Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 PTGES3P1-201ENST00000439531 483 ntBASIC0.17□□□□□ -2.38
CPSF4LA6NMK7 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.17□□□□□ -2.38
CPSF4LA6NMK7 AL358794.1-201ENST00000445689 381 ntBASIC0.17□□□□□ -2.38
CPSF4LA6NMK7 SNRPGP9-201ENST00000456025 225 ntBASIC0.17□□□□□ -2.38
CPSF4LA6NMK7 SNORD124-201ENST00000459577 104 ntBASIC0.17□□□□□ -2.38
CPSF4LA6NMK7 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.17□□□□□ -2.38
CPSF4LA6NMK7 AC074344.1-201ENST00000512823 224 ntBASIC0.17□□□□□ -2.38
CPSF4LA6NMK7 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.17□□□□□ -2.38
CPSF4LA6NMK7 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC0.17□□□□□ -2.38
CPSF4LA6NMK7 AP003066.2-201ENST00000529375 555 ntBASIC0.17□□□□□ -2.38
CPSF4LA6NMK7 AL590705.4-201ENST00000532209 134 ntBASIC0.17□□□□□ -2.38
CPSF4LA6NMK7 NACAP3-201ENST00000552100 481 ntBASIC0.17□□□□□ -2.38
CPSF4LA6NMK7 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.17□□□□□ -2.38
CPSF4LA6NMK7 ADAM3B-201ENST00000569937 840 ntBASIC0.17□□□□□ -2.38
CPSF4LA6NMK7 AC006270.3-201ENST00000605967 1036 ntBASIC0.17□□□□□ -2.38
CPSF4LA6NMK7 AC107075.1-201ENST00000613695 314 ntBASIC0.17□□□□□ -2.38
CPSF4LA6NMK7 AC017104.5-201ENST00000637647 639 ntBASIC0.17□□□□□ -2.38
CPSF4LA6NMK7 AC023934.1-201ENST00000574529 2389 ntBASIC0.16□□□□□ -2.38
CPSF4LA6NMK7 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
CPSF4LA6NMK7 RNA5SP361-201ENST00000362686 118 ntBASIC0.16□□□□□ -2.38
CPSF4LA6NMK7 RNU6-112P-201ENST00000363599 104 ntBASIC0.16□□□□□ -2.38
CPSF4LA6NMK7 RNU6-670P-201ENST00000364312 104 ntBASIC0.16□□□□□ -2.38
CPSF4LA6NMK7 USP9YP19-201ENST00000412165 485 ntBASIC0.16□□□□□ -2.38
CPSF4LA6NMK7 USP9YP13-201ENST00000417797 480 ntBASIC0.16□□□□□ -2.38
CPSF4LA6NMK7 PTGES3P4-201ENST00000426243 356 ntBASIC0.16□□□□□ -2.38
CPSF4LA6NMK7 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.16□□□□□ -2.38
CPSF4LA6NMK7 UBE2V1P8-201ENST00000437166 265 ntBASIC0.16□□□□□ -2.38
CPSF4LA6NMK7 AC132479.1-201ENST00000449160 144 ntBASIC0.16□□□□□ -2.38
CPSF4LA6NMK7 RPL23AP35-201ENST00000451906 501 ntBASIC0.16□□□□□ -2.38
CPSF4LA6NMK7 MTND2P24-201ENST00000453434 806 ntBASIC0.16□□□□□ -2.38
CPSF4LA6NMK7 RPL30P1-201ENST00000488676 339 ntBASIC0.16□□□□□ -2.38
CPSF4LA6NMK7 AC084024.2-201ENST00000503480 791 ntBASIC0.16□□□□□ -2.38
CPSF4LA6NMK7 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.16□□□□□ -2.38
CPSF4LA6NMK7 RNA5SP436-201ENST00000516020 115 ntBASIC0.16□□□□□ -2.38
CPSF4LA6NMK7 RNA5SP291-201ENST00000517222 105 ntBASIC0.16□□□□□ -2.38
CPSF4LA6NMK7 AC090142.3-201ENST00000519012 385 ntBASIC0.16□□□□□ -2.38
CPSF4LA6NMK7 AC022616.8-201ENST00000533569 253 ntBASIC0.16□□□□□ -2.38
CPSF4LA6NMK7 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.16□□□□□ -2.38
CPSF4LA6NMK7 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC0.16□□□□□ -2.38
CPSF4LA6NMK7 AC012213.3-201ENST00000577199 777 ntBASIC0.16□□□□□ -2.38
CPSF4LA6NMK7 SNORD39.3-201ENST00000584451 71 ntBASIC0.16□□□□□ -2.38
CPSF4LA6NMK7 AC022432.1-201ENST00000595739 310 ntBASIC0.16□□□□□ -2.38
CPSF4LA6NMK7 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.16□□□□□ -2.38
CPSF4LA6NMK7 KATNBL1P5-201ENST00000605015 517 ntBASIC0.16□□□□□ -2.38
CPSF4LA6NMK7 AL583856.2-201ENST00000606298 543 ntBASIC0.16□□□□□ -2.38
CPSF4LA6NMK7 AC096772.1-201ENST00000609146 564 ntBASIC0.16□□□□□ -2.38
CPSF4LA6NMK7 AC090970.3-201ENST00000612566 866 ntBASIC0.16□□□□□ -2.38
CPSF4LA6NMK7 AL132822.1-201ENST00000617063 513 ntBASIC0.16□□□□□ -2.38
CPSF4LA6NMK7 AC104820.1-201ENST00000624183 307 ntBASIC0.16□□□□□ -2.38
CPSF4LA6NMK7 MIR6516-201ENST00000630554 81 ntBASIC0.16□□□□□ -2.38
CPSF4LA6NMK7 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.16□□□□□ -2.38
CPSF4LA6NMK7 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.15□□□□□ -2.39
CPSF4LA6NMK7 RNU6-611P-201ENST00000384276 104 ntBASIC0.15□□□□□ -2.39
CPSF4LA6NMK7 RNU6-296P-201ENST00000384608 107 ntBASIC0.15□□□□□ -2.39
CPSF4LA6NMK7 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.15□□□□□ -2.39
CPSF4LA6NMK7 AL669831.1-202ENST00000428504 417 ntBASIC0.15□□□□□ -2.39
CPSF4LA6NMK7 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.15□□□□□ -2.39
CPSF4LA6NMK7 MTND2P4-201ENST00000445034 1004 ntBASIC0.15□□□□□ -2.39
CPSF4LA6NMK7 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0.15□□□□□ -2.39
CPSF4LA6NMK7 MTND1P16-201ENST00000465177 898 ntBASIC0.15□□□□□ -2.39
CPSF4LA6NMK7 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.15□□□□□ -2.39
CPSF4LA6NMK7 ZNF705CP-201ENST00000530515 889 ntBASIC0.15□□□□□ -2.39
CPSF4LA6NMK7 AC016957.1-201ENST00000534895 309 ntBASIC0.15□□□□□ -2.39
CPSF4LA6NMK7 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC0.15□□□□□ -2.39
CPSF4LA6NMK7 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC0.15□□□□□ -2.39
CPSF4LA6NMK7 AC004067.1-201ENST00000608733 700 ntBASIC0.15□□□□□ -2.39
CPSF4LA6NMK7 AC104465.1-201ENST00000611365 139 ntBASIC0.15□□□□□ -2.39
CPSF4LA6NMK7 AC024257.5-201ENST00000612739 531 ntBASIC0.15□□□□□ -2.39
CPSF4LA6NMK7 AC080188.3-201ENST00000624842 748 ntBASIC0.15□□□□□ -2.39
CPSF4LA6NMK7 AC017037.3-201ENST00000625016 472 ntBASIC0.15□□□□□ -2.39
CPSF4LA6NMK7 SNORD114-24-201ENST00000365029 72 ntBASIC0.14□□□□□ -2.39
CPSF4LA6NMK7 RNU6-1065P-201ENST00000384513 106 ntBASIC0.14□□□□□ -2.39
CPSF4LA6NMK7 RPS3AP1-201ENST00000413190 320 ntBASIC0.14□□□□□ -2.39
CPSF4LA6NMK7 PPP1R11P2-201ENST00000423543 382 ntBASIC0.14□□□□□ -2.39
CPSF4LA6NMK7 AC010099.3-201ENST00000423896 409 ntBASIC0.14□□□□□ -2.39
CPSF4LA6NMK7 VN1R42P-201ENST00000424651 344 ntBASIC0.14□□□□□ -2.39
CPSF4LA6NMK7 GTF2IP13-201ENST00000438487 386 ntBASIC0.14□□□□□ -2.39
CPSF4LA6NMK7 AC112771.1-201ENST00000463581 102 ntBASIC0.14□□□□□ -2.39
CPSF4LA6NMK7 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.14□□□□□ -2.39
CPSF4LA6NMK7 RNA5SP220-201ENST00000516298 104 ntBASIC0.14□□□□□ -2.39
CPSF4LA6NMK7 RN7SKP88-201ENST00000516847 250 ntBASIC0.14□□□□□ -2.39
CPSF4LA6NMK7 AP000763.2-201ENST00000540641 163 ntBASIC0.14□□□□□ -2.39
CPSF4LA6NMK7 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.14□□□□□ -2.39
CPSF4LA6NMK7 PSMA3P-201ENST00000555485 635 ntBASIC0.14□□□□□ -2.39
CPSF4LA6NMK7 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.14□□□□□ -2.39
CPSF4LA6NMK7 AC018618.2-201ENST00000604770 446 ntBASIC0.14□□□□□ -2.39
CPSF4LA6NMK7 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.14□□□□□ -2.39
CPSF4LA6NMK7 7SK.8-201ENST00000612110 250 ntBASIC0.14□□□□□ -2.39
CPSF4LA6NMK7 7SK.11-201ENST00000615477 250 ntBASIC0.14□□□□□ -2.39
CPSF4LA6NMK7 MIR6734-201ENST00000621166 68 ntBASIC0.14□□□□□ -2.39
CPSF4LA6NMK7 7SK.13-201ENST00000622040 250 ntBASIC0.14□□□□□ -2.39
CPSF4LA6NMK7 AC022513.1-201ENST00000624512 117 ntBASIC0.14□□□□□ -2.39
CPSF4LA6NMK7 Z69720.2-201ENST00000624755 279 ntBASIC0.14□□□□□ -2.39
CPSF4LA6NMK7 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.14□□□□□ -2.39
CPSF4LA6NMK7 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.14□□□□□ -2.39
CPSF4LA6NMK7 AC100821.1-201ENST00000523153 2479 ntBASIC0.14□□□□□ -2.39
CPSF4LA6NMK7 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
CPSF4LA6NMK7 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.13□□□□□ -2.39
CPSF4LA6NMK7 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC0.13□□□□□ -2.39
CPSF4LA6NMK7 RNU6-945P-201ENST00000383947 107 ntBASIC0.13□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms