Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 AL079342.1-201ENST00000401460 267 ntBASIC1.42□□□□□ -2.18
UPK2O00526 Y_RNA.623-201ENST00000411128 95 ntBASIC1.42□□□□□ -2.18
UPK2O00526 MTCO2P23-201ENST00000425216 680 ntBASIC1.42□□□□□ -2.18
UPK2O00526 AL353777.1-201ENST00000425552 326 ntBASIC1.42□□□□□ -2.18
UPK2O00526 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.42□□□□□ -2.18
UPK2O00526 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.42□□□□□ -2.18
UPK2O00526 USP9YP15-201ENST00000442391 422 ntBASIC1.42□□□□□ -2.18
UPK2O00526 AC003071.1-201ENST00000451219 789 ntBASIC1.42□□□□□ -2.18
UPK2O00526 RNA5SP57-201ENST00000459463 123 ntBASIC1.42□□□□□ -2.18
UPK2O00526 UBE2DNL-203ENST00000474922 222 ntBASIC1.42□□□□□ -2.18
UPK2O00526 HMGB1P30-201ENST00000492455 606 ntBASIC1.42□□□□□ -2.18
UPK2O00526 RNA5SP182-201ENST00000516064 82 ntBASIC1.42□□□□□ -2.18
UPK2O00526 RNU6-965P-201ENST00000516721 96 ntBASIC1.42□□□□□ -2.18
UPK2O00526 RNU6-1003P-201ENST00000517099 105 ntBASIC1.42□□□□□ -2.18
UPK2O00526 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC1.42□□□□□ -2.18
UPK2O00526 AC022616.6-201ENST00000520479 119 ntBASIC1.42□□□□□ -2.18
UPK2O00526 MIR3118-1-201ENST00000581787 76 ntBASIC1.42□□□□□ -2.18
UPK2O00526 AL158032.1-201ENST00000605401 106 ntBASIC1.42□□□□□ -2.18
UPK2O00526 AC087241.4-201ENST00000612441 480 ntBASIC1.42□□□□□ -2.18
UPK2O00526 MIR3529-201ENST00000637713 78 ntBASIC1.42□□□□□ -2.18
UPK2O00526 AL445523.1-201ENST00000451184 1362 ntBASIC1.42□□□□□ -2.18
UPK2O00526 MTND4P9-201ENST00000507819 1346 ntBASIC1.41□□□□□ -2.18
UPK2O00526 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.41□□□□□ -2.18
UPK2O00526 RNU6-944P-201ENST00000364023 107 ntBASIC1.41□□□□□ -2.18
UPK2O00526 SNORD116-20-201ENST00000384529 92 ntBASIC1.41□□□□□ -2.18
UPK2O00526 MIR10A-201ENST00000385043 110 ntBASIC1.41□□□□□ -2.18
UPK2O00526 SNORA40.19-201ENST00000390846 128 ntBASIC1.41□□□□□ -2.18
UPK2O00526 MIR1294-201ENST00000408503 142 ntBASIC1.41□□□□□ -2.18
UPK2O00526 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.41□□□□□ -2.18
UPK2O00526 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.41□□□□□ -2.18
UPK2O00526 MTND1P32-201ENST00000433043 938 ntBASIC1.41□□□□□ -2.18
UPK2O00526 RPL22P17-201ENST00000438729 315 ntBASIC1.41□□□□□ -2.18
UPK2O00526 AC003989.2-201ENST00000440224 169 ntBASIC1.41□□□□□ -2.18
UPK2O00526 ZNF736P1Y-201ENST00000440402 1276 ntBASIC1.41□□□□□ -2.18
UPK2O00526 CALM1P1-201ENST00000442082 433 ntBASIC1.41□□□□□ -2.18
UPK2O00526 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.41□□□□□ -2.18
UPK2O00526 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.41□□□□□ -2.18
UPK2O00526 PRELID3BP1-201ENST00000457142 540 ntBASIC1.41□□□□□ -2.18
UPK2O00526 AC091965.2-201ENST00000512324 613 ntBASIC1.41□□□□□ -2.18
UPK2O00526 RNU6-201P-201ENST00000517100 61 ntBASIC1.41□□□□□ -2.18
UPK2O00526 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.41□□□□□ -2.18
UPK2O00526 AP003122.4-201ENST00000530980 758 ntBASIC1.41□□□□□ -2.18
UPK2O00526 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.41□□□□□ -2.18
UPK2O00526 AC110588.1-201ENST00000559699 137 ntBASIC1.41□□□□□ -2.18
UPK2O00526 AC090897.2-201ENST00000581715 130 ntBASIC1.41□□□□□ -2.18
UPK2O00526 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.41□□□□□ -2.18
UPK2O00526 AC121334.2-201ENST00000605387 271 ntBASIC1.41□□□□□ -2.18
UPK2O00526 AL139022.2-201ENST00000606934 443 ntBASIC1.41□□□□□ -2.18
UPK2O00526 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.41□□□□□ -2.18
UPK2O00526 AL359314.1-201ENST00000616913 261 ntBASIC1.41□□□□□ -2.18
UPK2O00526 AP002782.1-201ENST00000623107 614 ntBASIC1.41□□□□□ -2.18
UPK2O00526 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.41□□□□□ -2.18
UPK2O00526 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.41□□□□□ -2.18
UPK2O00526 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.41□□□□□ -2.18
UPK2O00526 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
UPK2O00526 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
UPK2O00526 RNY4P24-201ENST00000362735 96 ntBASIC1.4□□□□□ -2.19
UPK2O00526 RNU6-960P-201ENST00000364056 120 ntBASIC1.4□□□□□ -2.19
UPK2O00526 RNU6-743P-201ENST00000364151 106 ntBASIC1.4□□□□□ -2.19
UPK2O00526 RNU6-234P-201ENST00000365229 104 ntBASIC1.4□□□□□ -2.19
UPK2O00526 RNU6-72P-201ENST00000384285 79 ntBASIC1.4□□□□□ -2.19
UPK2O00526 MIR9-3-201ENST00000385084 90 ntBASIC1.4□□□□□ -2.19
UPK2O00526 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.4□□□□□ -2.19
UPK2O00526 AL022400.1-201ENST00000423946 935 ntBASIC1.4□□□□□ -2.19
UPK2O00526 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.4□□□□□ -2.19
UPK2O00526 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.4□□□□□ -2.19
UPK2O00526 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.4□□□□□ -2.19
UPK2O00526 AL645568.3-201ENST00000433683 316 ntBASIC1.4□□□□□ -2.19
UPK2O00526 AL136380.1-201ENST00000447970 162 ntBASIC1.4□□□□□ -2.19
UPK2O00526 PPP1R2P5-201ENST00000457256 603 ntBASIC1.4□□□□□ -2.19
UPK2O00526 AL121594.1-201ENST00000475906 575 ntBASIC1.4□□□□□ -2.19
UPK2O00526 AP001025.1-201ENST00000486139 332 ntBASIC1.4□□□□□ -2.19
UPK2O00526 RPS29P11-201ENST00000496507 171 ntBASIC1.4□□□□□ -2.19
UPK2O00526 UBE2V1P12-201ENST00000503954 474 ntBASIC1.4□□□□□ -2.19
UPK2O00526 AC119751.5-201ENST00000514077 770 ntBASIC1.4□□□□□ -2.19
UPK2O00526 AC112206.3-201ENST00000514578 389 ntBASIC1.4□□□□□ -2.19
UPK2O00526 RNU2-10P-201ENST00000516375 211 ntBASIC1.4□□□□□ -2.19
UPK2O00526 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.4□□□□□ -2.19
UPK2O00526 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.4□□□□□ -2.19
UPK2O00526 BNIP3P25-201ENST00000596023 559 ntBASIC1.4□□□□□ -2.19
UPK2O00526 AC112187.2-201ENST00000604345 283 ntBASIC1.4□□□□□ -2.19
UPK2O00526 AC105148.1-201ENST00000604961 409 ntBASIC1.4□□□□□ -2.19
UPK2O00526 AC144521.1-201ENST00000607148 956 ntBASIC1.4□□□□□ -2.19
UPK2O00526 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.4□□□□□ -2.19
UPK2O00526 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
UPK2O00526 RNU6-212P-201ENST00000362642 104 ntBASIC1.39□□□□□ -2.19
UPK2O00526 RNU6-655P-201ENST00000362858 107 ntBASIC1.39□□□□□ -2.19
UPK2O00526 U8.2-201ENST00000363156 134 ntBASIC1.39□□□□□ -2.19
UPK2O00526 Y_RNA.111-201ENST00000363248 100 ntBASIC1.39□□□□□ -2.19
UPK2O00526 RNU6-546P-201ENST00000383991 107 ntBASIC1.39□□□□□ -2.19
UPK2O00526 RNU6-622P-201ENST00000384272 103 ntBASIC1.39□□□□□ -2.19
UPK2O00526 RNU11-3P-201ENST00000391111 133 ntBASIC1.39□□□□□ -2.19
UPK2O00526 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.39□□□□□ -2.19
UPK2O00526 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.39□□□□□ -2.19
UPK2O00526 RPL23AP39-201ENST00000415533 405 ntBASIC1.39□□□□□ -2.19
UPK2O00526 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.39□□□□□ -2.19
UPK2O00526 RPL31P63-201ENST00000422565 375 ntBASIC1.39□□□□□ -2.19
UPK2O00526 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC1.39□□□□□ -2.19
UPK2O00526 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.39□□□□□ -2.19
UPK2O00526 AC084290.1-201ENST00000434995 374 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms