Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 SNORA70B-201ENST00000384210 135 ntBASIC0.23□□□□□ -2.37
CHKB-CPT1BH3BT56 MIR194-1-201ENST00000384892 85 ntBASIC0.23□□□□□ -2.37
CHKB-CPT1BH3BT56 UBE2V1P2-201ENST00000397758 440 ntBASIC0.23□□□□□ -2.37
CHKB-CPT1BH3BT56 AL136133.1-201ENST00000413694 376 ntBASIC0.23□□□□□ -2.37
CHKB-CPT1BH3BT56 AP1B1P2-201ENST00000416196 106 ntBASIC0.23□□□□□ -2.37
CHKB-CPT1BH3BT56 RPL21P111-201ENST00000418453 477 ntBASIC0.23□□□□□ -2.37
CHKB-CPT1BH3BT56 CYCSP49-201ENST00000420810 319 ntBASIC0.23□□□□□ -2.37
CHKB-CPT1BH3BT56 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.23□□□□□ -2.37
CHKB-CPT1BH3BT56 MTND4P6-201ENST00000438297 472 ntBASIC0.23□□□□□ -2.37
CHKB-CPT1BH3BT56 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.23□□□□□ -2.37
CHKB-CPT1BH3BT56 FABP5P15-201ENST00000453566 214 ntBASIC0.23□□□□□ -2.37
CHKB-CPT1BH3BT56 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.23□□□□□ -2.37
CHKB-CPT1BH3BT56 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC0.23□□□□□ -2.37
CHKB-CPT1BH3BT56 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC0.23□□□□□ -2.37
CHKB-CPT1BH3BT56 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.23□□□□□ -2.37
CHKB-CPT1BH3BT56 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.23□□□□□ -2.37
CHKB-CPT1BH3BT56 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC0.23□□□□□ -2.37
CHKB-CPT1BH3BT56 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.23□□□□□ -2.37
CHKB-CPT1BH3BT56 AC091057.3-201ENST00000602684 733 ntBASIC0.23□□□□□ -2.37
CHKB-CPT1BH3BT56 AC009269.6-201ENST00000621778 588 ntBASIC0.23□□□□□ -2.37
CHKB-CPT1BH3BT56 AC130454.1-201ENST00000622948 401 ntBASIC0.23□□□□□ -2.37
CHKB-CPT1BH3BT56 AC090617.9-201ENST00000623751 147 ntBASIC0.23□□□□□ -2.37
CHKB-CPT1BH3BT56 ELL2P3-201ENST00000457883 1602 ntBASIC0.23□□□□□ -2.37
CHKB-CPT1BH3BT56 AC233981.2-201ENST00000611524 1614 ntBASIC0.23□□□□□ -2.37
CHKB-CPT1BH3BT56 DBF4P1-201ENST00000412976 1892 ntBASIC0.22□□□□□ -2.37
CHKB-CPT1BH3BT56 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
CHKB-CPT1BH3BT56 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
CHKB-CPT1BH3BT56 RNU6-1167P-201ENST00000363227 94 ntBASIC0.22□□□□□ -2.37
CHKB-CPT1BH3BT56 RNU6-944P-201ENST00000364023 107 ntBASIC0.22□□□□□ -2.37
CHKB-CPT1BH3BT56 MIR200A-201ENST00000384875 90 ntBASIC0.22□□□□□ -2.37
CHKB-CPT1BH3BT56 MIR186-201ENST00000384988 86 ntBASIC0.22□□□□□ -2.37
CHKB-CPT1BH3BT56 RNU2-28P-201ENST00000410457 189 ntBASIC0.22□□□□□ -2.37
CHKB-CPT1BH3BT56 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.22□□□□□ -2.37
CHKB-CPT1BH3BT56 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.22□□□□□ -2.37
CHKB-CPT1BH3BT56 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.22□□□□□ -2.37
CHKB-CPT1BH3BT56 AC092170.1-201ENST00000440211 356 ntBASIC0.22□□□□□ -2.37
CHKB-CPT1BH3BT56 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.22□□□□□ -2.37
CHKB-CPT1BH3BT56 VN1R10P-201ENST00000447106 875 ntBASIC0.22□□□□□ -2.37
CHKB-CPT1BH3BT56 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.22□□□□□ -2.37
CHKB-CPT1BH3BT56 AC002350.1-201ENST00000490759 375 ntBASIC0.22□□□□□ -2.37
CHKB-CPT1BH3BT56 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC0.22□□□□□ -2.37
CHKB-CPT1BH3BT56 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.22□□□□□ -2.37
CHKB-CPT1BH3BT56 RN7SKP256-201ENST00000517201 314 ntBASIC0.22□□□□□ -2.37
CHKB-CPT1BH3BT56 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC0.22□□□□□ -2.37
CHKB-CPT1BH3BT56 AC087897.1-201ENST00000550134 156 ntBASIC0.22□□□□□ -2.37
CHKB-CPT1BH3BT56 MIR5094-201ENST00000578766 85 ntBASIC0.22□□□□□ -2.37
CHKB-CPT1BH3BT56 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC0.22□□□□□ -2.37
CHKB-CPT1BH3BT56 AL161798.1-201ENST00000604630 131 ntBASIC0.22□□□□□ -2.37
CHKB-CPT1BH3BT56 AL139344.1-201ENST00000605228 195 ntBASIC0.22□□□□□ -2.37
CHKB-CPT1BH3BT56 AC009237.15-201ENST00000610252 501 ntBASIC0.22□□□□□ -2.37
CHKB-CPT1BH3BT56 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
CHKB-CPT1BH3BT56 uc_338.15-201ENST00000615470 191 ntBASIC0.22□□□□□ -2.37
CHKB-CPT1BH3BT56 AC018926.1-201ENST00000616335 435 ntBASIC0.22□□□□□ -2.37
CHKB-CPT1BH3BT56 AC013470.4-201ENST00000619978 986 ntBASIC0.22□□□□□ -2.37
CHKB-CPT1BH3BT56 AC093648.1-201ENST00000623546 606 ntBASIC0.22□□□□□ -2.37
CHKB-CPT1BH3BT56 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.22□□□□□ -2.37
CHKB-CPT1BH3BT56 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
CHKB-CPT1BH3BT56 RNU6-1010P-201ENST00000362757 107 ntBASIC0.21□□□□□ -2.38
CHKB-CPT1BH3BT56 RNU6-637P-201ENST00000384050 107 ntBASIC0.21□□□□□ -2.38
CHKB-CPT1BH3BT56 SNORA50A-201ENST00000384225 134 ntBASIC0.21□□□□□ -2.38
CHKB-CPT1BH3BT56 RNU6-17P-201ENST00000384245 107 ntBASIC0.21□□□□□ -2.38
CHKB-CPT1BH3BT56 RNU6-18P-201ENST00000384527 107 ntBASIC0.21□□□□□ -2.38
CHKB-CPT1BH3BT56 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC0.21□□□□□ -2.38
CHKB-CPT1BH3BT56 CYCSP33-201ENST00000414485 327 ntBASIC0.21□□□□□ -2.38
CHKB-CPT1BH3BT56 LUZP4P1-201ENST00000415420 344 ntBASIC0.21□□□□□ -2.38
CHKB-CPT1BH3BT56 MTATP6P27-201ENST00000416987 621 ntBASIC0.21□□□□□ -2.38
CHKB-CPT1BH3BT56 BTF3L4P3-201ENST00000418879 476 ntBASIC0.21□□□□□ -2.38
CHKB-CPT1BH3BT56 AC063976.4-201ENST00000421971 163 ntBASIC0.21□□□□□ -2.38
CHKB-CPT1BH3BT56 RPL36AP53-201ENST00000432891 316 ntBASIC0.21□□□□□ -2.38
CHKB-CPT1BH3BT56 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC0.21□□□□□ -2.38
CHKB-CPT1BH3BT56 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC0.21□□□□□ -2.38
CHKB-CPT1BH3BT56 MTCO2P25-201ENST00000447065 681 ntBASIC0.21□□□□□ -2.38
CHKB-CPT1BH3BT56 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.21□□□□□ -2.38
CHKB-CPT1BH3BT56 RNU7-95P-201ENST00000459222 64 ntBASIC0.21□□□□□ -2.38
CHKB-CPT1BH3BT56 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.21□□□□□ -2.38
CHKB-CPT1BH3BT56 AC098869.1-201ENST00000481627 292 ntBASIC0.21□□□□□ -2.38
CHKB-CPT1BH3BT56 RPS3AP22-201ENST00000488297 769 ntBASIC0.21□□□□□ -2.38
CHKB-CPT1BH3BT56 RNU6-965P-201ENST00000516721 96 ntBASIC0.21□□□□□ -2.38
CHKB-CPT1BH3BT56 RNA5SP437-201ENST00000517249 129 ntBASIC0.21□□□□□ -2.38
CHKB-CPT1BH3BT56 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.21□□□□□ -2.38
CHKB-CPT1BH3BT56 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.21□□□□□ -2.38
CHKB-CPT1BH3BT56 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.21□□□□□ -2.38
CHKB-CPT1BH3BT56 AC004812.1-201ENST00000540773 146 ntBASIC0.21□□□□□ -2.38
CHKB-CPT1BH3BT56 AC018659.1-201ENST00000551083 169 ntBASIC0.21□□□□□ -2.38
CHKB-CPT1BH3BT56 AC023824.3-201ENST00000569003 562 ntBASIC0.21□□□□□ -2.38
CHKB-CPT1BH3BT56 AC009977.1-201ENST00000586015 570 ntBASIC0.21□□□□□ -2.38
CHKB-CPT1BH3BT56 AC112220.2-201ENST00000605513 533 ntBASIC0.21□□□□□ -2.38
CHKB-CPT1BH3BT56 AC013412.1-201ENST00000610687 192 ntBASIC0.21□□□□□ -2.38
CHKB-CPT1BH3BT56 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.21□□□□□ -2.38
CHKB-CPT1BH3BT56 AC106858.1-201ENST00000637497 429 ntBASIC0.21□□□□□ -2.38
CHKB-CPT1BH3BT56 AC099063.3-201ENST00000642066 185 ntBASIC0.21□□□□□ -2.38
CHKB-CPT1BH3BT56 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
CHKB-CPT1BH3BT56 AL391994.1-201ENST00000254724 282 ntBASIC0.2□□□□□ -2.38
CHKB-CPT1BH3BT56 AL391987.6-201ENST00000305671 199 ntBASIC0.2□□□□□ -2.38
CHKB-CPT1BH3BT56 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
CHKB-CPT1BH3BT56 Y_RNA.124-201ENST00000363339 93 ntBASIC0.2□□□□□ -2.38
CHKB-CPT1BH3BT56 RNU6-743P-201ENST00000364151 106 ntBASIC0.2□□□□□ -2.38
CHKB-CPT1BH3BT56 SNORD114-6-201ENST00000364393 72 ntBASIC0.2□□□□□ -2.38
CHKB-CPT1BH3BT56 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.2□□□□□ -2.38
CHKB-CPT1BH3BT56 SNORA18.2-201ENST00000383865 132 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms