Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.03□□□□□ -1.92
LDB2O43679 AL031601.2-202ENST00000622650 282 ntBASIC3.03□□□□□ -1.92
LDB2O43679 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
LDB2O43679 AL035425.3-201ENST00000564206 4996 ntBASIC3.03□□□□□ -1.92
LDB2O43679 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.03□□□□□ -1.92
LDB2O43679 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.03□□□□□ -1.93
LDB2O43679 AC022336.2-201ENST00000568966 2538 ntBASIC3.02□□□□□ -1.93
LDB2O43679 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
LDB2O43679 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
LDB2O43679 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
LDB2O43679 Y_RNA.135-201ENST00000363439 95 ntBASIC3.02□□□□□ -1.93
LDB2O43679 MIR325-201ENST00000385260 98 ntBASIC3.02□□□□□ -1.93
LDB2O43679 UBE2D3P2-201ENST00000424409 445 ntBASIC3.02□□□□□ -1.93
LDB2O43679 MYL8P-204ENST00000431574 518 ntBASIC3.02□□□□□ -1.93
LDB2O43679 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.02□□□□□ -1.93
LDB2O43679 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.02□□□□□ -1.93
LDB2O43679 AC233279.1-201ENST00000455300 423 ntBASIC3.02□□□□□ -1.93
LDB2O43679 RPL27AP5-201ENST00000469428 449 ntBASIC3.02□□□□□ -1.93
LDB2O43679 AC087884.1-201ENST00000469738 328 ntBASIC3.02□□□□□ -1.93
LDB2O43679 RPS23P3-201ENST00000470993 430 ntBASIC3.02□□□□□ -1.93
LDB2O43679 AC117440.1-201ENST00000474107 571 ntBASIC3.02□□□□□ -1.93
LDB2O43679 HMGN2P13-201ENST00000476476 274 ntBASIC3.02□□□□□ -1.93
LDB2O43679 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.02□□□□□ -1.93
LDB2O43679 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.02□□□□□ -1.93
LDB2O43679 Y_RNA.682-201ENST00000516457 100 ntBASIC3.02□□□□□ -1.93
LDB2O43679 RNU6-1282P-201ENST00000516735 96 ntBASIC3.02□□□□□ -1.93
LDB2O43679 RNU6-566P-201ENST00000516790 107 ntBASIC3.02□□□□□ -1.93
LDB2O43679 SNORA25.17-201ENST00000517184 124 ntBASIC3.02□□□□□ -1.93
LDB2O43679 AC069113.1-201ENST00000517763 267 ntBASIC3.02□□□□□ -1.93
LDB2O43679 AC087854.1-201ENST00000519706 414 ntBASIC3.02□□□□□ -1.93
LDB2O43679 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.02□□□□□ -1.93
LDB2O43679 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.02□□□□□ -1.93
LDB2O43679 AL356055.1-201ENST00000602528 446 ntBASIC3.02□□□□□ -1.93
LDB2O43679 AC113139.1-201ENST00000605049 239 ntBASIC3.02□□□□□ -1.93
LDB2O43679 AL138726.1-201ENST00000614873 333 ntBASIC3.02□□□□□ -1.93
LDB2O43679 RMST_4.1-201ENST00000616886 107 ntBASIC3.02□□□□□ -1.93
LDB2O43679 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.02□□□□□ -1.93
LDB2O43679 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.02□□□□□ -1.93
LDB2O43679 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
LDB2O43679 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
LDB2O43679 AC006026.1-201ENST00000444025 1803 ntBASIC3.01□□□□□ -1.93
LDB2O43679 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
LDB2O43679 MIR412-201ENST00000362142 91 ntBASIC3.01□□□□□ -1.93
LDB2O43679 Y_RNA.339-201ENST00000365325 102 ntBASIC3.01□□□□□ -1.93
LDB2O43679 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
LDB2O43679 Y_RNA.384-201ENST00000383909 102 ntBASIC3.01□□□□□ -1.93
LDB2O43679 RNU6-128P-201ENST00000383976 107 ntBASIC3.01□□□□□ -1.93
LDB2O43679 SNORA75B-201ENST00000384053 137 ntBASIC3.01□□□□□ -1.93
LDB2O43679 Y_RNA.460-201ENST00000384255 102 ntBASIC3.01□□□□□ -1.93
LDB2O43679 AL138885.1-201ENST00000405921 675 ntBASIC3.01□□□□□ -1.93
LDB2O43679 MIR548K-201ENST00000408406 116 ntBASIC3.01□□□□□ -1.93
LDB2O43679 RNU2-3P-201ENST00000410144 191 ntBASIC3.01□□□□□ -1.93
LDB2O43679 RNU2-68P-201ENST00000410878 191 ntBASIC3.01□□□□□ -1.93
LDB2O43679 AL139396.1-201ENST00000421137 167 ntBASIC3.01□□□□□ -1.93
LDB2O43679 AC092573.2-201ENST00000434546 243 ntBASIC3.01□□□□□ -1.93
LDB2O43679 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.01□□□□□ -1.93
LDB2O43679 AC107399.1-201ENST00000451226 265 ntBASIC3.01□□□□□ -1.93
LDB2O43679 RN7SL633P-201ENST00000488974 297 ntBASIC3.01□□□□□ -1.93
LDB2O43679 RPL39P5-202ENST00000512505 151 ntBASIC3.01□□□□□ -1.93
LDB2O43679 RNA5SP165-201ENST00000517142 115 ntBASIC3.01□□□□□ -1.93
LDB2O43679 RNA5SP454-201ENST00000517231 127 ntBASIC3.01□□□□□ -1.93
LDB2O43679 AC009902.1-201ENST00000519351 183 ntBASIC3.01□□□□□ -1.93
LDB2O43679 RNU6-323P-201ENST00000521915 107 ntBASIC3.01□□□□□ -1.93
LDB2O43679 COPS8P3-201ENST00000526024 482 ntBASIC3.01□□□□□ -1.93
LDB2O43679 CASP1P1-201ENST00000526345 212 ntBASIC3.01□□□□□ -1.93
LDB2O43679 AC022080.3-201ENST00000544433 482 ntBASIC3.01□□□□□ -1.93
LDB2O43679 TRAV37-201ENST00000553906 342 ntBASIC3.01□□□□□ -1.93
LDB2O43679 MIR4790-201ENST00000577799 79 ntBASIC3.01□□□□□ -1.93
LDB2O43679 AC004805.2-201ENST00000605382 482 ntBASIC3.01□□□□□ -1.93
LDB2O43679 AC068831.7-201ENST00000616954 363 ntBASIC3.01□□□□□ -1.93
LDB2O43679 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.01□□□□□ -1.93
LDB2O43679 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.01□□□□□ -1.93
LDB2O43679 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
LDB2O43679 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3□□□□□ -1.93
LDB2O43679 ZNF807-201ENST00000328088 1707 ntBASIC3□□□□□ -1.93
LDB2O43679 Y_RNA.67-201ENST00000362870 100 ntBASIC3□□□□□ -1.93
LDB2O43679 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3□□□□□ -1.93
LDB2O43679 SNORD116-11-201ENST00000383882 92 ntBASIC3□□□□□ -1.93
LDB2O43679 Y_RNA.387-201ENST00000383918 102 ntBASIC3□□□□□ -1.93
LDB2O43679 RNU6-140P-201ENST00000384566 108 ntBASIC3□□□□□ -1.93
LDB2O43679 AL360182.1-201ENST00000397433 468 ntBASIC3□□□□□ -1.93
LDB2O43679 UBA52P6-201ENST00000399822 382 ntBASIC3□□□□□ -1.93
LDB2O43679 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3□□□□□ -1.93
LDB2O43679 MIR548F5-201ENST00000408421 86 ntBASIC3□□□□□ -1.93
LDB2O43679 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3□□□□□ -1.93
LDB2O43679 MTND1P14-201ENST00000427400 950 ntBASIC3□□□□□ -1.93
LDB2O43679 SNAP23P1-201ENST00000433229 246 ntBASIC3□□□□□ -1.93
LDB2O43679 SNRPEP9-201ENST00000436794 238 ntBASIC3□□□□□ -1.93
LDB2O43679 RPL32P28-201ENST00000443577 397 ntBASIC3□□□□□ -1.93
LDB2O43679 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3□□□□□ -1.93
LDB2O43679 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3□□□□□ -1.93
LDB2O43679 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3□□□□□ -1.93
LDB2O43679 Y_RNA.635-201ENST00000459041 101 ntBASIC3□□□□□ -1.93
LDB2O43679 AP001486.1-201ENST00000463339 476 ntBASIC3□□□□□ -1.93
LDB2O43679 MTND4P17-201ENST00000470444 350 ntBASIC3□□□□□ -1.93
LDB2O43679 AL135752.1-201ENST00000479477 471 ntBASIC3□□□□□ -1.93
LDB2O43679 AC092185.1-201ENST00000491371 97 ntBASIC3□□□□□ -1.93
LDB2O43679 AC008526.1-201ENST00000509149 338 ntBASIC3□□□□□ -1.93
LDB2O43679 RNU1-86P-201ENST00000516108 154 ntBASIC3□□□□□ -1.93
LDB2O43679 MIR892C-201ENST00000516410 77 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms