Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.45□□□□□ -1.86
FOXN3O00409 AC006946.1-201ENST00000429106 328 ntBASIC3.45□□□□□ -1.86
FOXN3O00409 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.45□□□□□ -1.86
FOXN3O00409 snoU13.22-201ENST00000459428 104 ntBASIC3.45□□□□□ -1.86
FOXN3O00409 RNU7-23P-201ENST00000459465 62 ntBASIC3.45□□□□□ -1.86
FOXN3O00409 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.45□□□□□ -1.86
FOXN3O00409 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.45□□□□□ -1.86
FOXN3O00409 Y_RNA.687-201ENST00000516558 91 ntBASIC3.45□□□□□ -1.86
FOXN3O00409 SNORA31.26-201ENST00000517250 137 ntBASIC3.45□□□□□ -1.86
FOXN3O00409 AC069113.1-201ENST00000517763 267 ntBASIC3.45□□□□□ -1.86
FOXN3O00409 AC025423.5-201ENST00000550230 219 ntBASIC3.45□□□□□ -1.86
FOXN3O00409 MIR4742-201ENST00000581069 85 ntBASIC3.45□□□□□ -1.86
FOXN3O00409 AL133255.1-201ENST00000606374 441 ntBASIC3.45□□□□□ -1.86
FOXN3O00409 RNU6-6P-201ENST00000606623 107 ntBASIC3.45□□□□□ -1.86
FOXN3O00409 AL157817.1-201ENST00000614264 790 ntBASIC3.45□□□□□ -1.86
FOXN3O00409 AC090617.7-201ENST00000623952 126 ntBASIC3.45□□□□□ -1.86
FOXN3O00409 AL133216.2-202ENST00000634512 349 ntBASIC3.45□□□□□ -1.86
FOXN3O00409 U6.105-201ENST00000637379 88 ntBASIC3.45□□□□□ -1.86
FOXN3O00409 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
FOXN3O00409 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
FOXN3O00409 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
FOXN3O00409 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
FOXN3O00409 AC110491.1-201ENST00000562191 2010 ntBASIC3.44□□□□□ -1.86
FOXN3O00409 AC091564.4-201ENST00000533934 2194 ntBASIC3.44□□□□□ -1.86
FOXN3O00409 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.44□□□□□ -1.86
FOXN3O00409 MTND4P23-201ENST00000447723 1363 ntBASIC3.44□□□□□ -1.86
FOXN3O00409 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
FOXN3O00409 SNORA71.3-201ENST00000362582 128 ntBASIC3.44□□□□□ -1.86
FOXN3O00409 Y_RNA.166-201ENST00000363730 102 ntBASIC3.44□□□□□ -1.86
FOXN3O00409 MIR449B-201ENST00000384995 97 ntBASIC3.44□□□□□ -1.86
FOXN3O00409 snosnR66.1-201ENST00000391095 99 ntBASIC3.44□□□□□ -1.86
FOXN3O00409 RPS20P15-201ENST00000412792 311 ntBASIC3.44□□□□□ -1.86
FOXN3O00409 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.44□□□□□ -1.86
FOXN3O00409 AC093151.1-201ENST00000427711 313 ntBASIC3.44□□□□□ -1.86
FOXN3O00409 AC098831.1-201ENST00000440661 216 ntBASIC3.44□□□□□ -1.86
FOXN3O00409 AL031274.1-201ENST00000450334 232 ntBASIC3.44□□□□□ -1.86
FOXN3O00409 PPP1R2P5-201ENST00000457256 603 ntBASIC3.44□□□□□ -1.86
FOXN3O00409 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.44□□□□□ -1.86
FOXN3O00409 HMGN1P13-201ENST00000505795 138 ntBASIC3.44□□□□□ -1.86
FOXN3O00409 AC079140.5-201ENST00000507882 310 ntBASIC3.44□□□□□ -1.86
FOXN3O00409 FAM206BP-201ENST00000510179 541 ntBASIC3.44□□□□□ -1.86
FOXN3O00409 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.44□□□□□ -1.86
FOXN3O00409 RNU6-1332P-201ENST00000516666 104 ntBASIC3.44□□□□□ -1.86
FOXN3O00409 SNORA25.17-201ENST00000517184 124 ntBASIC3.44□□□□□ -1.86
FOXN3O00409 AC090136.1-201ENST00000520009 240 ntBASIC3.44□□□□□ -1.86
FOXN3O00409 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.44□□□□□ -1.86
FOXN3O00409 AC011611.1-201ENST00000552179 197 ntBASIC3.44□□□□□ -1.86
FOXN3O00409 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.44□□□□□ -1.86
FOXN3O00409 AC005498.1-201ENST00000592125 465 ntBASIC3.44□□□□□ -1.86
FOXN3O00409 AL355877.2-201ENST00000603670 358 ntBASIC3.44□□□□□ -1.86
FOXN3O00409 AC123912.5-201ENST00000605470 343 ntBASIC3.44□□□□□ -1.86
FOXN3O00409 AC073657.2-201ENST00000605661 303 ntBASIC3.44□□□□□ -1.86
FOXN3O00409 uc_338.5-201ENST00000611839 155 ntBASIC3.44□□□□□ -1.86
FOXN3O00409 RMST_4.1-201ENST00000616886 107 ntBASIC3.44□□□□□ -1.86
FOXN3O00409 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.44□□□□□ -1.86
FOXN3O00409 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.44□□□□□ -1.86
FOXN3O00409 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
FOXN3O00409 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.44□□□□□ -1.86
FOXN3O00409 MTCO1P12-201ENST00000414273 1543 ntBASIC3.44□□□□□ -1.86
FOXN3O00409 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.43□□□□□ -1.86
FOXN3O00409 RNU6-858P-201ENST00000362436 107 ntBASIC3.43□□□□□ -1.86
FOXN3O00409 SNORD113-7-201ENST00000363762 77 ntBASIC3.43□□□□□ -1.86
FOXN3O00409 RNU6-1280P-201ENST00000365211 107 ntBASIC3.43□□□□□ -1.86
FOXN3O00409 RNU6-805P-201ENST00000365643 106 ntBASIC3.43□□□□□ -1.86
FOXN3O00409 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
FOXN3O00409 Y_RNA.460-201ENST00000384255 102 ntBASIC3.43□□□□□ -1.86
FOXN3O00409 RNU6-831P-201ENST00000384548 107 ntBASIC3.43□□□□□ -1.86
FOXN3O00409 Y_RNA.530-201ENST00000384587 101 ntBASIC3.43□□□□□ -1.86
FOXN3O00409 RNU6-510P-201ENST00000391239 108 ntBASIC3.43□□□□□ -1.86
FOXN3O00409 MIR450B-201ENST00000401182 78 ntBASIC3.43□□□□□ -1.86
FOXN3O00409 RNA5SP293-201ENST00000410527 113 ntBASIC3.43□□□□□ -1.86
FOXN3O00409 MTND3P8-201ENST00000412909 339 ntBASIC3.43□□□□□ -1.86
FOXN3O00409 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.43□□□□□ -1.86
FOXN3O00409 USP9YP20-201ENST00000419224 558 ntBASIC3.43□□□□□ -1.86
FOXN3O00409 MTCO3P46-201ENST00000425787 232 ntBASIC3.43□□□□□ -1.86
FOXN3O00409 IFNA20P-201ENST00000436840 528 ntBASIC3.43□□□□□ -1.86
FOXN3O00409 RPL23AP22-201ENST00000437556 453 ntBASIC3.43□□□□□ -1.86
FOXN3O00409 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.43□□□□□ -1.86
FOXN3O00409 AC125238.1-201ENST00000448842 249 ntBASIC3.43□□□□□ -1.86
FOXN3O00409 NDUFB1P2-201ENST00000449477 176 ntBASIC3.43□□□□□ -1.86
FOXN3O00409 RPS29P12-201ENST00000460178 152 ntBASIC3.43□□□□□ -1.86
FOXN3O00409 RPS27P29-201ENST00000463110 252 ntBASIC3.43□□□□□ -1.86
FOXN3O00409 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.43□□□□□ -1.86
FOXN3O00409 FGF7P4-201ENST00000509595 295 ntBASIC3.43□□□□□ -1.86
FOXN3O00409 RNA5SP217-201ENST00000515959 91 ntBASIC3.43□□□□□ -1.86
FOXN3O00409 RNU6-277P-201ENST00000516272 106 ntBASIC3.43□□□□□ -1.86
FOXN3O00409 SCARNA15.1-201ENST00000516384 125 ntBASIC3.43□□□□□ -1.86
FOXN3O00409 CYCSP27-201ENST00000527643 293 ntBASIC3.43□□□□□ -1.86
FOXN3O00409 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.43□□□□□ -1.86
FOXN3O00409 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.43□□□□□ -1.86
FOXN3O00409 AC021739.1-201ENST00000559631 174 ntBASIC3.43□□□□□ -1.86
FOXN3O00409 MIR5692C1-201ENST00000585309 91 ntBASIC3.43□□□□□ -1.86
FOXN3O00409 AC008121.1-201ENST00000603244 268 ntBASIC3.43□□□□□ -1.86
FOXN3O00409 APOOP1-201ENST00000604695 592 ntBASIC3.43□□□□□ -1.86
FOXN3O00409 AC021646.1-201ENST00000605469 484 ntBASIC3.43□□□□□ -1.86
FOXN3O00409 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
FOXN3O00409 MIR6075-201ENST00000620782 95 ntBASIC3.43□□□□□ -1.86
FOXN3O00409 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
FOXN3O00409 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
FOXN3O00409 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms