Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.32□□□□□ -2.36
CACNA1AO00555 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC0.32□□□□□ -2.36
CACNA1AO00555 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC0.32□□□□□ -2.36
CACNA1AO00555 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC0.32□□□□□ -2.36
CACNA1AO00555 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC0.32□□□□□ -2.36
CACNA1AO00555 AC079791.1-201ENST00000605356 973 ntBASIC0.32□□□□□ -2.36
CACNA1AO00555 AC104763.3-201ENST00000613765 618 ntBASIC0.32□□□□□ -2.36
CACNA1AO00555 AC095031.1-201ENST00000623685 672 ntBASIC0.32□□□□□ -2.36
CACNA1AO00555 AP003400.5-201ENST00000624827 617 ntBASIC0.32□□□□□ -2.36
CACNA1AO00555 MTND5P30-201ENST00000452896 1731 ntBASIC0.32□□□□□ -2.36
CACNA1AO00555 RNU6-270P-201ENST00000364131 105 ntBASIC0.31□□□□□ -2.36
CACNA1AO00555 SNORA68.1-201ENST00000364537 132 ntBASIC0.31□□□□□ -2.36
CACNA1AO00555 RNU6-10P-201ENST00000384036 107 ntBASIC0.31□□□□□ -2.36
CACNA1AO00555 RNU6-15P-201ENST00000384534 107 ntBASIC0.31□□□□□ -2.36
CACNA1AO00555 U3.20-201ENST00000390909 217 ntBASIC0.31□□□□□ -2.36
CACNA1AO00555 MTATP6P31-201ENST00000406985 692 ntBASIC0.31□□□□□ -2.36
CACNA1AO00555 U6atac.2-201ENST00000408644 118 ntBASIC0.31□□□□□ -2.36
CACNA1AO00555 AC009518.2-201ENST00000418056 731 ntBASIC0.31□□□□□ -2.36
CACNA1AO00555 AC093106.2-201ENST00000428212 385 ntBASIC0.31□□□□□ -2.36
CACNA1AO00555 MTND4P6-201ENST00000438297 472 ntBASIC0.31□□□□□ -2.36
CACNA1AO00555 ZNF736P6Y-201ENST00000447526 1213 ntBASIC0.31□□□□□ -2.36
CACNA1AO00555 Z82190.1-201ENST00000454534 490 ntBASIC0.31□□□□□ -2.36
CACNA1AO00555 RPL39P28-201ENST00000465655 155 ntBASIC0.31□□□□□ -2.36
CACNA1AO00555 AP001025.1-201ENST00000486139 332 ntBASIC0.31□□□□□ -2.36
CACNA1AO00555 AC134050.1-201ENST00000495088 933 ntBASIC0.31□□□□□ -2.36
CACNA1AO00555 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC0.31□□□□□ -2.36
CACNA1AO00555 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC0.31□□□□□ -2.36
CACNA1AO00555 AC087897.1-201ENST00000550134 156 ntBASIC0.31□□□□□ -2.36
CACNA1AO00555 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC0.31□□□□□ -2.36
CACNA1AO00555 MIR4764-201ENST00000580680 88 ntBASIC0.31□□□□□ -2.36
CACNA1AO00555 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.31□□□□□ -2.36
CACNA1AO00555 uc_338.17-201ENST00000619633 179 ntBASIC0.31□□□□□ -2.36
CACNA1AO00555 RNU6-1155P-201ENST00000363554 107 ntBASIC0.31□□□□□ -2.36
CACNA1AO00555 Y_RNA.180-201ENST00000363867 113 ntBASIC0.31□□□□□ -2.36
CACNA1AO00555 Y_RNA.551-201ENST00000384661 102 ntBASIC0.31□□□□□ -2.36
CACNA1AO00555 RNU2-49P-201ENST00000410666 184 ntBASIC0.31□□□□□ -2.36
CACNA1AO00555 RNU2-63P-201ENST00000410792 194 ntBASIC0.31□□□□□ -2.36
CACNA1AO00555 AC104164.3-201ENST00000467363 1258 ntBASIC0.31□□□□□ -2.36
CACNA1AO00555 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC0.31□□□□□ -2.36
CACNA1AO00555 SNORA44.1-201ENST00000517031 108 ntBASIC0.31□□□□□ -2.36
CACNA1AO00555 AC107953.1-201ENST00000522216 297 ntBASIC0.31□□□□□ -2.36
CACNA1AO00555 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC0.31□□□□□ -2.36
CACNA1AO00555 MTCYBP27-201ENST00000555160 670 ntBASIC0.31□□□□□ -2.36
CACNA1AO00555 AC087481.2-201ENST00000565492 330 ntBASIC0.31□□□□□ -2.36
CACNA1AO00555 MIR4765-201ENST00000585007 77 ntBASIC0.31□□□□□ -2.36
CACNA1AO00555 OR1M4P-201ENST00000589199 287 ntBASIC0.31□□□□□ -2.36
CACNA1AO00555 AC007490.1-201ENST00000624321 703 ntBASIC0.31□□□□□ -2.36
CACNA1AO00555 AC087821.2-201ENST00000637086 450 ntBASIC0.31□□□□□ -2.36
CACNA1AO00555 MTND4P8-201ENST00000514997 1362 ntBASIC0.3□□□□□ -2.36
CACNA1AO00555 CR848007.1-201ENST00000442354 1699 ntBASIC0.3□□□□□ -2.36
CACNA1AO00555 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC0.3□□□□□ -2.36
CACNA1AO00555 SNORA25.3-201ENST00000363205 127 ntBASIC0.3□□□□□ -2.36
CACNA1AO00555 Y_RNA.172-201ENST00000363765 102 ntBASIC0.3□□□□□ -2.36
CACNA1AO00555 MORN2-203ENST00000409131 544 ntTSL 5 BASIC0.3□□□□□ -2.36
CACNA1AO00555 RNA5SP56-201ENST00000410277 118 ntBASIC0.3□□□□□ -2.36
CACNA1AO00555 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC0.3□□□□□ -2.36
CACNA1AO00555 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC0.3□□□□□ -2.36
CACNA1AO00555 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC0.3□□□□□ -2.36
CACNA1AO00555 BUD31P2-201ENST00000449374 300 ntBASIC0.3□□□□□ -2.36
CACNA1AO00555 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC0.3□□□□□ -2.36
CACNA1AO00555 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC0.3□□□□□ -2.36
CACNA1AO00555 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC0.3□□□□□ -2.36
CACNA1AO00555 DUXAP1-201ENST00000556632 463 ntBASIC0.3□□□□□ -2.36
CACNA1AO00555 MIR5571-201ENST00000577998 113 ntBASIC0.3□□□□□ -2.36
CACNA1AO00555 AC016925.2-201ENST00000605108 242 ntBASIC0.3□□□□□ -2.36
CACNA1AO00555 AC008945.2-201ENST00000606056 604 ntBASIC0.3□□□□□ -2.36
CACNA1AO00555 AC090132.2-201ENST00000615881 347 ntBASIC0.3□□□□□ -2.36
CACNA1AO00555 AC018926.3-201ENST00000618841 406 ntBASIC0.3□□□□□ -2.36
CACNA1AO00555 AC123767.1-202ENST00000620407 817 ntBASIC0.3□□□□□ -2.36
CACNA1AO00555 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC0.3□□□□□ -2.36
CACNA1AO00555 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC0.3□□□□□ -2.36
CACNA1AO00555 RNU6-730P-201ENST00000383954 104 ntBASIC0.3□□□□□ -2.36
CACNA1AO00555 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
CACNA1AO00555 EDDM3CP-201ENST00000415977 425 ntBASIC0.3□□□□□ -2.36
CACNA1AO00555 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC0.3□□□□□ -2.36
CACNA1AO00555 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC0.3□□□□□ -2.36
CACNA1AO00555 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC0.3□□□□□ -2.36
CACNA1AO00555 AL035410.1-201ENST00000427409 427 ntBASIC0.3□□□□□ -2.36
CACNA1AO00555 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC0.3□□□□□ -2.36
CACNA1AO00555 MICF-203ENST00000432679 129 ntBASIC0.3□□□□□ -2.36
CACNA1AO00555 CYP2C59P-201ENST00000457790 269 ntBASIC0.3□□□□□ -2.36
CACNA1AO00555 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC0.3□□□□□ -2.36
CACNA1AO00555 AC008562.1-201ENST00000521763 330 ntBASIC0.3□□□□□ -2.36
CACNA1AO00555 AC007751.1-201ENST00000529260 376 ntBASIC0.3□□□□□ -2.36
CACNA1AO00555 AC016256.1-201ENST00000547971 354 ntBASIC0.3□□□□□ -2.36
CACNA1AO00555 RPL30P11-203ENST00000598995 310 ntBASIC0.3□□□□□ -2.36
CACNA1AO00555 AL355877.2-201ENST00000603670 358 ntBASIC0.3□□□□□ -2.36
CACNA1AO00555 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.3□□□□□ -2.36
CACNA1AO00555 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC0.3□□□□□ -2.36
CACNA1AO00555 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.3□□□□□ -2.36
CACNA1AO00555 U3.8-201ENST00000363675 217 ntBASIC0.29□□□□□ -2.36
CACNA1AO00555 RNU6-1083P-201ENST00000384022 107 ntBASIC0.29□□□□□ -2.36
CACNA1AO00555 SNORA8-201ENST00000384574 139 ntBASIC0.29□□□□□ -2.36
CACNA1AO00555 MIR934-201ENST00000401241 83 ntBASIC0.29□□□□□ -2.36
CACNA1AO00555 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC0.29□□□□□ -2.36
CACNA1AO00555 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC0.29□□□□□ -2.36
CACNA1AO00555 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC0.29□□□□□ -2.36
CACNA1AO00555 RPL7P29-201ENST00000437151 728 ntBASIC0.29□□□□□ -2.36
CACNA1AO00555 MTCO3P45-201ENST00000443036 613 ntBASIC0.29□□□□□ -2.36
CACNA1AO00555 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms