Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
PCDHGA12O60330 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
PCDHGA12O60330 RNU6-78P-201ENST00000362897 107 ntBASIC3.59□□□□□ -1.83
PCDHGA12O60330 Y_RNA.111-201ENST00000363248 100 ntBASIC3.59□□□□□ -1.83
PCDHGA12O60330 RNU6-827P-201ENST00000365553 106 ntBASIC3.59□□□□□ -1.83
PCDHGA12O60330 RNA5SP252-201ENST00000391131 119 ntBASIC3.59□□□□□ -1.83
PCDHGA12O60330 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.83
PCDHGA12O60330 AC096649.2-201ENST00000416186 393 ntBASIC3.59□□□□□ -1.83
PCDHGA12O60330 AL117339.3-201ENST00000418733 162 ntBASIC3.59□□□□□ -1.83
PCDHGA12O60330 AL590632.1-201ENST00000424289 371 ntBASIC3.59□□□□□ -1.83
PCDHGA12O60330 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDHGA12O60330 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.59□□□□□ -1.83
PCDHGA12O60330 RPS15AP5-201ENST00000436276 388 ntBASIC3.59□□□□□ -1.83
PCDHGA12O60330 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDHGA12O60330 HIGD1AP11-201ENST00000438361 280 ntBASIC3.59□□□□□ -1.83
PCDHGA12O60330 AL441985.1-201ENST00000457727 251 ntBASIC3.59□□□□□ -1.83
PCDHGA12O60330 SNORD19B-201ENST00000459623 84 ntBASIC3.59□□□□□ -1.83
PCDHGA12O60330 MTND4P17-201ENST00000470444 350 ntBASIC3.59□□□□□ -1.83
PCDHGA12O60330 RPS29P2-201ENST00000479278 136 ntBASIC3.59□□□□□ -1.83
PCDHGA12O60330 AC116655.1-201ENST00000508324 901 ntBASIC3.59□□□□□ -1.83
PCDHGA12O60330 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.59□□□□□ -1.83
PCDHGA12O60330 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDHGA12O60330 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.59□□□□□ -1.83
PCDHGA12O60330 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDHGA12O60330 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.59□□□□□ -1.83
PCDHGA12O60330 AL137849.1-201ENST00000604767 169 ntBASIC3.59□□□□□ -1.83
PCDHGA12O60330 AL161423.1-201ENST00000613700 262 ntBASIC3.59□□□□□ -1.83
PCDHGA12O60330 XIST_intron.1-201ENST00000619444 68 ntBASIC3.59□□□□□ -1.83
PCDHGA12O60330 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.59□□□□□ -1.83
PCDHGA12O60330 AL021368.2-201ENST00000606125 5352 ntBASIC3.59□□□□□ -1.83
PCDHGA12O60330 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.59□□□□□ -1.84
PCDHGA12O60330 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
PCDHGA12O60330 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
PCDHGA12O60330 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.58□□□□□ -1.84
PCDHGA12O60330 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.58□□□□□ -1.84
PCDHGA12O60330 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.58□□□□□ -1.84
PCDHGA12O60330 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PCDHGA12O60330 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PCDHGA12O60330 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.58□□□□□ -1.84
PCDHGA12O60330 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PCDHGA12O60330 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
PCDHGA12O60330 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PCDHGA12O60330 Y_RNA.259-201ENST00000364619 101 ntBASIC3.58□□□□□ -1.84
PCDHGA12O60330 SNORA14A-201ENST00000364773 135 ntBASIC3.58□□□□□ -1.84
PCDHGA12O60330 RNU1-100P-201ENST00000365255 165 ntBASIC3.58□□□□□ -1.84
PCDHGA12O60330 RNU6-1245P-201ENST00000411130 106 ntBASIC3.58□□□□□ -1.84
PCDHGA12O60330 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.58□□□□□ -1.84
PCDHGA12O60330 Z99755.1-201ENST00000414048 380 ntBASIC3.58□□□□□ -1.84
PCDHGA12O60330 AL159169.1-201ENST00000421119 127 ntBASIC3.58□□□□□ -1.84
PCDHGA12O60330 AC005300.1-201ENST00000428401 373 ntBASIC3.58□□□□□ -1.84
PCDHGA12O60330 AL591043.1-201ENST00000432461 424 ntBASIC3.58□□□□□ -1.84
PCDHGA12O60330 U3.44-201ENST00000458938 192 ntBASIC3.58□□□□□ -1.84
PCDHGA12O60330 RNU6-307P-201ENST00000516743 106 ntBASIC3.58□□□□□ -1.84
PCDHGA12O60330 Y_RNA.708-201ENST00000516950 96 ntBASIC3.58□□□□□ -1.84
PCDHGA12O60330 AC006199.1-201ENST00000548728 219 ntBASIC3.58□□□□□ -1.84
PCDHGA12O60330 AL121917.1-203ENST00000605534 577 ntBASIC3.58□□□□□ -1.84
PCDHGA12O60330 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PCDHGA12O60330 AC098657.3-201ENST00000620434 263 ntBASIC3.58□□□□□ -1.84
PCDHGA12O60330 MIR3529-201ENST00000637713 78 ntBASIC3.58□□□□□ -1.84
PCDHGA12O60330 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PCDHGA12O60330 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
PCDHGA12O60330 AC008669.1-201ENST00000565823 2178 ntBASIC3.58□□□□□ -1.84
PCDHGA12O60330 HAUS6P2-201ENST00000433254 2404 ntBASIC3.58□□□□□ -1.84
PCDHGA12O60330 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PCDHGA12O60330 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
PCDHGA12O60330 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
PCDHGA12O60330 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
PCDHGA12O60330 RPL9P7-201ENST00000330965 580 ntBASIC3.57□□□□□ -1.84
PCDHGA12O60330 Y_RNA.58-201ENST00000362807 102 ntBASIC3.57□□□□□ -1.84
PCDHGA12O60330 RNU6-527P-201ENST00000363425 104 ntBASIC3.57□□□□□ -1.84
PCDHGA12O60330 Y_RNA.154-201ENST00000363624 102 ntBASIC3.57□□□□□ -1.84
PCDHGA12O60330 RNU6-694P-201ENST00000364071 147 ntBASIC3.57□□□□□ -1.84
PCDHGA12O60330 RNY3P1-201ENST00000365085 102 ntBASIC3.57□□□□□ -1.84
PCDHGA12O60330 RNY3-201ENST00000365484 102 ntBASIC3.57□□□□□ -1.84
PCDHGA12O60330 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PCDHGA12O60330 Y_RNA.490-201ENST00000384413 102 ntBASIC3.57□□□□□ -1.84
PCDHGA12O60330 RNU6-790P-201ENST00000384479 105 ntBASIC3.57□□□□□ -1.84
PCDHGA12O60330 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PCDHGA12O60330 RPS29P13-201ENST00000402041 169 ntBASIC3.57□□□□□ -1.84
PCDHGA12O60330 RNA5SP120-201ENST00000410900 112 ntBASIC3.57□□□□□ -1.84
PCDHGA12O60330 RNU6-370P-201ENST00000411008 104 ntBASIC3.57□□□□□ -1.84
PCDHGA12O60330 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.57□□□□□ -1.84
PCDHGA12O60330 AL513043.1-201ENST00000439124 535 ntBASIC3.57□□□□□ -1.84
PCDHGA12O60330 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.57□□□□□ -1.84
PCDHGA12O60330 AL031183.1-201ENST00000457667 207 ntBASIC3.57□□□□□ -1.84
PCDHGA12O60330 SNORD5.1-201ENST00000458800 75 ntBASIC3.57□□□□□ -1.84
PCDHGA12O60330 AC008155.2-201ENST00000464337 397 ntBASIC3.57□□□□□ -1.84
PCDHGA12O60330 RPL9P9-202ENST00000466501 579 ntBASIC3.57□□□□□ -1.84
PCDHGA12O60330 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.57□□□□□ -1.84
PCDHGA12O60330 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.57□□□□□ -1.84
PCDHGA12O60330 TRBV12-2-201ENST00000489763 344 ntBASIC3.57□□□□□ -1.84
PCDHGA12O60330 AC018437.1-201ENST00000492214 406 ntBASIC3.57□□□□□ -1.84
PCDHGA12O60330 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.57□□□□□ -1.84
PCDHGA12O60330 RPL23AP49-201ENST00000492925 468 ntBASIC3.57□□□□□ -1.84
PCDHGA12O60330 MTCYBP40-201ENST00000509390 1135 ntBASIC3.57□□□□□ -1.84
PCDHGA12O60330 RN7SKP83-201ENST00000516512 178 ntBASIC3.57□□□□□ -1.84
PCDHGA12O60330 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.57□□□□□ -1.84
PCDHGA12O60330 AC005476.1-201ENST00000554427 397 ntBASIC3.57□□□□□ -1.84
PCDHGA12O60330 AL121821.2-201ENST00000556081 394 ntBASIC3.57□□□□□ -1.84
PCDHGA12O60330 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms