 140 ntBASIC3.58□□□□□ -1.84
CTNND1O60716 SNORA64.4-201ENST00000516632 81 ntBASIC3.58□□□□□ -1.84
CTNND1O60716 RNU6-323P-201ENST00000521915 107 ntBASIC3.58□□□□□ -1.84
CTNND1O60716 AC087241.2-201ENST00000535801 324 ntBASIC3.58□□□□□ -1.84
CTNND1O60716 AC243972.3-201ENST00000539655 198 ntBASIC3.58□□□□□ -1.84
CTNND1O60716 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.58□□□□□ -1.84
CTNND1O60716 GTF3AP2-201ENST00000557014 266 ntBASIC3.58□□□□□ -1.84
CTNND1O60716 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CTNND1O60716 ELOCP29-201ENST00000588193 334 ntBASIC3.58□□□□□ -1.84
CTNND1O60716 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CTNND1O60716 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms