Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC011979.2-201ENST00000527568 352 ntBASIC1.52□□□□□ -2.17
UPK1AO00322 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.52□□□□□ -2.17
UPK1AO00322 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.52□□□□□ -2.17
UPK1AO00322 AC027807.1-201ENST00000559921 996 ntBASIC1.52□□□□□ -2.17
UPK1AO00322 MIR3683-201ENST00000580847 82 ntBASIC1.52□□□□□ -2.17
UPK1AO00322 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.52□□□□□ -2.17
UPK1AO00322 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.52□□□□□ -2.17
UPK1AO00322 RPL30P11-203ENST00000598995 310 ntBASIC1.52□□□□□ -2.17
UPK1AO00322 AL158827.2-201ENST00000602494 330 ntBASIC1.52□□□□□ -2.17
UPK1AO00322 AC073410.2-201ENST00000603240 332 ntBASIC1.52□□□□□ -2.17
UPK1AO00322 MIR502-201ENST00000606349 86 ntBASIC1.52□□□□□ -2.17
UPK1AO00322 AC108747.1-201ENST00000609508 535 ntBASIC1.52□□□□□ -2.17
UPK1AO00322 AC092656.1-203ENST00000624134 423 ntBASIC1.52□□□□□ -2.17
UPK1AO00322 AC010608.3-201ENST00000625048 527 ntBASIC1.52□□□□□ -2.17
UPK1AO00322 AL691447.3-201ENST00000635020 330 ntBASIC1.52□□□□□ -2.17
UPK1AO00322 ZNF876P-202ENST00000398732 1485 ntBASIC1.51□□□□□ -2.17
UPK1AO00322 AC008555.8-201ENST00000623602 2168 ntBASIC1.51□□□□□ -2.17
UPK1AO00322 RNY4P16-201ENST00000364768 94 ntBASIC1.51□□□□□ -2.17
UPK1AO00322 U3.13-201ENST00000364804 214 ntBASIC1.51□□□□□ -2.17
UPK1AO00322 RNU5E-6P-201ENST00000365574 115 ntBASIC1.51□□□□□ -2.17
UPK1AO00322 RNU6-1032P-201ENST00000384100 107 ntBASIC1.51□□□□□ -2.17
UPK1AO00322 RNU1-57P-201ENST00000384491 166 ntBASIC1.51□□□□□ -2.17
UPK1AO00322 MIR320A-201ENST00000385302 82 ntBASIC1.51□□□□□ -2.17
UPK1AO00322 SNORA40.19-201ENST00000390846 128 ntBASIC1.51□□□□□ -2.17
UPK1AO00322 RNU6-1176P-201ENST00000390955 107 ntBASIC1.51□□□□□ -2.17
UPK1AO00322 MTATP6P19-201ENST00000413797 659 ntBASIC1.51□□□□□ -2.17
UPK1AO00322 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.51□□□□□ -2.17
UPK1AO00322 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.51□□□□□ -2.17
UPK1AO00322 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.51□□□□□ -2.17
UPK1AO00322 AL354692.1-201ENST00000423044 315 ntBASIC1.51□□□□□ -2.17
UPK1AO00322 AL353777.1-201ENST00000425552 326 ntBASIC1.51□□□□□ -2.17
UPK1AO00322 AL121890.1-201ENST00000435457 205 ntBASIC1.51□□□□□ -2.17
UPK1AO00322 KATNBL1P6-201ENST00000453433 915 ntBASIC1.51□□□□□ -2.17
UPK1AO00322 SSXP1-201ENST00000453640 473 ntBASIC1.51□□□□□ -2.17
UPK1AO00322 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.51□□□□□ -2.17
UPK1AO00322 HMGB1P35-201ENST00000503360 598 ntBASIC1.51□□□□□ -2.17
UPK1AO00322 YWHAEP4-201ENST00000505390 198 ntBASIC1.51□□□□□ -2.17
UPK1AO00322 AC109927.2-201ENST00000506416 303 ntBASIC1.51□□□□□ -2.17
UPK1AO00322 RNU6-1003P-201ENST00000517099 105 ntBASIC1.51□□□□□ -2.17
UPK1AO00322 RNU6-201P-201ENST00000517100 61 ntBASIC1.51□□□□□ -2.17
UPK1AO00322 AC034114.1-201ENST00000520293 285 ntBASIC1.51□□□□□ -2.17
UPK1AO00322 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.51□□□□□ -2.17
UPK1AO00322 AP005435.4-201ENST00000529514 284 ntBASIC1.51□□□□□ -2.17
UPK1AO00322 OR5B19P-201ENST00000531766 928 ntBASIC1.51□□□□□ -2.17
UPK1AO00322 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
UPK1AO00322 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.51□□□□□ -2.17
UPK1AO00322 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.51□□□□□ -2.17
UPK1AO00322 MTCO2P2-201ENST00000591258 225 ntBASIC1.51□□□□□ -2.17
UPK1AO00322 AL031281.1-201ENST00000604049 488 ntBASIC1.51□□□□□ -2.17
UPK1AO00322 AC005034.5-201ENST00000604219 466 ntBASIC1.51□□□□□ -2.17
UPK1AO00322 AL391813.2-201ENST00000609113 322 ntBASIC1.51□□□□□ -2.17
UPK1AO00322 AC093788.1-201ENST00000609356 927 ntBASIC1.51□□□□□ -2.17
UPK1AO00322 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.51□□□□□ -2.17
UPK1AO00322 AL139418.1-201ENST00000613613 177 ntBASIC1.51□□□□□ -2.17
UPK1AO00322 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.51□□□□□ -2.17
UPK1AO00322 MIR3529-201ENST00000637713 78 ntBASIC1.51□□□□□ -2.17
UPK1AO00322 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.51□□□□□ -2.17
UPK1AO00322 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.5□□□□□ -2.17
UPK1AO00322 MTND4P23-201ENST00000447723 1363 ntBASIC1.5□□□□□ -2.17
UPK1AO00322 RNU6-511P-201ENST00000363496 107 ntBASIC1.5□□□□□ -2.17
UPK1AO00322 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
UPK1AO00322 AL591034.2-201ENST00000402839 359 ntBASIC1.5□□□□□ -2.17
UPK1AO00322 RN7SKP101-201ENST00000411376 320 ntBASIC1.5□□□□□ -2.17
UPK1AO00322 AC092809.3-201ENST00000415453 231 ntBASIC1.5□□□□□ -2.17
UPK1AO00322 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.5□□□□□ -2.17
UPK1AO00322 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.5□□□□□ -2.17
UPK1AO00322 MTND1P20-201ENST00000430341 950 ntBASIC1.5□□□□□ -2.17
UPK1AO00322 MTND1P32-201ENST00000433043 938 ntBASIC1.5□□□□□ -2.17
UPK1AO00322 AL353689.1-201ENST00000438895 199 ntBASIC1.5□□□□□ -2.17
UPK1AO00322 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.5□□□□□ -2.17
UPK1AO00322 MTND6P13-201ENST00000443510 523 ntBASIC1.5□□□□□ -2.17
UPK1AO00322 AL009048.1-201ENST00000450437 298 ntBASIC1.5□□□□□ -2.17
UPK1AO00322 AL049829.1-201ENST00000465411 156 ntBASIC1.5□□□□□ -2.17
UPK1AO00322 MED28P2-201ENST00000475771 317 ntBASIC1.5□□□□□ -2.17
UPK1AO00322 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.5□□□□□ -2.17
UPK1AO00322 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.5□□□□□ -2.17
UPK1AO00322 Y_RNA.689-201ENST00000516589 107 ntBASIC1.5□□□□□ -2.17
UPK1AO00322 RNU6-586P-201ENST00000517265 104 ntBASIC1.5□□□□□ -2.17
UPK1AO00322 AC136619.2-201ENST00000563361 631 ntBASIC1.5□□□□□ -2.17
UPK1AO00322 AP001004.1-201ENST00000582468 324 ntBASIC1.5□□□□□ -2.17
UPK1AO00322 NDUFA8P1-201ENST00000605525 367 ntBASIC1.5□□□□□ -2.17
UPK1AO00322 AC144521.1-201ENST00000607148 956 ntBASIC1.5□□□□□ -2.17
UPK1AO00322 MIR15A-201ENST00000607334 83 ntBASIC1.5□□□□□ -2.17
UPK1AO00322 AL355816.2-201ENST00000610049 647 ntBASIC1.5□□□□□ -2.17
UPK1AO00322 AC024940.5-201ENST00000622889 474 ntBASIC1.5□□□□□ -2.17
UPK1AO00322 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
UPK1AO00322 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
UPK1AO00322 AC006026.1-201ENST00000444025 1803 ntBASIC1.5□□□□□ -2.17
UPK1AO00322 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
UPK1AO00322 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
UPK1AO00322 RNU1-23P-201ENST00000363361 144 ntBASIC1.49□□□□□ -2.17
UPK1AO00322 RNU6-960P-201ENST00000364056 120 ntBASIC1.49□□□□□ -2.17
UPK1AO00322 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
UPK1AO00322 AC016831.2-201ENST00000417179 352 ntBASIC1.49□□□□□ -2.17
UPK1AO00322 RPS15AP12-201ENST00000419498 388 ntBASIC1.49□□□□□ -2.17
UPK1AO00322 AC096920.1-201ENST00000423991 241 ntBASIC1.49□□□□□ -2.17
UPK1AO00322 MTCO2P23-201ENST00000425216 680 ntBASIC1.49□□□□□ -2.17
UPK1AO00322 RPL23AP30-201ENST00000432419 501 ntBASIC1.49□□□□□ -2.17
UPK1AO00322 RPL37P21-201ENST00000435890 276 ntBASIC1.49□□□□□ -2.17
UPK1AO00322 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms