Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 RNU6-778P-201ENST00000363269 103 ntBASIC2□□□□□ -2.09
TMX2-CTNND1H3BSU7 RNU4-75P-201ENST00000364621 146 ntBASIC2□□□□□ -2.09
TMX2-CTNND1H3BSU7 RNU6-817P-201ENST00000391083 104 ntBASIC2□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC127391.1-201ENST00000411737 98 ntBASIC2□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC023141.4-201ENST00000412031 328 ntBASIC2□□□□□ -2.09
TMX2-CTNND1H3BSU7 RPS12P24-201ENST00000412619 387 ntBASIC2□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2□□□□□ -2.09
TMX2-CTNND1H3BSU7 MED13P1-201ENST00000428342 171 ntBASIC2□□□□□ -2.09
TMX2-CTNND1H3BSU7 AL590383.1-201ENST00000428602 75 ntBASIC2□□□□□ -2.09
TMX2-CTNND1H3BSU7 DLGAP5P1-201ENST00000430307 464 ntBASIC2□□□□□ -2.09
TMX2-CTNND1H3BSU7 MTCO2P11-201ENST00000431069 680 ntBASIC2□□□□□ -2.09
TMX2-CTNND1H3BSU7 RPL23AP30-201ENST00000432419 501 ntBASIC2□□□□□ -2.09
TMX2-CTNND1H3BSU7 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC119618.1-201ENST00000434191 222 ntBASIC2□□□□□ -2.09
TMX2-CTNND1H3BSU7 AL445687.1-201ENST00000439946 251 ntBASIC2□□□□□ -2.09
TMX2-CTNND1H3BSU7 DDX3P2-201ENST00000446138 111 ntBASIC2□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC132479.1-201ENST00000449160 144 ntBASIC2□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2□□□□□ -2.09
TMX2-CTNND1H3BSU7 HMGN2P23-201ENST00000456759 269 ntBASIC2□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2□□□□□ -2.09
TMX2-CTNND1H3BSU7 RPS29P20-201ENST00000489592 171 ntBASIC2□□□□□ -2.09
TMX2-CTNND1H3BSU7 RPL39P36-201ENST00000490784 156 ntBASIC2□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC139453.3-201ENST00000493276 369 ntBASIC2□□□□□ -2.09
TMX2-CTNND1H3BSU7 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2□□□□□ -2.09
TMX2-CTNND1H3BSU7 RNU6-703P-201ENST00000516946 107 ntBASIC2□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC087883.1-201ENST00000551882 391 ntBASIC2□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC024909.2-201ENST00000553035 286 ntBASIC2□□□□□ -2.09
TMX2-CTNND1H3BSU7 NDUFAF4P1-201ENST00000559425 519 ntBASIC2□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC137800.2-201ENST00000574375 120 ntBASIC2□□□□□ -2.09
TMX2-CTNND1H3BSU7 LRRC37A5P-203ENST00000580181 585 ntBASIC2□□□□□ -2.09
TMX2-CTNND1H3BSU7 MIR3682-201ENST00000581338 84 ntBASIC2□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC011494.1-201ENST00000596454 237 ntBASIC2□□□□□ -2.09
TMX2-CTNND1H3BSU7 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2□□□□□ -2.09
TMX2-CTNND1H3BSU7 AL670379.6-201ENST00000603753 252 ntBASIC2□□□□□ -2.09
TMX2-CTNND1H3BSU7 AL670379.11-201ENST00000604059 253 ntBASIC2□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC008162.1-201ENST00000604718 254 ntBASIC2□□□□□ -2.09
TMX2-CTNND1H3BSU7 AL670379.1-201ENST00000604752 252 ntBASIC2□□□□□ -2.09
TMX2-CTNND1H3BSU7 AL670379.5-201ENST00000605253 252 ntBASIC2□□□□□ -2.09
TMX2-CTNND1H3BSU7 AL670379.12-201ENST00000605291 253 ntBASIC2□□□□□ -2.09
TMX2-CTNND1H3BSU7 AL670379.8-201ENST00000605353 252 ntBASIC2□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC004805.2-201ENST00000605382 482 ntBASIC2□□□□□ -2.09
TMX2-CTNND1H3BSU7 AL670379.7-201ENST00000605823 252 ntBASIC2□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC109347.2-201ENST00000610220 349 ntBASIC2□□□□□ -2.09
TMX2-CTNND1H3BSU7 AL589743.7-201ENST00000612637 233 ntBASIC2□□□□□ -2.09
TMX2-CTNND1H3BSU7 AL133173.2-201ENST00000614270 90 ntBASIC2□□□□□ -2.09
TMX2-CTNND1H3BSU7 AL589994.2-201ENST00000621124 579 ntBASIC2□□□□□ -2.09
TMX2-CTNND1H3BSU7 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC093648.1-201ENST00000623546 606 ntBASIC2□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC092656.1-203ENST00000624134 423 ntBASIC2□□□□□ -2.09
TMX2-CTNND1H3BSU7 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2□□□□□ -2.09
TMX2-CTNND1H3BSU7 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2□□□□□ -2.09
TMX2-CTNND1H3BSU7 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 RNU6-181P-201ENST00000363225 107 ntBASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 Y_RNA.159-201ENST00000363674 87 ntBASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 Y_RNA.194-201ENST00000363985 102 ntBASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 SNORA4.3-201ENST00000365564 137 ntBASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 SNORA75B-201ENST00000384053 137 ntBASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 RNU6-198P-201ENST00000384258 104 ntBASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 SNORA24.1-201ENST00000384401 135 ntBASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 AL023284.1-201ENST00000403956 276 ntBASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 AL513475.1-201ENST00000406602 315 ntBASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 BTF3L4P3-201ENST00000418879 476 ntBASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 ELOCP4-201ENST00000420090 333 ntBASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 PIGFP2-201ENST00000421400 651 ntBASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 AL589823.1-201ENST00000429577 183 ntBASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 SNRPEP9-201ENST00000436794 238 ntBASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 AL603825.1-201ENST00000438481 80 ntBASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 DNAJC19P4-201ENST00000440115 345 ntBASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 KLF3P2-201ENST00000465138 268 ntBASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 CKS1BP2-201ENST00000497342 240 ntBASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC138853.1-201ENST00000503549 823 ntBASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 RNU7-51P-201ENST00000516560 62 ntBASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 RN7SKP219-201ENST00000516825 296 ntBASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 RNU6-445P-201ENST00000516949 107 ntBASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC009902.1-201ENST00000519351 183 ntBASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC011979.2-201ENST00000527568 352 ntBASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 AP002453.2-201ENST00000533503 320 ntBASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 CYCSP26-201ENST00000534107 320 ntBASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 AL359212.1-201ENST00000556608 614 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms