Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 Y_RNA.450-201ENST00000384198 113 ntBASIC2.96□□□□□ -1.94
ATP2A1O14983 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
ATP2A1O14983 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.96□□□□□ -1.94
ATP2A1O14983 RNA5SP508-201ENST00000411327 119 ntBASIC2.96□□□□□ -1.94
ATP2A1O14983 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.96□□□□□ -1.94
ATP2A1O14983 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.96□□□□□ -1.94
ATP2A1O14983 USP9YP27-201ENST00000418455 438 ntBASIC2.96□□□□□ -1.94
ATP2A1O14983 OOSP1P1-201ENST00000423265 274 ntBASIC2.96□□□□□ -1.94
ATP2A1O14983 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.96□□□□□ -1.94
ATP2A1O14983 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.96□□□□□ -1.94
ATP2A1O14983 SEPT14P3-201ENST00000439401 183 ntBASIC2.96□□□□□ -1.94
ATP2A1O14983 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.96□□□□□ -1.94
ATP2A1O14983 AL732372.2-207ENST00000445840 183 ntBASIC2.96□□□□□ -1.94
ATP2A1O14983 SEPT14P2-201ENST00000453405 183 ntBASIC2.96□□□□□ -1.94
ATP2A1O14983 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.96□□□□□ -1.94
ATP2A1O14983 RPS27AP9-201ENST00000477681 438 ntBASIC2.96□□□□□ -1.94
ATP2A1O14983 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.96□□□□□ -1.94
ATP2A1O14983 AC011352.1-201ENST00000512300 793 ntBASIC2.96□□□□□ -1.94
ATP2A1O14983 SEPT14P4-201ENST00000513445 186 ntBASIC2.96□□□□□ -1.94
ATP2A1O14983 RNU1-41P-201ENST00000516161 162 ntBASIC2.96□□□□□ -1.94
ATP2A1O14983 RNU1-48P-201ENST00000516400 162 ntBASIC2.96□□□□□ -1.94
ATP2A1O14983 FO082796.1-201ENST00000523795 183 ntBASIC2.96□□□□□ -1.94
ATP2A1O14983 AC007536.1-201ENST00000533382 349 ntBASIC2.96□□□□□ -1.94
ATP2A1O14983 MTCO3P13-201ENST00000577757 781 ntBASIC2.96□□□□□ -1.94
ATP2A1O14983 AC020895.1-201ENST00000595362 272 ntBASIC2.96□□□□□ -1.94
ATP2A1O14983 AL627309.6-201ENST00000606857 840 ntBASIC2.96□□□□□ -1.94
ATP2A1O14983 AC004852.3-201ENST00000614131 326 ntBASIC2.96□□□□□ -1.94
ATP2A1O14983 U6atac.1-201ENST00000616025 117 ntBASIC2.96□□□□□ -1.94
ATP2A1O14983 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.96□□□□□ -1.94
ATP2A1O14983 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.96□□□□□ -1.94
ATP2A1O14983 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.95□□□□□ -1.94
ATP2A1O14983 AL354685.2-201ENST00000448218 1447 ntBASIC2.95□□□□□ -1.94
ATP2A1O14983 AC099654.7-201ENST00000635788 2127 ntBASIC2.95□□□□□ -1.94
ATP2A1O14983 NACAP2-201ENST00000318548 624 ntBASIC2.95□□□□□ -1.94
ATP2A1O14983 RNU4-12P-201ENST00000365233 139 ntBASIC2.95□□□□□ -1.94
ATP2A1O14983 MIR181B1-201ENST00000385240 110 ntBASIC2.95□□□□□ -1.94
ATP2A1O14983 AL139095.1-201ENST00000404326 391 ntBASIC2.95□□□□□ -1.94
ATP2A1O14983 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.95□□□□□ -1.94
ATP2A1O14983 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.95□□□□□ -1.94
ATP2A1O14983 AC098614.2-201ENST00000426040 255 ntBASIC2.95□□□□□ -1.94
ATP2A1O14983 UBBP3-201ENST00000445497 241 ntBASIC2.95□□□□□ -1.94
ATP2A1O14983 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.95□□□□□ -1.94
ATP2A1O14983 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.95□□□□□ -1.94
ATP2A1O14983 GSTA11P-201ENST00000452866 669 ntBASIC2.95□□□□□ -1.94
ATP2A1O14983 RPS27AP10-201ENST00000496103 208 ntBASIC2.95□□□□□ -1.94
ATP2A1O14983 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.95□□□□□ -1.94
ATP2A1O14983 AC009901.1-201ENST00000506703 541 ntBASIC2.95□□□□□ -1.94
ATP2A1O14983 AC114786.4-201ENST00000508771 728 ntBASIC2.95□□□□□ -1.94
ATP2A1O14983 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.95□□□□□ -1.94
ATP2A1O14983 RN7SKP24-201ENST00000515888 284 ntBASIC2.95□□□□□ -1.94
ATP2A1O14983 AC025755.1-201ENST00000521306 278 ntBASIC2.95□□□□□ -1.94
ATP2A1O14983 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.95□□□□□ -1.94
ATP2A1O14983 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.95□□□□□ -1.94
ATP2A1O14983 AL137161.1-201ENST00000532231 390 ntBASIC2.95□□□□□ -1.94
ATP2A1O14983 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.95□□□□□ -1.94
ATP2A1O14983 MTND4P14-201ENST00000435799 1354 ntBASIC2.95□□□□□ -1.94
ATP2A1O14983 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
ATP2A1O14983 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
ATP2A1O14983 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.95□□□□□ -1.94
ATP2A1O14983 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
ATP2A1O14983 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
ATP2A1O14983 RNU6-1090P-201ENST00000364065 94 ntBASIC2.94□□□□□ -1.94
ATP2A1O14983 RNU6-371P-201ENST00000364283 108 ntBASIC2.94□□□□□ -1.94
ATP2A1O14983 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.94□□□□□ -1.94
ATP2A1O14983 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.94□□□□□ -1.94
ATP2A1O14983 SNORD21-201ENST00000383953 95 ntBASIC2.94□□□□□ -1.94
ATP2A1O14983 SNORA75B-201ENST00000384053 137 ntBASIC2.94□□□□□ -1.94
ATP2A1O14983 MIR578-201ENST00000384828 96 ntBASIC2.94□□□□□ -1.94
ATP2A1O14983 SNORA40C-201ENST00000391285 128 ntBASIC2.94□□□□□ -1.94
ATP2A1O14983 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.94□□□□□ -1.94
ATP2A1O14983 RNU6-908P-201ENST00000410160 94 ntBASIC2.94□□□□□ -1.94
ATP2A1O14983 AL353729.1-201ENST00000425044 720 ntBASIC2.94□□□□□ -1.94
ATP2A1O14983 MTCO1P20-201ENST00000425366 358 ntBASIC2.94□□□□□ -1.94
ATP2A1O14983 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
ATP2A1O14983 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.94□□□□□ -1.94
ATP2A1O14983 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
ATP2A1O14983 RNU7-180P-201ENST00000459240 63 ntBASIC2.94□□□□□ -1.94
ATP2A1O14983 AC022493.1-201ENST00000492984 337 ntBASIC2.94□□□□□ -1.94
ATP2A1O14983 AC104136.1-201ENST00000512969 394 ntBASIC2.94□□□□□ -1.94
ATP2A1O14983 AC112206.3-201ENST00000514578 389 ntBASIC2.94□□□□□ -1.94
ATP2A1O14983 LRRC34P2-201ENST00000514850 553 ntBASIC2.94□□□□□ -1.94
ATP2A1O14983 SNORA31.19-201ENST00000517079 126 ntBASIC2.94□□□□□ -1.94
ATP2A1O14983 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.94□□□□□ -1.94
ATP2A1O14983 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.94□□□□□ -1.94
ATP2A1O14983 MIR5692A1-201ENST00000580523 69 ntBASIC2.94□□□□□ -1.94
ATP2A1O14983 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.94□□□□□ -1.94
ATP2A1O14983 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.94□□□□□ -1.94
ATP2A1O14983 MTND4LP5-201ENST00000605152 292 ntBASIC2.94□□□□□ -1.94
ATP2A1O14983 YWHAEP7-203ENST00000622054 312 ntBASIC2.94□□□□□ -1.94
ATP2A1O14983 FER-210ENST00000628534 558 ntTSL 5 BASIC2.94□□□□□ -1.94
ATP2A1O14983 MIR6733-201ENST00000635723 61 ntBASIC2.94□□□□□ -1.94
ATP2A1O14983 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.94□□□□□ -1.94
ATP2A1O14983 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.93□□□□□ -1.94
ATP2A1O14983 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.93□□□□□ -1.94
ATP2A1O14983 AC138915.1-201ENST00000565427 1685 ntBASIC2.93□□□□□ -1.94
ATP2A1O14983 RNU6-715P-201ENST00000365204 103 ntBASIC2.93□□□□□ -1.94
ATP2A1O14983 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.93□□□□□ -1.94
ATP2A1O14983 RNU6-658P-201ENST00000384606 106 ntBASIC2.93□□□□□ -1.94
ATP2A1O14983 RPL21P75-201ENST00000396599 483 ntBASIC2.93□□□□□ -1.94
ATP2A1O14983 MIR887-201ENST00000401258 79 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms