Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 SNRPEP7-201ENST00000438350 220 ntBASIC0.39□□□□□ -2.35
HMGN4O00479 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC0.39□□□□□ -2.35
HMGN4O00479 TAF9P1-201ENST00000445421 515 ntBASIC0.39□□□□□ -2.35
HMGN4O00479 AL035666.1-201ENST00000446195 348 ntBASIC0.39□□□□□ -2.35
HMGN4O00479 TAF9P2-201ENST00000454958 515 ntBASIC0.39□□□□□ -2.35
HMGN4O00479 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.39□□□□□ -2.35
HMGN4O00479 AC134050.1-201ENST00000495088 933 ntBASIC0.39□□□□□ -2.35
HMGN4O00479 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.39□□□□□ -2.35
HMGN4O00479 HMGN1P13-201ENST00000505795 138 ntBASIC0.39□□□□□ -2.35
HMGN4O00479 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC0.39□□□□□ -2.35
HMGN4O00479 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.39□□□□□ -2.35
HMGN4O00479 RNU6-229P-201ENST00000516614 102 ntBASIC0.39□□□□□ -2.35
HMGN4O00479 RNU6-197P-201ENST00000516680 100 ntBASIC0.39□□□□□ -2.35
HMGN4O00479 RNU6-678P-201ENST00000516832 109 ntBASIC0.39□□□□□ -2.35
HMGN4O00479 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.39□□□□□ -2.35
HMGN4O00479 AL355598.1-201ENST00000604169 202 ntBASIC0.39□□□□□ -2.35
HMGN4O00479 Z82243.1-201ENST00000609432 473 ntBASIC0.39□□□□□ -2.35
HMGN4O00479 AC009033.1-201ENST00000624279 431 ntBASIC0.39□□□□□ -2.35
HMGN4O00479 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.39□□□□□ -2.35
HMGN4O00479 OR4G3P-201ENST00000633500 913 ntBASIC0.39□□□□□ -2.35
HMGN4O00479 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.38□□□□□ -2.35
HMGN4O00479 RNU6-942P-201ENST00000363002 107 ntBASIC0.38□□□□□ -2.35
HMGN4O00479 RNU6-819P-201ENST00000364116 107 ntBASIC0.38□□□□□ -2.35
HMGN4O00479 SNORA25.9-201ENST00000365087 128 ntBASIC0.38□□□□□ -2.35
HMGN4O00479 MIR608-201ENST00000384820 100 ntBASIC0.38□□□□□ -2.35
HMGN4O00479 MIR7-1-201ENST00000384871 110 ntBASIC0.38□□□□□ -2.35
HMGN4O00479 MIR10B-201ENST00000385011 110 ntBASIC0.38□□□□□ -2.35
HMGN4O00479 MRPL35P1-201ENST00000404272 572 ntBASIC0.38□□□□□ -2.35
HMGN4O00479 AL139397.2-201ENST00000404529 772 ntBASIC0.38□□□□□ -2.35
HMGN4O00479 RNU2-32P-201ENST00000411193 191 ntBASIC0.38□□□□□ -2.35
HMGN4O00479 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
HMGN4O00479 MTND1P28-201ENST00000435623 950 ntBASIC0.38□□□□□ -2.35
HMGN4O00479 HSPE1P13-201ENST00000451143 297 ntBASIC0.38□□□□□ -2.35
HMGN4O00479 RPL23AP35-201ENST00000451906 501 ntBASIC0.38□□□□□ -2.35
HMGN4O00479 OR2AQ1P-201ENST00000451972 200 ntBASIC0.38□□□□□ -2.35
HMGN4O00479 CECR9-201ENST00000453421 199 ntBASIC0.38□□□□□ -2.35
HMGN4O00479 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC0.38□□□□□ -2.35
HMGN4O00479 AKIRIN2P1-201ENST00000505898 352 ntBASIC0.38□□□□□ -2.35
HMGN4O00479 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.38□□□□□ -2.35
HMGN4O00479 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.38□□□□□ -2.35
HMGN4O00479 LARP7P2-201ENST00000575306 125 ntBASIC0.38□□□□□ -2.35
HMGN4O00479 MIR151B-201ENST00000584249 96 ntBASIC0.38□□□□□ -2.35
HMGN4O00479 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.38□□□□□ -2.35
HMGN4O00479 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
HMGN4O00479 Y_RNA.164-201ENST00000363709 102 ntBASIC0.37□□□□□ -2.35
HMGN4O00479 RNU6-619P-201ENST00000365146 108 ntBASIC0.37□□□□□ -2.35
HMGN4O00479 RNU6-1065P-201ENST00000384513 106 ntBASIC0.37□□□□□ -2.35
HMGN4O00479 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
HMGN4O00479 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.37□□□□□ -2.35
HMGN4O00479 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.37□□□□□ -2.35
HMGN4O00479 AL022400.1-201ENST00000423946 935 ntBASIC0.37□□□□□ -2.35
HMGN4O00479 UBE2V1P8-201ENST00000437166 265 ntBASIC0.37□□□□□ -2.35
HMGN4O00479 AL929288.2-201ENST00000446368 407 ntBASIC0.37□□□□□ -2.35
HMGN4O00479 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
HMGN4O00479 AC092001.1-201ENST00000453012 261 ntBASIC0.37□□□□□ -2.35
HMGN4O00479 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.37□□□□□ -2.35
HMGN4O00479 RNU4-57P-201ENST00000515980 135 ntBASIC0.37□□□□□ -2.35
HMGN4O00479 RNU6-581P-201ENST00000516214 105 ntBASIC0.37□□□□□ -2.35
HMGN4O00479 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC0.37□□□□□ -2.35
HMGN4O00479 AC022616.8-201ENST00000533569 253 ntBASIC0.37□□□□□ -2.35
HMGN4O00479 MRPS36P5-201ENST00000551909 298 ntBASIC0.37□□□□□ -2.35
HMGN4O00479 MIR5000-201ENST00000577717 103 ntBASIC0.37□□□□□ -2.35
HMGN4O00479 RPL30P11-203ENST00000598995 310 ntBASIC0.37□□□□□ -2.35
HMGN4O00479 MZT1P2-201ENST00000604387 248 ntBASIC0.37□□□□□ -2.35
HMGN4O00479 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC0.37□□□□□ -2.35
HMGN4O00479 AC090970.3-201ENST00000612566 866 ntBASIC0.37□□□□□ -2.35
HMGN4O00479 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.36□□□□□ -2.35
HMGN4O00479 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
HMGN4O00479 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
HMGN4O00479 RNU6-112P-201ENST00000363599 104 ntBASIC0.36□□□□□ -2.35
HMGN4O00479 Y_RNA.245-201ENST00000364493 95 ntBASIC0.36□□□□□ -2.35
HMGN4O00479 RNU6-546P-201ENST00000383991 107 ntBASIC0.36□□□□□ -2.35
HMGN4O00479 RPL23AP32-201ENST00000395315 459 ntBASIC0.36□□□□□ -2.35
HMGN4O00479 AC119751.3-201ENST00000399720 670 ntBASIC0.36□□□□□ -2.35
HMGN4O00479 AL117342.1-201ENST00000404861 406 ntBASIC0.36□□□□□ -2.35
HMGN4O00479 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC0.36□□□□□ -2.35
HMGN4O00479 AL050341.1-201ENST00000447743 313 ntBASIC0.36□□□□□ -2.35
HMGN4O00479 AC132479.1-201ENST00000449160 144 ntBASIC0.36□□□□□ -2.35
HMGN4O00479 TPRKBP1-201ENST00000456243 481 ntBASIC0.36□□□□□ -2.35
HMGN4O00479 RPL30P1-201ENST00000488676 339 ntBASIC0.36□□□□□ -2.35
HMGN4O00479 AL163195.1-201ENST00000496941 348 ntBASIC0.36□□□□□ -2.35
HMGN4O00479 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.36□□□□□ -2.35
HMGN4O00479 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.36□□□□□ -2.35
HMGN4O00479 RNU6-703P-201ENST00000516946 107 ntBASIC0.36□□□□□ -2.35
HMGN4O00479 AP003392.2-201ENST00000527269 208 ntBASIC0.36□□□□□ -2.35
HMGN4O00479 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.36□□□□□ -2.35
HMGN4O00479 TRAV32-201ENST00000553993 340 ntBASIC0.36□□□□□ -2.35
HMGN4O00479 AL137100.2-201ENST00000555786 315 ntBASIC0.36□□□□□ -2.35
HMGN4O00479 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.36□□□□□ -2.35
HMGN4O00479 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC0.36□□□□□ -2.35
HMGN4O00479 RNU6-91P-201ENST00000607774 107 ntBASIC0.36□□□□□ -2.35
HMGN4O00479 AC004009.2-201ENST00000623016 728 ntBASIC0.36□□□□□ -2.35
HMGN4O00479 LINC00216-201ENST00000623548 1126 ntBASIC0.36□□□□□ -2.35
HMGN4O00479 AC008993.2-201ENST00000631744 806 ntBASIC0.36□□□□□ -2.35
HMGN4O00479 AL590396.4-201ENST00000636779 956 ntBASIC0.36□□□□□ -2.35
HMGN4O00479 AC100821.1-201ENST00000523153 2479 ntBASIC0.36□□□□□ -2.35
HMGN4O00479 MTND4P16-201ENST00000466108 1367 ntBASIC0.35□□□□□ -2.35
HMGN4O00479 Y_RNA.99-201ENST00000363138 105 ntBASIC0.35□□□□□ -2.35
HMGN4O00479 RNU1-39P-201ENST00000383897 165 ntBASIC0.35□□□□□ -2.35
HMGN4O00479 RNU6-658P-201ENST00000384606 106 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms